Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
---|---|
Accession | NC_010602 |
Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is cysI
Identifier: 183220577
GI number: 183220577
Start: 1228461
End: 1230128
Strand: Direct
Name: cysI
Synonym: LEPBI_I1181
Alternate gene names: 183220577
Gene position: 1228461-1230128 (Clockwise)
Preceding gene: 183220576
Following gene: 183220585
Centisome position: 34.13
GC content: 39.87
Gene sequence:
>1668_bases ATGGCAGAAACTAAAAAAGAAACTCTCGCAGAAAAAGTAAAAAGACTAAGCCGGGGCCTTCGAGGATCACTCGTCGATAG TTTAAAGGATGAACATACTGGTTCTTTACGTTCTGATGACCAACTTTTACTTAAGTTTCATGGAATGTACCAACAAGATG ATCGGGATCGAAGAGATGAACGTGCTCTTAAAAAATTAGAACGTCTATATTCCTTTATGATTCGCTTGAGGATTCCTGGT GGAATGATTGGCCCTGTACACTGGGAAGCCTTACATAATGTAGCTGGTGAAAATTCCACTGGAACGATCAAAATCACCAC AAGACAAACCGTCCAACTCCATGGTATTTTAAAATCCAAAATCAAACCAACCATCAAAGCATTTGATTCTGTATTTTTGG ATTCCATCGCGGCTTGTGGAGATGTCAATCGTAATGTTACATGTACTTCGAATCCAGCGGCAAGCCCCCTCCACAAAGAG GTGTTTGGTTATGCAGGGGAAATCAGTCGTTCCTTACTTCCCAAAACGAGAGCGTATTACGAAATTTGGTTAGATGAAAA TCTTTTAGCAGAAAAAGAAGAACCAGAAGATCCTTTGTATAAGGATGTTTACCTTCCTCGTAAATTCAAAATCGCCATCG CGATCCCGCCGTATAACGATGTGGATCTTTTTACAAACGACATTGGTCTCATCGCCATCATAGAAAATGGACAATTATTG GGATTCAATGTAGCAGTGGGGGGAGGACTTGGAACAACTCATGGGAATCCCGATACTTATCCTAGGGTTGGAACTGTATT TGGTTTTATTCCTAAAAAAGACATATTACGTGTTGTTTACGAGATTGTCACTGTCCAAAGAGATTTTGGAAACAGAGAAG ACCGCAAATTGTCTCGATTGAAATACACATTGGACCGGTTAGGTGTTGAGTTTTACAAACGTGAAGTTGAAAAACGTGCA GGTATTAGTTTTGAGTCAGCAAAAGATTTTCAATTCACAACAAGGTCTGATGATTTTGGATGGAAACAAGATGCGGCAGG AAACTGGCATTATACCGTATTTGTTGAAAATGGAAGGGTCTGTGACGAACATGGGTATAATCTAAAAACAGCTCTTCTTG AAGTTTCCAAAACAAGACGTGCAACATTTCGTTTCACTTGTAACCAAAACTTGATTTTGTCCGATATCTTTCCAAAGGAC AAGGATCTCATTGAATCGATTCTTGTAAAATTTGGAGTCCATCGAAAGACTGCTGAGGTATCTCCTATCCGTAAAAATTC CATTGCTTGTGTTGCGTTAAACACTTGTTCATTGGCGCTTGCGGAAGCACAAAGATACCTGCCAAGCCTCATTGATAAAA TCGAACCAATCCTTTCCAAACATGGGCTATCAGAGGAACCAATTTCCATTCGGATGACAGGTTGCCCCAATGGATGTGCA AGGCCTTATATCTCCGAAATTGGACTTGTGGGAACATCCTACGGTAAATACAATTTACACGTAGGTGCCGACGCAGAAGG ATACCGTCTCAATAAAAAGTACAAAGAAGATTTGGATGAGTCGGCAATCTTACAAGAATTAGATGGTCTATTTGGAAAAT TTTCAAAGGATCGAAAAGGTAAGGAATCCTTTGGAGATTATATCAATCGGATTGGGATTTTGAAATAA
Upstream 100 bases:
>100_bases TTATCGGAAAGAACTTTTGATACTGGAAAAGAAGCTTCTGATTATCTAAAAGAATTGGAAGAAAACGGCCGTTACATCAA GGACGTTTACTGAGGAACCC
Downstream 100 bases:
>100_bases GAATCGAAACCAAACGAAACCAATGGTTCAAGGATATTGGATCATTGGATGTATTTTTTTCATAAAATTTCCCACCATAA AACAGCGTATACCTATCCAA
Product: sulfite reductase hemoprotein subunit beta
Products: NA
Alternate protein names: SiR-HP; SiRHP
Number of amino acids: Translated: 555; Mature: 554
Protein sequence:
>555_residues MAETKKETLAEKVKRLSRGLRGSLVDSLKDEHTGSLRSDDQLLLKFHGMYQQDDRDRRDERALKKLERLYSFMIRLRIPG GMIGPVHWEALHNVAGENSTGTIKITTRQTVQLHGILKSKIKPTIKAFDSVFLDSIAACGDVNRNVTCTSNPAASPLHKE VFGYAGEISRSLLPKTRAYYEIWLDENLLAEKEEPEDPLYKDVYLPRKFKIAIAIPPYNDVDLFTNDIGLIAIIENGQLL GFNVAVGGGLGTTHGNPDTYPRVGTVFGFIPKKDILRVVYEIVTVQRDFGNREDRKLSRLKYTLDRLGVEFYKREVEKRA GISFESAKDFQFTTRSDDFGWKQDAAGNWHYTVFVENGRVCDEHGYNLKTALLEVSKTRRATFRFTCNQNLILSDIFPKD KDLIESILVKFGVHRKTAEVSPIRKNSIACVALNTCSLALAEAQRYLPSLIDKIEPILSKHGLSEEPISIRMTGCPNGCA RPYISEIGLVGTSYGKYNLHVGADAEGYRLNKKYKEDLDESAILQELDGLFGKFSKDRKGKESFGDYINRIGILK
Sequences:
>Translated_555_residues MAETKKETLAEKVKRLSRGLRGSLVDSLKDEHTGSLRSDDQLLLKFHGMYQQDDRDRRDERALKKLERLYSFMIRLRIPG GMIGPVHWEALHNVAGENSTGTIKITTRQTVQLHGILKSKIKPTIKAFDSVFLDSIAACGDVNRNVTCTSNPAASPLHKE VFGYAGEISRSLLPKTRAYYEIWLDENLLAEKEEPEDPLYKDVYLPRKFKIAIAIPPYNDVDLFTNDIGLIAIIENGQLL GFNVAVGGGLGTTHGNPDTYPRVGTVFGFIPKKDILRVVYEIVTVQRDFGNREDRKLSRLKYTLDRLGVEFYKREVEKRA GISFESAKDFQFTTRSDDFGWKQDAAGNWHYTVFVENGRVCDEHGYNLKTALLEVSKTRRATFRFTCNQNLILSDIFPKD KDLIESILVKFGVHRKTAEVSPIRKNSIACVALNTCSLALAEAQRYLPSLIDKIEPILSKHGLSEEPISIRMTGCPNGCA RPYISEIGLVGTSYGKYNLHVGADAEGYRLNKKYKEDLDESAILQELDGLFGKFSKDRKGKESFGDYINRIGILK >Mature_554_residues AETKKETLAEKVKRLSRGLRGSLVDSLKDEHTGSLRSDDQLLLKFHGMYQQDDRDRRDERALKKLERLYSFMIRLRIPGG MIGPVHWEALHNVAGENSTGTIKITTRQTVQLHGILKSKIKPTIKAFDSVFLDSIAACGDVNRNVTCTSNPAASPLHKEV FGYAGEISRSLLPKTRAYYEIWLDENLLAEKEEPEDPLYKDVYLPRKFKIAIAIPPYNDVDLFTNDIGLIAIIENGQLLG FNVAVGGGLGTTHGNPDTYPRVGTVFGFIPKKDILRVVYEIVTVQRDFGNREDRKLSRLKYTLDRLGVEFYKREVEKRAG ISFESAKDFQFTTRSDDFGWKQDAAGNWHYTVFVENGRVCDEHGYNLKTALLEVSKTRRATFRFTCNQNLILSDIFPKDK DLIESILVKFGVHRKTAEVSPIRKNSIACVALNTCSLALAEAQRYLPSLIDKIEPILSKHGLSEEPISIRMTGCPNGCAR PYISEIGLVGTSYGKYNLHVGADAEGYRLNKKYKEDLDESAILQELDGLFGKFSKDRKGKESFGDYINRIGILK
Specific function: Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate
COG id: COG0155
COG function: function code P; Sulfite reductase, beta subunit (hemoprotein)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Homologues:
Organism=Escherichia coli, GI1789122, Length=551, Percent_Identity=49.3647912885662, Blast_Score=566, Evalue=1e-163, Organism=Saccharomyces cerevisiae, GI6322597, Length=583, Percent_Identity=41.6809605488851, Blast_Score=471, Evalue=1e-133,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): CYSI_LEPBA (B0SF75)
Other databases:
- EMBL: CP000777 - RefSeq: YP_001962240.1 - ProteinModelPortal: B0SF75 - SMR: B0SF75 - GeneID: 6387410 - GenomeReviews: CP000777_GR - KEGG: lbf:LBF_1138 - HOGENOM: HBG626671 - OMA: TRQAFQM - ProtClustDB: CLSK2336526 - BioCyc: LBIF355278:LBF_1138-MONOMER - HAMAP: MF_01540 - InterPro: IPR011786 - InterPro: IPR005117 - InterPro: IPR006067 - InterPro: IPR006066 - PRINTS: PR00397
Pfam domain/function: PF01077 NIR_SIR; PF03460 NIR_SIR_ferr; SSF55124 NiR_SiRalpha_1/3
EC number: =1.8.1.2
Molecular weight: Translated: 62617; Mature: 62486
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: PS00365 NIR_SIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAETKKETLAEKVKRLSRGLRGSLVDSLKDEHTGSLRSDDQLLLKFHGMYQQDDRDRRDE CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHH RALKKLERLYSFMIRLRIPGGMIGPVHWEALHNVAGENSTGTIKITTRQTVQLHGILKSK HHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCEEHHHHHHHHH IKPTIKAFDSVFLDSIAACGDVNRNVTCTSNPAASPLHKEVFGYAGEISRSLLPKTRAYY HHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEE EIWLDENLLAEKEEPEDPLYKDVYLPRKFKIAIAIPPYNDVDLFTNDIGLIAIIENGQLL EEEECCCHHCCCCCCCCCCHHHCCCCCEEEEEEEECCCCCCCEEECCCEEEEEEECCEEE GFNVAVGGGLGTTHGNPDTYPRVGTVFGFIPKKDILRVVYEIVTVQRDFGNREDRKLSRL EEEEEECCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH KYTLDRLGVEFYKREVEKRAGISFESAKDFQFTTRSDDFGWKQDAAGNWHYTVFVENGRV HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEEECCEE CDEHGYNLKTALLEVSKTRRATFRFTCNQNLILSDIFPKDKDLIESILVKFGVHRKTAEV ECCCCCCHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCC SPIRKNSIACVALNTCSLALAEAQRYLPSLIDKIEPILSKHGLSEEPISIRMTGCPNGCA CCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC RPYISEIGLVGTSYGKYNLHVGADAEGYRLNKKYKEDLDESAILQELDGLFGKFSKDRKG CHHHHHHCCEECCCCEEEEEECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCC KESFGDYINRIGILK HHHHHHHHHHCCCCC >Mature Secondary Structure AETKKETLAEKVKRLSRGLRGSLVDSLKDEHTGSLRSDDQLLLKFHGMYQQDDRDRRDE CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHH RALKKLERLYSFMIRLRIPGGMIGPVHWEALHNVAGENSTGTIKITTRQTVQLHGILKSK HHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCEEHHHHHHHHH IKPTIKAFDSVFLDSIAACGDVNRNVTCTSNPAASPLHKEVFGYAGEISRSLLPKTRAYY HHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEE EIWLDENLLAEKEEPEDPLYKDVYLPRKFKIAIAIPPYNDVDLFTNDIGLIAIIENGQLL EEEECCCHHCCCCCCCCCCHHHCCCCCEEEEEEEECCCCCCCEEECCCEEEEEEECCEEE GFNVAVGGGLGTTHGNPDTYPRVGTVFGFIPKKDILRVVYEIVTVQRDFGNREDRKLSRL EEEEEECCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH KYTLDRLGVEFYKREVEKRAGISFESAKDFQFTTRSDDFGWKQDAAGNWHYTVFVENGRV HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEEECCEE CDEHGYNLKTALLEVSKTRRATFRFTCNQNLILSDIFPKDKDLIESILVKFGVHRKTAEV ECCCCCCHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCC SPIRKNSIACVALNTCSLALAEAQRYLPSLIDKIEPILSKHGLSEEPISIRMTGCPNGCA CCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC RPYISEIGLVGTSYGKYNLHVGADAEGYRLNKKYKEDLDESAILQELDGLFGKFSKDRKG CHHHHHHCCEECCCCEEEEEECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCC KESFGDYINRIGILK HHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA