Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220590
Identifier: 183220590
GI number: 183220590
Start: 1244375
End: 1246348
Strand: Direct
Name: 183220590
Synonym: LEPBI_I1194
Alternate gene names: NA
Gene position: 1244375-1246348 (Clockwise)
Preceding gene: 183220589
Following gene: 183220591
Centisome position: 34.57
GC content: 36.07
Gene sequence:
>1974_bases GTGAGCCAATCTTCGGATTTCAAATACATCATCACGGATGACCCCTTTTTTGAAGGTAAAATTGCCGATTATTCTAAAAA ACTAAAAACGAATGTTCTTTCTTTATCGGAACTGCTAACAACGGATTTTGATTCACAAGGAAAAATCATCAAAGTATTAT TTTACATCTCGCGATTCGAGTTGGAAAATAAACACAAAGAGATCCATCAATTTTTAAAAGTACATCCAACCATTATGTCG AACATCATCGTTCGTGCACCTATCGACTACACTGGTTATATGGCACTCTCAATCGAGGAAGACTTATTTTTTACCAATGT CCCTGACGATGCACCTTTGGTATTCCTTATCAAAAATTTGATCAATGCCTTTACCAGCTTACAAATGATCGTTGATAAGT TTGAACTTCAAAAACGGATTAATGTCTCTACAAATGAAATTTCGAAATTAACAAAAATTGGAATCAGTCTTGCGAACGAA AAAGATTTCACAAAACTACTCCGTGATATTTTGAATTCTGCTCGTGAAATTTCCAACTCGGATTCAGGGTCATTGTATTT GGTTGAAAAAGATGAAAGAGGTAATCCCAGAAATTTAAGATTTAAAATTTCAGCCTTGGATCTGAATAGTGATGAATTCA TTTTACCAATTAATAAAAAAAGTATCGCGGGATACGTTGCATTTACTGGGAAACAATTAAACATCCCGAATGTTTATGAA CTTTCAGGAAAGGAAGAATATAAATTCAATAGCGATTTTGATCGAATGAGTAATTATTACTCCAAATCAATGTTAGTGGT TCCAATGAAAGACCACCATGATGAAGTTGTTGGTGTTATCCAACTCATCAATCGCAAAAAAAACTTCCAAACCAAACTTA GTTTAGAAGAGATGAAAACCAATTCAGTATTGGAATATGATAAATATTCGGAAGAATTGGTGATGGCAGTGGCGGGTCAA GCGGCCGTTGCCATCCAAAACAATAATTTGGTTCATGACATCGAAACTTTGTTTGAAGGGTTTGTGACCGCAAGTGTTTC GGCCATTGAATCGAGGGATCCCACTACCTCAGGTCATTCGTTTCGAGTGGCACAATATACAGTGGGTCTTGCTGAATCAG TTAATAGTGTACAAGTAGGCCGATTCAAAGATGTCAATTTTAATGAATCTCAAATCAAAGAAATTCGTTATGCATCATTA TTACATGATTTTGGAAAAGTTGGAGTTAGGGAAAAAGTTTTAGTCAAAGCCAAAAAATTGGAAGACTATGAAATGGATCT CATCCGATGGAGATTCCAATTCATTTTAAAAGATGTCGAAGCAAAACTATCTCAAAAGAAAATTGATTACTTAAAAAAAC ACGGTAACAATGGTTACCCACAATTTGAAAAATCCATCCAATTGGAATATGCCTTAGAAAAAGGAAAATTGGAAGAGATG GTACGTGTCATTACTGATTCCAACGAACCAACCATTTTAGAAGAAGGAAACTCAAACTTTTTAGAAGAAATTTCAAAGAT GAGTTACCATACAACTGATGGAAACCAATTGAGTTTACTTTTGCCAAAAGAGTTCGGTTTTTTATCGATCAGACGTGGAT CTCTCGATTTTGAAGAAAGAAGGGAAATTGAATCCCACGTTGAACATACATTCCAATTTTTATCCAAAATCCCATGGACA CGTGAATTAAAAATGGTTCCAAGCATAGCGCATGGTCACCATGAAAAATTGAATGGTTCTGGTTACCCTCGTGGTTTGTC TGCTGTCGAAATTCCAGTGCAGGCAAAAATGATGGCCATTGCCGATATTTTTGATGCTCTCACGGACCAAGATCGACCTT ATAAAAAAGCAGTGCCCTTGGACCGTGCATTTGATATCCTCAAAATGGAAGTGAGGGACCAACACATCGATGGTGACCTT CTCGATCTATTCATTGAAAGTCGTGCTTACGAAAAAATTCAGCACAAACGATAA
Upstream 100 bases:
>100_bases AAGTTTGGTTTTTGGGGTTCTACTTCTCTTCAAACCAAAGTCAGAGTAAATTTTTGAAAAAACAATCGACAGTGAATTTT TTGCTGTCGATAGTATATCC
Downstream 100 bases:
>100_bases AAAAAACCTGAAAAAAAGTTCGTCTTTTAAAGCACCTCCGAAACTTCTGTGTCTAAGCACTAGGAGGAGATATGAACCAA ACTCTAAAAGGTCGTACTGT
Product: hypothetical protein
Products: nucleoside 5'-phosphate
Alternate protein names: Metal-Dependent Phosphohydrolase; Response Regulator; Chemotaxis Sensory Transducer Family Protein; HAMP Domain Protein; GAF Domain-Containing Protein; HD-GYP Domain-Containing Protein; Response Regulator Receiver; Methyl-Accepting Chemotaxis Protein; PAS/PAC Sensor Protein; HD-Domain-Containing Protein; GAF Domain/HD Domain-Containing Protein; GAF Domain Protein; Chemotactic Transducer-Related Protein; Response Regulator Receiver Protein; Sensor Histidine Kinase; Response Regulator CheB; HD Domain-Containing Protein; Pas/Pac Sensor Protein; Two-Component Response Regulator; ABC-Type Amino Acid Transport Signal Transduction Systems; HAMP Domain/GAF Domain/HD Domain-Containing Protein; Metal Dependent Phosphohydrolase With Gaf Sensor; HD-GYP/GAF Domain-Containing Protein; Hamp Domain/Gaf Domain/Hd Domain Protein; 3 5'-Cyclic-Nucleotide Phosphodiesterase; GAF Domain/HD Domain Protein; GAF Containing Protein; Diguanylate Cyclase; Replicative DNA Helicase; HD_GYP Domain-Containing Response Regulator; Metal Dependent Phophohydrolase; Two-Component System Response Regulator Protein; Two-Component Regulatory System Response Regulator; Sensor Histidine Kinase/GAF Domain-Containing Protein; Metal-Dependent Phosphohydrolase HD Region; Metal-Dependent Phosphohydrolase Hd Subdomain; Diguanylate Cyclase And Metal Dependent Phosphohydrolase; HD-Hydrolase Domain-Containing Protein; Integral Membrane Protein Two-Component Signal Transducer; HAMP Domain-Containing Protein; Fused HD-GYP/HD-Hydrolase Domain-Containing Protein; Two-Component System Response Regulator; HD Domain Protein; Response Regulator/Phosphatase; Two-Component Hybrid Sensor And Regulator Protein; Signaling Protein; Chemotaxis Protein; Response Regulator With HD-GYP Domain; Metal Dependent Phosphohydrolase HD Region; Diguanylate Cyclase With GAF Sensor; Two-Component Response Regulator Fusion Protein; Response Regulator Containing A CheY-Like Receiver Domain; Multi-Sensor Signal Transduction Histidine Kinase
Number of amino acids: Translated: 657; Mature: 656
Protein sequence:
>657_residues MSQSSDFKYIITDDPFFEGKIADYSKKLKTNVLSLSELLTTDFDSQGKIIKVLFYISRFELENKHKEIHQFLKVHPTIMS NIIVRAPIDYTGYMALSIEEDLFFTNVPDDAPLVFLIKNLINAFTSLQMIVDKFELQKRINVSTNEISKLTKIGISLANE KDFTKLLRDILNSAREISNSDSGSLYLVEKDERGNPRNLRFKISALDLNSDEFILPINKKSIAGYVAFTGKQLNIPNVYE LSGKEEYKFNSDFDRMSNYYSKSMLVVPMKDHHDEVVGVIQLINRKKNFQTKLSLEEMKTNSVLEYDKYSEELVMAVAGQ AAVAIQNNNLVHDIETLFEGFVTASVSAIESRDPTTSGHSFRVAQYTVGLAESVNSVQVGRFKDVNFNESQIKEIRYASL LHDFGKVGVREKVLVKAKKLEDYEMDLIRWRFQFILKDVEAKLSQKKIDYLKKHGNNGYPQFEKSIQLEYALEKGKLEEM VRVITDSNEPTILEEGNSNFLEEISKMSYHTTDGNQLSLLLPKEFGFLSIRRGSLDFEERREIESHVEHTFQFLSKIPWT RELKMVPSIAHGHHEKLNGSGYPRGLSAVEIPVQAKMMAIADIFDALTDQDRPYKKAVPLDRAFDILKMEVRDQHIDGDL LDLFIESRAYEKIQHKR
Sequences:
>Translated_657_residues MSQSSDFKYIITDDPFFEGKIADYSKKLKTNVLSLSELLTTDFDSQGKIIKVLFYISRFELENKHKEIHQFLKVHPTIMS NIIVRAPIDYTGYMALSIEEDLFFTNVPDDAPLVFLIKNLINAFTSLQMIVDKFELQKRINVSTNEISKLTKIGISLANE KDFTKLLRDILNSAREISNSDSGSLYLVEKDERGNPRNLRFKISALDLNSDEFILPINKKSIAGYVAFTGKQLNIPNVYE LSGKEEYKFNSDFDRMSNYYSKSMLVVPMKDHHDEVVGVIQLINRKKNFQTKLSLEEMKTNSVLEYDKYSEELVMAVAGQ AAVAIQNNNLVHDIETLFEGFVTASVSAIESRDPTTSGHSFRVAQYTVGLAESVNSVQVGRFKDVNFNESQIKEIRYASL LHDFGKVGVREKVLVKAKKLEDYEMDLIRWRFQFILKDVEAKLSQKKIDYLKKHGNNGYPQFEKSIQLEYALEKGKLEEM VRVITDSNEPTILEEGNSNFLEEISKMSYHTTDGNQLSLLLPKEFGFLSIRRGSLDFEERREIESHVEHTFQFLSKIPWT RELKMVPSIAHGHHEKLNGSGYPRGLSAVEIPVQAKMMAIADIFDALTDQDRPYKKAVPLDRAFDILKMEVRDQHIDGDL LDLFIESRAYEKIQHKR >Mature_656_residues SQSSDFKYIITDDPFFEGKIADYSKKLKTNVLSLSELLTTDFDSQGKIIKVLFYISRFELENKHKEIHQFLKVHPTIMSN IIVRAPIDYTGYMALSIEEDLFFTNVPDDAPLVFLIKNLINAFTSLQMIVDKFELQKRINVSTNEISKLTKIGISLANEK DFTKLLRDILNSAREISNSDSGSLYLVEKDERGNPRNLRFKISALDLNSDEFILPINKKSIAGYVAFTGKQLNIPNVYEL SGKEEYKFNSDFDRMSNYYSKSMLVVPMKDHHDEVVGVIQLINRKKNFQTKLSLEEMKTNSVLEYDKYSEELVMAVAGQA AVAIQNNNLVHDIETLFEGFVTASVSAIESRDPTTSGHSFRVAQYTVGLAESVNSVQVGRFKDVNFNESQIKEIRYASLL HDFGKVGVREKVLVKAKKLEDYEMDLIRWRFQFILKDVEAKLSQKKIDYLKKHGNNGYPQFEKSIQLEYALEKGKLEEMV RVITDSNEPTILEEGNSNFLEEISKMSYHTTDGNQLSLLLPKEFGFLSIRRGSLDFEERREIESHVEHTFQFLSKIPWTR ELKMVPSIAHGHHEKLNGSGYPRGLSAVEIPVQAKMMAIADIFDALTDQDRPYKKAVPLDRAFDILKMEVRDQHIDGDLL DLFIESRAYEKIQHKR
Specific function: Unknown
COG id: COG2206
COG function: function code T; HD-GYP domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI61744435, Length=152, Percent_Identity=31.5789473684211, Blast_Score=70, Evalue=8e-12, Organism=Homo sapiens, GI61744432, Length=152, Percent_Identity=31.5789473684211, Blast_Score=70, Evalue=9e-12, Organism=Homo sapiens, GI61744430, Length=152, Percent_Identity=31.5789473684211, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI161076955, Length=160, Percent_Identity=28.125, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI161076953, Length=139, Percent_Identity=28.7769784172662, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI281361762, Length=187, Percent_Identity=26.2032085561497, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.4.17
Molecular weight: Translated: 75483; Mature: 75352
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSSDFKYIITDDPFFEGKIADYSKKLKTNVLSLSELLTTDFDSQGKIIKVLFYISRFE CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH LENKHKEIHQFLKVHPTIMSNIIVRAPIDYTGYMALSIEEDLFFTNVPDDAPLVFLIKNL HHHHHHHHHHHHHHCHHHHHCEEEECCCCCCCEEEEEEECCEEEECCCCCCHHHHHHHHH INAFTSLQMIVDKFELQKRINVSTNEISKLTKIGISLANEKDFTKLLRDILNSAREISNS HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC DSGSLYLVEKDERGNPRNLRFKISALDLNSDEFILPINKKSIAGYVAFTGKQLNIPNVYE CCCEEEEEEECCCCCCCCEEEEEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCEEE LSGKEEYKFNSDFDRMSNYYSKSMLVVPMKDHHDEVVGVIQLINRKKNFQTKLSLEEMKT CCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHEEHHHHCC NSVLEYDKYSEELVMAVAGQAAVAIQNNNLVHDIETLFEGFVTASVSAIESRDPTTSGHS CCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC FRVAQYTVGLAESVNSVQVGRFKDVNFNESQIKEIRYASLLHDFGKVGVREKVLVKAKKL EEEHHHHHHHHHCCCCEECCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC EDYEMDLIRWRFQFILKDVEAKLSQKKIDYLKKHGNNGYPQFEKSIQLEYALEKGKLEEM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEEEEEHHHHCCHHHH VRVITDSNEPTILEEGNSNFLEEISKMSYHTTDGNQLSLLLPKEFGFLSIRRGSLDFEER HHHHHCCCCCEEEECCCCHHHHHHHHCEEECCCCCEEEEEECCCCCEEEEECCCCCHHHH REIESHVEHTFQFLSKIPWTRELKMVPSIAHGHHEKLNGSGYPRGLSAVEIPVQAKMMAI HHHHHHHHHHHHHHHHCCCCHHHHHCCHHHCCCCCCCCCCCCCCCCCEEECCHHHHHHHH ADIFDALTDQDRPYKKAVPLDRAFDILKMEVRDQHIDGDLLDLFIESRAYEKIQHKR HHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SQSSDFKYIITDDPFFEGKIADYSKKLKTNVLSLSELLTTDFDSQGKIIKVLFYISRFE CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH LENKHKEIHQFLKVHPTIMSNIIVRAPIDYTGYMALSIEEDLFFTNVPDDAPLVFLIKNL HHHHHHHHHHHHHHCHHHHHCEEEECCCCCCCEEEEEEECCEEEECCCCCCHHHHHHHHH INAFTSLQMIVDKFELQKRINVSTNEISKLTKIGISLANEKDFTKLLRDILNSAREISNS HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC DSGSLYLVEKDERGNPRNLRFKISALDLNSDEFILPINKKSIAGYVAFTGKQLNIPNVYE CCCEEEEEEECCCCCCCCEEEEEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCEEE LSGKEEYKFNSDFDRMSNYYSKSMLVVPMKDHHDEVVGVIQLINRKKNFQTKLSLEEMKT CCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHEEHHHHCC NSVLEYDKYSEELVMAVAGQAAVAIQNNNLVHDIETLFEGFVTASVSAIESRDPTTSGHS CCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC FRVAQYTVGLAESVNSVQVGRFKDVNFNESQIKEIRYASLLHDFGKVGVREKVLVKAKKL EEEHHHHHHHHHCCCCEECCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC EDYEMDLIRWRFQFILKDVEAKLSQKKIDYLKKHGNNGYPQFEKSIQLEYALEKGKLEEM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEEEEEHHHHCCHHHH VRVITDSNEPTILEEGNSNFLEEISKMSYHTTDGNQLSLLLPKEFGFLSIRRGSLDFEER HHHHHCCCCCEEEECCCCHHHHHHHHCEEECCCCCEEEEEECCCCCEEEEECCCCCHHHH REIESHVEHTFQFLSKIPWTRELKMVPSIAHGHHEKLNGSGYPRGLSAVEIPVQAKMMAI HHHHHHHHHHHHHHHHCCCCHHHHHCCHHHCCCCCCCCCCCCCCCCCEEECCHHHHHHHH ADIFDALTDQDRPYKKAVPLDRAFDILKMEVRDQHIDGDLLDLFIESRAYEKIQHKR HHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: nucleoside 3',5'-cyclic phosphate; H2O
Specific reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA