| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is mcp4 [H]
Identifier: 183220875
GI number: 183220875
Start: 1549030
End: 1551135
Strand: Direct
Name: mcp4 [H]
Synonym: LEPBI_I1488
Alternate gene names: 183220875
Gene position: 1549030-1551135 (Clockwise)
Preceding gene: 183220873
Following gene: 183220878
Centisome position: 43.03
GC content: 37.75
Gene sequence:
>2106_bases ATGAAATTCAAATGGGAACCAAATTCGCTACGTACGAAACTCATCAGTTTCACCATTCTTTCTGTCACACTGGCATGTGG GTTAACAGGTTTTTTGAGTTATTATGTTGGGAGAAGTACGATTATCTCCAAATTGGAAAGTTTTGATATGGTGAAAATCC TAGAATCCAAGTCAGCCACCATTGATTCCATTTTAGAACGAACAAAAGAGACGGCAGTGTTAGTTGCCTCCGACCACAAT ACCATCCGCTGGGCAAAATCGGGTGAACCCAAAGGAGACGCAACAGAGCAGGTCTTTCAGAATTTATCCACTTACAAATC AAAATTAAGTTATATCACTTACTTTGGCATCATCAATCCACTTACTAAAAACTACTGGAATGAATCAGGAAAAAAAATTG ATACCCTAACTGAAAAGGATTCGGATGACAGTTGGTTTTTTGATCTCATTCACTCTAAAAAAGATTTGGTGATCAATATG GATTATACGGAGGAGTATAAATCATATGCCATTTTTGTAAATGGTGTTACGCTTGAAAATGGGAACCCCGTGCTCATTAG CTCCATCGGTATTGATGTTTCGGTGGCTTCTAAACAATTTACCCAAATCGATCAGTTTGGTGGTGAGAGTTGGTTAGTGG ATAGTCGAGGGATCATCCAATTAGCATTGGATAGTAATCTTCTCGAAAAGGAATTAAATTTTAGTTTCCCGGATGAAGTT GTATCCCAATTGAAAAATACGACAGATTCGATACGTATCTTTTCAGGAAAGGATTCTTTAGGTAACAATTGCCTTTACGG AAGTTACCAATTGCATTCTGTACCTTGGCGTGTGATTTATCGTGTTCCTGTATCGGCAATGACAAAATCTCTCGATTCCA TCGCAATTTTTACCTTCGTTAGCATTCTATTTTCAGTTGTTCTTGTATCCATAGGAATGGGTTATGTGTTAACCAAAGTG ACACATGCCATACGGGAAGCTTCACTTCTCATGAATCGTATTTCTCATAATGAATTGTCTTTCGAAGTTCCGAAAAACCA ATTAGAAAGAAATGATGAGATCGGAGGTATGGCAAAAAGTTTAGAAAAAATGCGTCAAAATTTAACTGTGATTGTTCAAA AAATTCAAAATCTTTCTGAATCGATCACTGGAAAAAGTTCCCAGTTATCGTCACTCGCATCAGATTCATCTGCAACCATT GAAGAGATTGCCTCTTCTGTCCAAGAACTTTCCGCGAGTGCTGAAAATGTTTCTGCTTCGGCAGAAGAAATTTCATCTCA ATCCAATTCGATGATTGAAACTTTAAATCTGCTTGGAAGTGAAATGGAGTTGGTATCCAAGGGAGCAGAAAAGATTGAAG GAAAAGCAAGCGAGCTTGAATCATTTGTTGGAAAATCCTTGTTAGATGCCAAATCTTTATTTGAAACAATCAATCTTAAA ATTCAAAATGCGGTGAAAGATGCCGAAGCGATCAAAGAGATACGTGAGTTAGCAAGTATGATCGCAGAAATTGGTGACCA AACCAACTTGCTTTCGTTAAATGCTGCAATTGAAGCGGCACGGGCTGGTGAACATGGAAGGGGATTTGCTGTCGTTGCGA CAGAGGTTTCCAATTTAGCAGGAAAGTCGCAAGAAACTGTAAAAAAAATTGTAGAACTCAATCATAAATTAGAAAAAGCA ATGGTGGATATGGTTGATTCGGTGAAAGAACTTTTGAATATGATCACAGGAAAAGTGATACCTGATTATGAAGGTGTCGT CGCTTCTGGAAAAGAATATAAAATCCAGTCAGAAGAAATCTATACCCTTGCCAAACGGACATTTAACTTAGCAAAAGAGA TCAGTAATAGCATTAGTGAAGTGCACCATGCAATTATATCTGTATCCGAAGCAATGAACCAAAATGCCCTGGCATTAGGG GAAATAAGCTCGGGTACCAATCAGATGAGTGAGGTCTCAATGCAAACGGCCGATAGTTCTTCTGAATTAAACCAAACTGC AATTGACATGAAAGAAATTGCCTATCAGTTTAAATTGATTTTATTTGATTTTTTCCTCGATCAGTTTTTTAATTTTTTCC ATGGATGGTTTGTTGGCATCATCTAA
Upstream 100 bases:
>100_bases TTATCATGGTTGAAACCAAAAATGTGAGAACACTTTATACATTCATCTTACATTTAGCAAGAAAACATTCTAAATATCGA AAAGAAAGGATTCAAAAATC
Downstream 100 bases:
>100_bases GGCAGAGTATCCTAAAAAATTTCGATGAAGGACATTTGCATTGGCTTGGATGAGAAATTCTGCAACGTCCATTTGTTGGT TCCGAACGGACAACATAAAA
Product: putative methyl-accepting chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 701; Mature: 701
Protein sequence:
>701_residues MKFKWEPNSLRTKLISFTILSVTLACGLTGFLSYYVGRSTIISKLESFDMVKILESKSATIDSILERTKETAVLVASDHN TIRWAKSGEPKGDATEQVFQNLSTYKSKLSYITYFGIINPLTKNYWNESGKKIDTLTEKDSDDSWFFDLIHSKKDLVINM DYTEEYKSYAIFVNGVTLENGNPVLISSIGIDVSVASKQFTQIDQFGGESWLVDSRGIIQLALDSNLLEKELNFSFPDEV VSQLKNTTDSIRIFSGKDSLGNNCLYGSYQLHSVPWRVIYRVPVSAMTKSLDSIAIFTFVSILFSVVLVSIGMGYVLTKV THAIREASLLMNRISHNELSFEVPKNQLERNDEIGGMAKSLEKMRQNLTVIVQKIQNLSESITGKSSQLSSLASDSSATI EEIASSVQELSASAENVSASAEEISSQSNSMIETLNLLGSEMELVSKGAEKIEGKASELESFVGKSLLDAKSLFETINLK IQNAVKDAEAIKEIRELASMIAEIGDQTNLLSLNAAIEAARAGEHGRGFAVVATEVSNLAGKSQETVKKIVELNHKLEKA MVDMVDSVKELLNMITGKVIPDYEGVVASGKEYKIQSEEIYTLAKRTFNLAKEISNSISEVHHAIISVSEAMNQNALALG EISSGTNQMSEVSMQTADSSSELNQTAIDMKEIAYQFKLILFDFFLDQFFNFFHGWFVGII
Sequences:
>Translated_701_residues MKFKWEPNSLRTKLISFTILSVTLACGLTGFLSYYVGRSTIISKLESFDMVKILESKSATIDSILERTKETAVLVASDHN TIRWAKSGEPKGDATEQVFQNLSTYKSKLSYITYFGIINPLTKNYWNESGKKIDTLTEKDSDDSWFFDLIHSKKDLVINM DYTEEYKSYAIFVNGVTLENGNPVLISSIGIDVSVASKQFTQIDQFGGESWLVDSRGIIQLALDSNLLEKELNFSFPDEV VSQLKNTTDSIRIFSGKDSLGNNCLYGSYQLHSVPWRVIYRVPVSAMTKSLDSIAIFTFVSILFSVVLVSIGMGYVLTKV THAIREASLLMNRISHNELSFEVPKNQLERNDEIGGMAKSLEKMRQNLTVIVQKIQNLSESITGKSSQLSSLASDSSATI EEIASSVQELSASAENVSASAEEISSQSNSMIETLNLLGSEMELVSKGAEKIEGKASELESFVGKSLLDAKSLFETINLK IQNAVKDAEAIKEIRELASMIAEIGDQTNLLSLNAAIEAARAGEHGRGFAVVATEVSNLAGKSQETVKKIVELNHKLEKA MVDMVDSVKELLNMITGKVIPDYEGVVASGKEYKIQSEEIYTLAKRTFNLAKEISNSISEVHHAIISVSEAMNQNALALG EISSGTNQMSEVSMQTADSSSELNQTAIDMKEIAYQFKLILFDFFLDQFFNFFHGWFVGII >Mature_701_residues MKFKWEPNSLRTKLISFTILSVTLACGLTGFLSYYVGRSTIISKLESFDMVKILESKSATIDSILERTKETAVLVASDHN TIRWAKSGEPKGDATEQVFQNLSTYKSKLSYITYFGIINPLTKNYWNESGKKIDTLTEKDSDDSWFFDLIHSKKDLVINM DYTEEYKSYAIFVNGVTLENGNPVLISSIGIDVSVASKQFTQIDQFGGESWLVDSRGIIQLALDSNLLEKELNFSFPDEV VSQLKNTTDSIRIFSGKDSLGNNCLYGSYQLHSVPWRVIYRVPVSAMTKSLDSIAIFTFVSILFSVVLVSIGMGYVLTKV THAIREASLLMNRISHNELSFEVPKNQLERNDEIGGMAKSLEKMRQNLTVIVQKIQNLSESITGKSSQLSSLASDSSATI EEIASSVQELSASAENVSASAEEISSQSNSMIETLNLLGSEMELVSKGAEKIEGKASELESFVGKSLLDAKSLFETINLK IQNAVKDAEAIKEIRELASMIAEIGDQTNLLSLNAAIEAARAGEHGRGFAVVATEVSNLAGKSQETVKKIVELNHKLEKA MVDMVDSVKELLNMITGKVIPDYEGVVASGKEYKIQSEEIYTLAKRTFNLAKEISNSISEVHHAIISVSEAMNQNALALG EISSGTNQMSEVSMQTADSSSELNQTAIDMKEIAYQFKLILFDFFLDQFFNFFHGWFVGII
Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 methyl-accepting transducer domain [H]
Homologues:
Organism=Escherichia coli, GI1788195, Length=248, Percent_Identity=31.0483870967742, Blast_Score=94, Evalue=3e-20, Organism=Escherichia coli, GI1787690, Length=387, Percent_Identity=24.031007751938, Blast_Score=91, Evalue=3e-19, Organism=Escherichia coli, GI2367378, Length=224, Percent_Identity=30.3571428571429, Blast_Score=85, Evalue=2e-17, Organism=Escherichia coli, GI1788194, Length=284, Percent_Identity=27.8169014084507, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1789453, Length=190, Percent_Identity=26.8421052631579, Blast_Score=70, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013163 - InterPro: IPR004090 - InterPro: IPR004089 - InterPro: IPR003660 [H]
Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]
EC number: NA
Molecular weight: Translated: 77488; Mature: 77488
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFKWEPNSLRTKLISFTILSVTLACGLTGFLSYYVGRSTIISKLESFDMVKILESKSAT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH IDSILERTKETAVLVASDHNTIRWAKSGEPKGDATEQVFQNLSTYKSKLSYITYFGIINP HHHHHHHHHHCEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LTKNYWNESGKKIDTLTEKDSDDSWFFDLIHSKKDLVINMDYTEEYKSYAIFVNGVTLEN HHHHHHCCCCCEECHHCCCCCCCHHHHHHHHCCCCEEEECCCHHCCCCEEEEEEEEEEEC GNPVLISSIGIDVSVASKQFTQIDQFGGESWLVDSRGIIQLALDSNLLEKELNFSFPDEV CCEEEEEECCCCEEHHHHHHHHHHHCCCCEEEECCCCEEEEEECCHHHHHHCCCCCHHHH VSQLKNTTDSIRIFSGKDSLGNNCLYGSYQLHSVPWRVIYRVPVSAMTKSLDSIAIFTFV HHHHHCCCCCEEEEECCCCCCCCEEECCEEECCCCEEHEEECCHHHHHHHHHHHHHHHHH SILFSVVLVSIGMGYVLTKVTHAIREASLLMNRISHNELSFEVPKNQLERNDEIGGMAKS HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHCCCCCCHHHHH LEKMRQNLTVIVQKIQNLSESITGKSSQLSSLASDSSATIEEIASSVQELSASAENVSAS HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH AEEISSQSNSMIETLNLLGSEMELVSKGAEKIEGKASELESFVGKSLLDAKSLFETINLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH IQNAVKDAEAIKEIRELASMIAEIGDQTNLLSLNAAIEAARAGEHGRGFAVVATEVSNLA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCEEEEEEHHHHHC GKSQETVKKIVELNHKLEKAMVDMVDSVKELLNMITGKVIPDYEGVVASGKEYKIQSEEI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECHHHH YTLAKRTFNLAKEISNSISEVHHAIISVSEAMNQNALALGEISSGTNQMSEVSMQTADSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCH SELNQTAIDMKEIAYQFKLILFDFFLDQFFNFFHGWFVGII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKFKWEPNSLRTKLISFTILSVTLACGLTGFLSYYVGRSTIISKLESFDMVKILESKSAT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH IDSILERTKETAVLVASDHNTIRWAKSGEPKGDATEQVFQNLSTYKSKLSYITYFGIINP HHHHHHHHHHCEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LTKNYWNESGKKIDTLTEKDSDDSWFFDLIHSKKDLVINMDYTEEYKSYAIFVNGVTLEN HHHHHHCCCCCEECHHCCCCCCCHHHHHHHHCCCCEEEECCCHHCCCCEEEEEEEEEEEC GNPVLISSIGIDVSVASKQFTQIDQFGGESWLVDSRGIIQLALDSNLLEKELNFSFPDEV CCEEEEEECCCCEEHHHHHHHHHHHCCCCEEEECCCCEEEEEECCHHHHHHCCCCCHHHH VSQLKNTTDSIRIFSGKDSLGNNCLYGSYQLHSVPWRVIYRVPVSAMTKSLDSIAIFTFV HHHHHCCCCCEEEEECCCCCCCCEEECCEEECCCCEEHEEECCHHHHHHHHHHHHHHHHH SILFSVVLVSIGMGYVLTKVTHAIREASLLMNRISHNELSFEVPKNQLERNDEIGGMAKS HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHCCCCCCHHHHH LEKMRQNLTVIVQKIQNLSESITGKSSQLSSLASDSSATIEEIASSVQELSASAENVSAS HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH AEEISSQSNSMIETLNLLGSEMELVSKGAEKIEGKASELESFVGKSLLDAKSLFETINLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH IQNAVKDAEAIKEIRELASMIAEIGDQTNLLSLNAAIEAARAGEHGRGFAVVATEVSNLA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCEEEEEEHHHHHC GKSQETVKKIVELNHKLEKAMVDMVDSVKELLNMITGKVIPDYEGVVASGKEYKIQSEEI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECHHHH YTLAKRTFNLAKEISNSISEVHHAIISVSEAMNQNALALGEISSGTNQMSEVSMQTADSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCH SELNQTAIDMKEIAYQFKLILFDFFLDQFFNFFHGWFVGII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]