Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220393
Identifier: 183220393
GI number: 183220393
Start: 1025441
End: 1025959
Strand: Direct
Name: 183220393
Synonym: LEPBI_I0989
Alternate gene names: NA
Gene position: 1025441-1025959 (Clockwise)
Preceding gene: 183220392
Following gene: 183220394
Centisome position: 28.49
GC content: 38.54
Gene sequence:
>519_bases ATGAAATTTAACCTCCTTCTTGTTTTCCTTTTTTTTGTTTCCTGCTCCCTCTTTCGCGAAACGGTGGGTTATCAAAAATA TCCAATCCCCGATGGGAAAAAGATTCTTTTGGTGCCCACGGTTTCCTCCTTTTATGCAGACCAATATCTATTGGAAAAAG AAATCATACATCAGATCACAGAAGAATTAGAACGTTTTGGATACTATGTCATTATAAGAGATGAAATCCATGAATTCAAA AAATATCCCGAATCCAATGACCATCTAGGCCGGCTACAATCCAATCTATCACCTAACGATGGTAAAAATGATTCGAGATT ATCCTACTGGTATGGGATCGCCGAAGGTTTGGATATCCCATACGTAGTATTTTTACGTTTCCCACAAACAACAAAAAGGG AAGGGATCATGGTGCGTTTGACTTGGACAGAGTTAAAACTTAGGCAATCAGAACGATTTGATTGGGATTGGATTCCAAAC TCTCCGCTTCCGTTTTTACAATCCAAGGAATCATTATGA
Upstream 100 bases:
>100_bases CTAATTTTTATCCGTATTATGAATTCCGACTTGATGCAGAGGTCCGTTCTGTCACTGGAAAACGTATGGCCTCTCCTTTT GTGATCCAAATGGAGGCTAA
Downstream 100 bases:
>100_bases TGAAAATAACCCAATCGGAATTATGGAATGTAATTTGTCTTTTTGGAATTTGTTTTGTTTTGAGTTGCCATAAAGCGGAA ATAGATGACCCAAAAGAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MKFNLLLVFLFFVSCSLFRETVGYQKYPIPDGKKILLVPTVSSFYADQYLLEKEIIHQITEELERFGYYVIIRDEIHEFK KYPESNDHLGRLQSNLSPNDGKNDSRLSYWYGIAEGLDIPYVVFLRFPQTTKREGIMVRLTWTELKLRQSERFDWDWIPN SPLPFLQSKESL
Sequences:
>Translated_172_residues MKFNLLLVFLFFVSCSLFRETVGYQKYPIPDGKKILLVPTVSSFYADQYLLEKEIIHQITEELERFGYYVIIRDEIHEFK KYPESNDHLGRLQSNLSPNDGKNDSRLSYWYGIAEGLDIPYVVFLRFPQTTKREGIMVRLTWTELKLRQSERFDWDWIPN SPLPFLQSKESL >Mature_172_residues MKFNLLLVFLFFVSCSLFRETVGYQKYPIPDGKKILLVPTVSSFYADQYLLEKEIIHQITEELERFGYYVIIRDEIHEFK KYPESNDHLGRLQSNLSPNDGKNDSRLSYWYGIAEGLDIPYVVFLRFPQTTKREGIMVRLTWTELKLRQSERFDWDWIPN SPLPFLQSKESL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20484; Mature: 20484
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFNLLLVFLFFVSCSLFRETVGYQKYPIPDGKKILLVPTVSSFYADQYLLEKEIIHQIT CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHH EELERFGYYVIIRDEIHEFKKYPESNDHLGRLQSNLSPNDGKNDSRLSYWYGIAEGLDIP HHHHHCCEEEEEHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEEHHCCCCCC YVVFLRFPQTTKREGIMVRLTWTELKLRQSERFDWDWIPNSPLPFLQSKESL EEEEEECCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKFNLLLVFLFFVSCSLFRETVGYQKYPIPDGKKILLVPTVSSFYADQYLLEKEIIHQIT CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHH EELERFGYYVIIRDEIHEFKKYPESNDHLGRLQSNLSPNDGKNDSRLSYWYGIAEGLDIP HHHHHCCEEEEEHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEEHHCCCCCC YVVFLRFPQTTKREGIMVRLTWTELKLRQSERFDWDWIPNSPLPFLQSKESL EEEEEECCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA