Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220493
Identifier: 183220493
GI number: 183220493
Start: 1141402
End: 1142991
Strand: Direct
Name: 183220493
Synonym: LEPBI_I1092
Alternate gene names: NA
Gene position: 1141402-1142991 (Clockwise)
Preceding gene: 183220492
Following gene: 183220494
Centisome position: 31.71
GC content: 37.36
Gene sequence:
>1590_bases ATGTTTTTGATCAGATTCTTTGTATTATTTGTTTTCTTACCTTTTATTACTTTGGAAGCTGTGGACCAAACCAATTGGAA AAAAGCAGACAATTTATTAAAAAAACAAGATTACCAATCTGCGTTTCAGCTTTCCGAAGCAATCATCAAATCCGATCCAA AGGATAGTTTTGGGTGGTGGCTTAGGCTCAGTTCATCATCCCAATTAGCAACTAAGAAGGGGAAGTGGCCGGAGGAATGT TTTCAGAGTGCCAAAGAACATGCCCAATTAGTCCCAGAAGAGGAGTCTTCGAGTTTTACCACGGCAATCTGGTGTTTGAA TCATGACGCAAGGTATATGGAGATGGTATCTCTCATTCCCAAAGTTCTTCCAAAATCTCGCGAAAAAATTGGGAATGGAA ATTATGGATTATTAATCAATACATTAACAATCGCCTATATCAAGTTAAATGATCGAAAGAACGCGAGAGACATCCTATTT GCTGGACTTACTCAATTATCTGGAACACCCGAAGCGATGAATACTGGTTATAATGTGGGTGAACTATTTTATGATACCGA TATCTCGCTTAGTGAAAGAGAAAGGTGGCATGAATTGTTTCAGAAGAATTTATTTAAAGAAAAAATTTCGAATCCACTCA TTCCCTCCATATCATGGAATACTTCGTTACTAGCAGATGAATATGTAAAGCAAGGGAAATATAATTTTGCTTTTGACACC ATTTCTATGTTATATCCTGACATGGATACTCATGTGTCATCCTATTGGAATTTTTTAAGAGACCAACTCCTCATCAAATA CAAAGCACTTAAGTTCCGAACCAAAAAACTAAAAGAAGAACCTCGCCGTAAATTGAAAATGGTTTTTATTGTGATCCCAA GGACTCGTCTTTTGGATCCACTCCCTTCAAAATTAAAACCATACCAAAACATTGATGAAGATGTATCAGAAAAAGCTGTT TCCGATTTATTACTCAGTTTTATTTATTTTAGAGATTCATTTGAAGAAGTATCGAATGGAATCCATTGGGATTACGAAGT GATTCGGACCGATTCCGAAATCAAAACTACCAATTTCAGTGATGAATCCTTTCGTTATGTGATGCAACCTTCCATTGAAT CCATCCAACCACCCCTTTCAGAAGATGTCCTTCACCAGATCAAAGCCAGTGATGGTGTGATTGTGGTCTGGCCTGGCACA AAACAACCAGAAGGTGTTCTCATCACAAATGGAGGTGGGACAGAGTGGAATTATGGAACAGTGTCTGATCCTGAAATACG ATTGACCATCCTTTCTGATTCCAATAAAAATATCTCTTCAGGAAACCATGCCAACCATCCCATTTTTATTTACCATGAAT TGTTTCATGTATTAGAATGGGCCTACCACAAATCCAATTTCCCTAAAAAAGACCATCCATATATGAGAAAAAAGGAATGG CCAAAAGATTACCAAGGGATCACGGAATGGGATTTTTATTCGGAAACGTTTCAGAAACGGATGATGACAGAAGACAAGAT GGAGCGTTTGTATTGGTTCGGTAGAAAAGAAGGTTTTTACGGAATCAAAGTAAAGGAAGAAAAAAAGTGA
Upstream 100 bases:
>100_bases AGGGCATCAAGAACGAATCGTTTCGATAGATCTAAAATAATCTATTGATTCTTTTAAAAAACCTAAGATGTTAATTCCTG GTTTTAATTGAGGTCAGCCT
Downstream 100 bases:
>100_bases AGTTTCCGAGATAAAAATCAGGATTTTGGTAGGAATAGGCAAAAGAAAAATAAAAAACAATTGGATATTGAACTTTCGGG AATTGATTTTCCATCGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 529; Mature: 529
Protein sequence:
>529_residues MFLIRFFVLFVFLPFITLEAVDQTNWKKADNLLKKQDYQSAFQLSEAIIKSDPKDSFGWWLRLSSSSQLATKKGKWPEEC FQSAKEHAQLVPEEESSSFTTAIWCLNHDARYMEMVSLIPKVLPKSREKIGNGNYGLLINTLTIAYIKLNDRKNARDILF AGLTQLSGTPEAMNTGYNVGELFYDTDISLSERERWHELFQKNLFKEKISNPLIPSISWNTSLLADEYVKQGKYNFAFDT ISMLYPDMDTHVSSYWNFLRDQLLIKYKALKFRTKKLKEEPRRKLKMVFIVIPRTRLLDPLPSKLKPYQNIDEDVSEKAV SDLLLSFIYFRDSFEEVSNGIHWDYEVIRTDSEIKTTNFSDESFRYVMQPSIESIQPPLSEDVLHQIKASDGVIVVWPGT KQPEGVLITNGGGTEWNYGTVSDPEIRLTILSDSNKNISSGNHANHPIFIYHELFHVLEWAYHKSNFPKKDHPYMRKKEW PKDYQGITEWDFYSETFQKRMMTEDKMERLYWFGRKEGFYGIKVKEEKK
Sequences:
>Translated_529_residues MFLIRFFVLFVFLPFITLEAVDQTNWKKADNLLKKQDYQSAFQLSEAIIKSDPKDSFGWWLRLSSSSQLATKKGKWPEEC FQSAKEHAQLVPEEESSSFTTAIWCLNHDARYMEMVSLIPKVLPKSREKIGNGNYGLLINTLTIAYIKLNDRKNARDILF AGLTQLSGTPEAMNTGYNVGELFYDTDISLSERERWHELFQKNLFKEKISNPLIPSISWNTSLLADEYVKQGKYNFAFDT ISMLYPDMDTHVSSYWNFLRDQLLIKYKALKFRTKKLKEEPRRKLKMVFIVIPRTRLLDPLPSKLKPYQNIDEDVSEKAV SDLLLSFIYFRDSFEEVSNGIHWDYEVIRTDSEIKTTNFSDESFRYVMQPSIESIQPPLSEDVLHQIKASDGVIVVWPGT KQPEGVLITNGGGTEWNYGTVSDPEIRLTILSDSNKNISSGNHANHPIFIYHELFHVLEWAYHKSNFPKKDHPYMRKKEW PKDYQGITEWDFYSETFQKRMMTEDKMERLYWFGRKEGFYGIKVKEEKK >Mature_529_residues MFLIRFFVLFVFLPFITLEAVDQTNWKKADNLLKKQDYQSAFQLSEAIIKSDPKDSFGWWLRLSSSSQLATKKGKWPEEC FQSAKEHAQLVPEEESSSFTTAIWCLNHDARYMEMVSLIPKVLPKSREKIGNGNYGLLINTLTIAYIKLNDRKNARDILF AGLTQLSGTPEAMNTGYNVGELFYDTDISLSERERWHELFQKNLFKEKISNPLIPSISWNTSLLADEYVKQGKYNFAFDT ISMLYPDMDTHVSSYWNFLRDQLLIKYKALKFRTKKLKEEPRRKLKMVFIVIPRTRLLDPLPSKLKPYQNIDEDVSEKAV SDLLLSFIYFRDSFEEVSNGIHWDYEVIRTDSEIKTTNFSDESFRYVMQPSIESIQPPLSEDVLHQIKASDGVIVVWPGT KQPEGVLITNGGGTEWNYGTVSDPEIRLTILSDSNKNISSGNHANHPIFIYHELFHVLEWAYHKSNFPKKDHPYMRKKEW PKDYQGITEWDFYSETFQKRMMTEDKMERLYWFGRKEGFYGIKVKEEKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61996; Mature: 61996
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLIRFFVLFVFLPFITLEAVDQTNWKKADNLLKKQDYQSAFQLSEAIIKSDPKDSFGWW CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE LRLSSSSQLATKKGKWPEECFQSAKEHAQLVPEEESSSFTTAIWCLNHDARYMEMVSLIP EEECCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCHHHHHHHHHHH KVLPKSREKIGNGNYGLLINTLTIAYIKLNDRKNARDILFAGLTQLSGTPEAMNTGYNVG HHCCHHHHHCCCCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHCCCCHH ELFYDTDISLSERERWHELFQKNLFKEKISNPLIPSISWNTSLLADEYVKQGKYNFAFDT HEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHH ISMLYPDMDTHVSSYWNFLRDQLLIKYKALKFRTKKLKEEPRRKLKMVFIVIPRTRLLDP HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCHHHCCC LPSKLKPYQNIDEDVSEKAVSDLLLSFIYFRDSFEEVSNGIHWDYEVIRTDSEIKTTNFS CCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEECCCC DESFRYVMQPSIESIQPPLSEDVLHQIKASDGVIVVWPGTKQPEGVLITNGGGTEWNYGT CHHHHEEECCCHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEEECCCCCCCCCCC VSDPEIRLTILSDSNKNISSGNHANHPIFIYHELFHVLEWAYHKSNFPKKDHPYMRKKEW CCCCCEEEEEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PKDYQGITEWDFYSETFQKRMMTEDKMERLYWFGRKEGFYGIKVKEEKK CHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC >Mature Secondary Structure MFLIRFFVLFVFLPFITLEAVDQTNWKKADNLLKKQDYQSAFQLSEAIIKSDPKDSFGWW CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE LRLSSSSQLATKKGKWPEECFQSAKEHAQLVPEEESSSFTTAIWCLNHDARYMEMVSLIP EEECCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCHHHHHHHHHHH KVLPKSREKIGNGNYGLLINTLTIAYIKLNDRKNARDILFAGLTQLSGTPEAMNTGYNVG HHCCHHHHHCCCCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHCCCCHH ELFYDTDISLSERERWHELFQKNLFKEKISNPLIPSISWNTSLLADEYVKQGKYNFAFDT HEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHH ISMLYPDMDTHVSSYWNFLRDQLLIKYKALKFRTKKLKEEPRRKLKMVFIVIPRTRLLDP HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCHHHCCC LPSKLKPYQNIDEDVSEKAVSDLLLSFIYFRDSFEEVSNGIHWDYEVIRTDSEIKTTNFS CCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEECCCC DESFRYVMQPSIESIQPPLSEDVLHQIKASDGVIVVWPGTKQPEGVLITNGGGTEWNYGT CHHHHEEECCCHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEEECCCCCCCCCCC VSDPEIRLTILSDSNKNISSGNHANHPIFIYHELFHVLEWAYHKSNFPKKDHPYMRKKEW CCCCCEEEEEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PKDYQGITEWDFYSETFQKRMMTEDKMERLYWFGRKEGFYGIKVKEEKK CHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA