Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220413
Identifier: 183220413
GI number: 183220413
Start: 1054463
End: 1055416
Strand: Direct
Name: 183220413
Synonym: LEPBI_I1009
Alternate gene names: NA
Gene position: 1054463-1055416 (Clockwise)
Preceding gene: 183220409
Following gene: 183220414
Centisome position: 29.29
GC content: 41.4
Gene sequence:
>954_bases GTGATTGTGCAACTCTACGGAGTCCGCGGTTCCATTGCGAGCCCCCTCCGAAACCAAGACTACCGCAAAAAGATAATCGA GATTCTAGACCTCTACAAACAATCTGGGGCTGAAGGGTCAGCGGATGAATTTTGGCAAAATCTCCCGTACCATTTGAAAT TTGTCACAGGATCTGACACAACCTGTGTTTCTGTCACAGATGATGATGGGGAAACCTATGTTTTGGACATGGGGACAGGT CTTCGTAATTTAGGGGATGAACTTGTTTCCGAATACTTCACGAACCAATTGAAAAAAACCATTTCGTTTTTCATCACTCA TACCCATTGGGACCACATCCAAGGCCTACCTTTTTTTAAACCCATTTATTTTCCAGACTTCCATTTGCATTTTTATTCTC CCTATTCTGATTTAGAAAAACGATTACATACCCAACAAGAACCAGAATTTTTCCCCGTTCCTCTGGATGGAACGGGTTCC GCAAAAGAGTTCAAATTGTTTTTCCCAGGGGATGTTTTGGAATTTCCTTCGGGACTCAAAGTGGAATGTTACCCTCTCAA ACACCCAGGTGGATCCTTTGCGTATAAATTCACAAACCGAGCCGGGAAAATTTTTATTTTTGCAACCGATGCCGAATTTA CGGGAGCAGATATGGATCTCATCCACGACTGTATGCCTTTTTTTGCTGACGCCGATTTACTCATACTCGACACCCAATAT ACGCTCGATGAATCTTTTTCTAAATTTGATTGGGGGCATACAGCATATACCATGTCTGTGAATTGTGCCTCAGCTTGGCG TGTGAAAAACTTGGTGCTTACTCATCACGAACCAAGTTACTCTGACGAAAAAATTTATGAAATATATGAAAGTGCCAAAT TGCACAAACAGCAATTAGGCGAAAAGAAATTAAAAATTCATTTAGCAAGAGAAGGACTAAGGTTCCACCTATAA
Upstream 100 bases:
>100_bases AGGTCCAAATCGAAGTTCATATCCTGGGGTACGAGAGGCCATAAATTCAAGGTCGTAAATCTTGAGTGACAAGGAAAGTC GATTTCCTAGCATCGAGGAA
Downstream 100 bases:
>100_bases TGACTATGAACAAAGAAAAAACACTACGTATCACCATCACAACATTCTTTAGTATTGCCTTATTTGGTGGACTTTTTTTT GGATACATCCTTTCCGAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metal-Dependent Hydrolase; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase Superfamily Hydrolase; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Protein; Metal Dependant Beta Lactamase Protein; Metallo-Beta-Lactamase Superfamily; Phytochrome Sensor Protein; Metal-Dependent Hydrolase Of Beta-Lactamase Superfamily I; GAF Domain/HD Domain Protein; Beta-Lactamase Family Hydrolase; Conserved Beta-Lactamase Domain Protein
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MIVQLYGVRGSIASPLRNQDYRKKIIEILDLYKQSGAEGSADEFWQNLPYHLKFVTGSDTTCVSVTDDDGETYVLDMGTG LRNLGDELVSEYFTNQLKKTISFFITHTHWDHIQGLPFFKPIYFPDFHLHFYSPYSDLEKRLHTQQEPEFFPVPLDGTGS AKEFKLFFPGDVLEFPSGLKVECYPLKHPGGSFAYKFTNRAGKIFIFATDAEFTGADMDLIHDCMPFFADADLLILDTQY TLDESFSKFDWGHTAYTMSVNCASAWRVKNLVLTHHEPSYSDEKIYEIYESAKLHKQQLGEKKLKIHLAREGLRFHL
Sequences:
>Translated_317_residues MIVQLYGVRGSIASPLRNQDYRKKIIEILDLYKQSGAEGSADEFWQNLPYHLKFVTGSDTTCVSVTDDDGETYVLDMGTG LRNLGDELVSEYFTNQLKKTISFFITHTHWDHIQGLPFFKPIYFPDFHLHFYSPYSDLEKRLHTQQEPEFFPVPLDGTGS AKEFKLFFPGDVLEFPSGLKVECYPLKHPGGSFAYKFTNRAGKIFIFATDAEFTGADMDLIHDCMPFFADADLLILDTQY TLDESFSKFDWGHTAYTMSVNCASAWRVKNLVLTHHEPSYSDEKIYEIYESAKLHKQQLGEKKLKIHLAREGLRFHL >Mature_317_residues MIVQLYGVRGSIASPLRNQDYRKKIIEILDLYKQSGAEGSADEFWQNLPYHLKFVTGSDTTCVSVTDDDGETYVLDMGTG LRNLGDELVSEYFTNQLKKTISFFITHTHWDHIQGLPFFKPIYFPDFHLHFYSPYSDLEKRLHTQQEPEFFPVPLDGTGS AKEFKLFFPGDVLEFPSGLKVECYPLKHPGGSFAYKFTNRAGKIFIFATDAEFTGADMDLIHDCMPFFADADLLILDTQY TLDESFSKFDWGHTAYTMSVNCASAWRVKNLVLTHHEPSYSDEKIYEIYESAKLHKQQLGEKKLKIHLAREGLRFHL
Specific function: Unknown
COG id: COG1235
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36494; Mature: 36494
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVQLYGVRGSIASPLRNQDYRKKIIEILDLYKQSGAEGSADEFWQNLPYHLKFVTGSDT CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEEEECCCC TCVSVTDDDGETYVLDMGTGLRNLGDELVSEYFTNQLKKTISFFITHTHWDHIQGLPFFK EEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHCCCCCCC PIYFPDFHLHFYSPYSDLEKRLHTQQEPEFFPVPLDGTGSAKEFKLFFPGDVLEFPSGLK CCCCCCEEEEEECCHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEECCCHHHCCCCCE VECYPLKHPGGSFAYKFTNRAGKIFIFATDAEFTGADMDLIHDCMPFFADADLLILDTQY EEEEEECCCCCCEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCC TLDESFSKFDWGHTAYTMSVNCASAWRVKNLVLTHHEPSYSDEKIYEIYESAKLHKQQLG CHHHCHHHCCCCCEEEEEEEECCCHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCC EKKLKIHLAREGLRFHL CHHEEEEEECCCCEECC >Mature Secondary Structure MIVQLYGVRGSIASPLRNQDYRKKIIEILDLYKQSGAEGSADEFWQNLPYHLKFVTGSDT CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEEEECCCC TCVSVTDDDGETYVLDMGTGLRNLGDELVSEYFTNQLKKTISFFITHTHWDHIQGLPFFK EEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHCCCCCCC PIYFPDFHLHFYSPYSDLEKRLHTQQEPEFFPVPLDGTGSAKEFKLFFPGDVLEFPSGLK CCCCCCEEEEEECCHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEECCCHHHCCCCCE VECYPLKHPGGSFAYKFTNRAGKIFIFATDAEFTGADMDLIHDCMPFFADADLLILDTQY EEEEEECCCCCCEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCC TLDESFSKFDWGHTAYTMSVNCASAWRVKNLVLTHHEPSYSDEKIYEIYESAKLHKQQLG CHHHCHHHCCCCCEEEEEEEECCCHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCC EKKLKIHLAREGLRFHL CHHEEEEEECCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA