Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220492
Identifier: 183220492
GI number: 183220492
Start: 1140379
End: 1141341
Strand: Direct
Name: 183220492
Synonym: LEPBI_I1091
Alternate gene names: NA
Gene position: 1140379-1141341 (Clockwise)
Preceding gene: 183220488
Following gene: 183220493
Centisome position: 31.68
GC content: 35.93
Gene sequence:
>963_bases GTGAGTATTTTTATGGCAGTTTCAATTTTTTCATTTATTTTTGTCCTCTTTGTTTCCTTCATTCCCATTGCATGCCAAGT CAGTTCCCATGACCATAAAACATTACCAATCGAATCGTCCTTAGAACCAATCGCTCGTCCTATCAAAACCCAAATAATGG TAGAGTTTCAGGTGATCAAAGCTGCCGATTGGGAAGTGCCACTTGCGGGATTACTCAATTTAAACGACCCAAATGCAAAA CTCGCCAATTTAACTGACAGACCGGAACCCATCTCCATCTACTTTTATTTGATCAAACATCCGAAGTTTGGGGCCTTTCT GATAGATTCAGGTATCGGGGAAAGTTTTACAAAAGGAAAAGACCATCTCCTTGTCAGTTCGATTGTTGCATCGCAAATGA ATTTTGATAAATTAAAAATATATGAAACAACAAAGAATTTTTTGACCAAAAATAAGATTTCTTTAAAAGGAATTTTTTAT ACACATTTACATTTAGATCATGTGATGGGGGCGTATGAAGTAGAAAGGTCGGTTCCTTTTTATGTTGGTCCCAATGAAGT ATCCAATAAACAATTTATTAATTTATTTGTGCAAGGTTCAACGAATCGTCTTTTGGGTGAGAATCCAAATTTAATCCAAC TTGATTTTGGTAAAAATCAATATCAAGTTTCTGTTTTAGATTTTTTTGGTGATCAAAGTTTTTTTGTCATTTCTGTTCCA GGCCATACTCCTGGTAGCTTAGCATTTTTGATCCCTTCAAAAGAAGGAGGTCATTTGTTACTTGGTGATACATGCCACAC ACGTTTTGGTTGGTTACAAAATGTGATCCCAGGCTCATTCACTGCAGACTCAGAATCAAATCGCAAAAGTTTGGATGGAT TAAAATTCATCGCAAGTTCCTACAAACCTAAGTACATTTACCCAGGGCATCAAGAACGAATCGTTTCGATAGATCTAAAA TAA
Upstream 100 bases:
>100_bases GCAAGTCTTTGTAGGAATTTATGATCTAAAATAGAGAAATGGGATTTTTTTTTAGAGACAGTTTTTTACCAATGAGTTGG AATCGAGTTTCCTGAGGTAG
Downstream 100 bases:
>100_bases TCTATTGATTCTTTTAAAAAACCTAAGATGTTAATTCCTGGTTTTAATTGAGGTCAGCCTATGTTTTTGATCAGATTCTT TGTATTATTTGTTTTCTTAC
Product: putative metallo-hydrolase
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Zn-Dependent Hydrolase Lipoprotein; Metallo-Hydrolase; Zn-Dependent Hydrolases Including Glyoxylases; Beta-Lactamase Domain-Containing Protein
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MSIFMAVSIFSFIFVLFVSFIPIACQVSSHDHKTLPIESSLEPIARPIKTQIMVEFQVIKAADWEVPLAGLLNLNDPNAK LANLTDRPEPISIYFYLIKHPKFGAFLIDSGIGESFTKGKDHLLVSSIVASQMNFDKLKIYETTKNFLTKNKISLKGIFY THLHLDHVMGAYEVERSVPFYVGPNEVSNKQFINLFVQGSTNRLLGENPNLIQLDFGKNQYQVSVLDFFGDQSFFVISVP GHTPGSLAFLIPSKEGGHLLLGDTCHTRFGWLQNVIPGSFTADSESNRKSLDGLKFIASSYKPKYIYPGHQERIVSIDLK
Sequences:
>Translated_320_residues MSIFMAVSIFSFIFVLFVSFIPIACQVSSHDHKTLPIESSLEPIARPIKTQIMVEFQVIKAADWEVPLAGLLNLNDPNAK LANLTDRPEPISIYFYLIKHPKFGAFLIDSGIGESFTKGKDHLLVSSIVASQMNFDKLKIYETTKNFLTKNKISLKGIFY THLHLDHVMGAYEVERSVPFYVGPNEVSNKQFINLFVQGSTNRLLGENPNLIQLDFGKNQYQVSVLDFFGDQSFFVISVP GHTPGSLAFLIPSKEGGHLLLGDTCHTRFGWLQNVIPGSFTADSESNRKSLDGLKFIASSYKPKYIYPGHQERIVSIDLK >Mature_319_residues SIFMAVSIFSFIFVLFVSFIPIACQVSSHDHKTLPIESSLEPIARPIKTQIMVEFQVIKAADWEVPLAGLLNLNDPNAKL ANLTDRPEPISIYFYLIKHPKFGAFLIDSGIGESFTKGKDHLLVSSIVASQMNFDKLKIYETTKNFLTKNKISLKGIFYT HLHLDHVMGAYEVERSVPFYVGPNEVSNKQFINLFVQGSTNRLLGENPNLIQLDFGKNQYQVSVLDFFGDQSFFVISVPG HTPGSLAFLIPSKEGGHLLLGDTCHTRFGWLQNVIPGSFTADSESNRKSLDGLKFIASSYKPKYIYPGHQERIVSIDLK
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35883; Mature: 35752
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIFMAVSIFSFIFVLFVSFIPIACQVSSHDHKTLPIESSLEPIARPIKTQIMVEFQVIK CEEEHHHHHHHHHHHHHHHHCCEEEEECCCCCEECCCCCCHHHHHHHHCEEEEEEEEEEE AADWEVPLAGLLNLNDPNAKLANLTDRPEPISIYFYLIKHPKFGAFLIDSGIGESFTKGK ECCCCCCEEEEEECCCCCCEEECCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCC DHLLVSSIVASQMNFDKLKIYETTKNFLTKNKISLKGIFYTHLHLDHVMGAYEVERSVPF CHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCEEEEEEEEEEEEHHHHHCHHHHHCCCCE YVGPNEVSNKQFINLFVQGSTNRLLGENPNLIQLDFGKNQYQVSVLDFFGDQSFFVISVP EECCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEEEEECCCCCEEEEECC GHTPGSLAFLIPSKEGGHLLLGDTCHTRFGWLQNVIPGSFTADSESNRKSLDGLKFIASS CCCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHC YKPKYIYPGHQERIVSIDLK CCCCEECCCCCCEEEEEECC >Mature Secondary Structure SIFMAVSIFSFIFVLFVSFIPIACQVSSHDHKTLPIESSLEPIARPIKTQIMVEFQVIK EEEHHHHHHHHHHHHHHHHCCEEEEECCCCCEECCCCCCHHHHHHHHCEEEEEEEEEEE AADWEVPLAGLLNLNDPNAKLANLTDRPEPISIYFYLIKHPKFGAFLIDSGIGESFTKGK ECCCCCCEEEEEECCCCCCEEECCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCC DHLLVSSIVASQMNFDKLKIYETTKNFLTKNKISLKGIFYTHLHLDHVMGAYEVERSVPF CHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCEEEEEEEEEEEEHHHHHCHHHHHCCCCE YVGPNEVSNKQFINLFVQGSTNRLLGENPNLIQLDFGKNQYQVSVLDFFGDQSFFVISVP EECCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEEEEECCCCCEEEEECC GHTPGSLAFLIPSKEGGHLLLGDTCHTRFGWLQNVIPGSFTADSESNRKSLDGLKFIASS CCCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHC YKPKYIYPGHQERIVSIDLK CCCCEECCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA