Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220392
Identifier: 183220392
GI number: 183220392
Start: 1024080
End: 1025444
Strand: Direct
Name: 183220392
Synonym: LEPBI_I0988
Alternate gene names: NA
Gene position: 1024080-1025444 (Clockwise)
Preceding gene: 183220391
Following gene: 183220393
Centisome position: 28.45
GC content: 41.68
Gene sequence:
>1365_bases ATGAAATCCGCACCATGGACAATTTGTATTGTTGGGATTTATTTTCTTTTGCATTGCCATTCTAAAATGGGAACGTCGCA AGATTGGTTGAGTTTATTTGTGAATGAAGACTCCCCCAAAGTGATTTCGTTTACTCCCAGTTCGGGGAGTGACCATGTCT CACCCAAAACAGAAATTTCCATTCTTTGGAGCCAACCCATGGAAATCCAATCTTGTGTTTCTGCGTTTTCATTGGAACCG AATACGAGAGGTAACTTTGAAACCACAGACCTTTCCTTAAAATTTTTTCCCAATGAAGAGTTATCTCCTATCGGATATAT GATCCGGTTGTCCAAACAATGTGAAAATAAAAAAGGAAAAGACTTAGACCGAGTTTATTCCATTCCCTTTTCTGTCAAAC TTGGTCCAACACTCCCGCCCCCATATATAGAATCCTTTTTGATCTCCATTGGGAACACCGAAGAATGTTTGTCAGGTGGA CAGATAGCGGATCGAATTTTGGGTGAAGTGGATTCGGCATGTTTAGGGAATCCTGAGCCTTCTCCGATGACAATACGTTT CTCAAAACCAATGGACCAAAGGGAAGTACAGTTAGGATTACGTTTAGAGCCATATGGATCTTTCCATTTAGAGTGGACGG ATCCAAACCAAGTCCAAATCCGATTCGATGAATTTTTAGAAAGCCAAACGCGTTACCAATTGATTCTATCTTCTGGAATT TCTGCCCTGGATGGTTCAAAAATACAAAACCCCGTTTCCTTAGATTTTTTTATAGGGGAAGGGCCAAGGCCACCAGAGGT GATTGGATTTGGATTAGCTTCCCAAAACTGTGGTTTAGGGATCCAAGAACTTGGATCTATGACAGGTGCTAGATGGGATT CTATTTCCTGCTTTTGGAGTAGAGGTCTTGCTATCTTAAGTCCACATGACTACAAATTTCGAGGTGGGGACAATGGTTCT GGTGAGAGTGGAAGTCCAAACGCTTGTGCAGATGTCTCAACCGATAATTTTAAACTCTTTTTTGACCAATATGTGGATCC AATTTCTGTGATTTCGTCGAGTCGATTGACAAAAATTTCACCACCAACAAGTAATATCCGTTTGGCGACATGGGAATGGG GGCACTGCCAAAACACTTTTCCGTATGGGTGCCGAGAGATCACGTATTCCTTTGCTGAAAGTGAAGCCAGTTGTAATGGT TCAGTTTTTGGGAACAATACCACTGGAGGCGATTTTAATTTAGCATCTTCTATACTCGCCCCTAATTTTTATCCGTATTA TGAATTCCGACTTGATGCAGAGGTCCGTTCTGTCACTGGAAAACGTATGGCCTCTCCTTTTGTGATCCAAATGGAGGCTA AATGA
Upstream 100 bases:
>100_bases GAACTCCTCTTCGATTGGAAAGAACTGACCCCAAAAGAAAATTTACAACCCAGAGGACCAAAGAAACAAAAATTAACCCC TTTCTTTTTGGAGGAATGAA
Downstream 100 bases:
>100_bases AATTTAACCTCCTTCTTGTTTTCCTTTTTTTTGTTTCCTGCTCCCTCTTTCGCGAAACGGTGGGTTATCAAAAATATCCA ATCCCCGATGGGAAAAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MKSAPWTICIVGIYFLLHCHSKMGTSQDWLSLFVNEDSPKVISFTPSSGSDHVSPKTEISILWSQPMEIQSCVSAFSLEP NTRGNFETTDLSLKFFPNEELSPIGYMIRLSKQCENKKGKDLDRVYSIPFSVKLGPTLPPPYIESFLISIGNTEECLSGG QIADRILGEVDSACLGNPEPSPMTIRFSKPMDQREVQLGLRLEPYGSFHLEWTDPNQVQIRFDEFLESQTRYQLILSSGI SALDGSKIQNPVSLDFFIGEGPRPPEVIGFGLASQNCGLGIQELGSMTGARWDSISCFWSRGLAILSPHDYKFRGGDNGS GESGSPNACADVSTDNFKLFFDQYVDPISVISSSRLTKISPPTSNIRLATWEWGHCQNTFPYGCREITYSFAESEASCNG SVFGNNTTGGDFNLASSILAPNFYPYYEFRLDAEVRSVTGKRMASPFVIQMEAK
Sequences:
>Translated_454_residues MKSAPWTICIVGIYFLLHCHSKMGTSQDWLSLFVNEDSPKVISFTPSSGSDHVSPKTEISILWSQPMEIQSCVSAFSLEP NTRGNFETTDLSLKFFPNEELSPIGYMIRLSKQCENKKGKDLDRVYSIPFSVKLGPTLPPPYIESFLISIGNTEECLSGG QIADRILGEVDSACLGNPEPSPMTIRFSKPMDQREVQLGLRLEPYGSFHLEWTDPNQVQIRFDEFLESQTRYQLILSSGI SALDGSKIQNPVSLDFFIGEGPRPPEVIGFGLASQNCGLGIQELGSMTGARWDSISCFWSRGLAILSPHDYKFRGGDNGS GESGSPNACADVSTDNFKLFFDQYVDPISVISSSRLTKISPPTSNIRLATWEWGHCQNTFPYGCREITYSFAESEASCNG SVFGNNTTGGDFNLASSILAPNFYPYYEFRLDAEVRSVTGKRMASPFVIQMEAK >Mature_454_residues MKSAPWTICIVGIYFLLHCHSKMGTSQDWLSLFVNEDSPKVISFTPSSGSDHVSPKTEISILWSQPMEIQSCVSAFSLEP NTRGNFETTDLSLKFFPNEELSPIGYMIRLSKQCENKKGKDLDRVYSIPFSVKLGPTLPPPYIESFLISIGNTEECLSGG QIADRILGEVDSACLGNPEPSPMTIRFSKPMDQREVQLGLRLEPYGSFHLEWTDPNQVQIRFDEFLESQTRYQLILSSGI SALDGSKIQNPVSLDFFIGEGPRPPEVIGFGLASQNCGLGIQELGSMTGARWDSISCFWSRGLAILSPHDYKFRGGDNGS GESGSPNACADVSTDNFKLFFDQYVDPISVISSSRLTKISPPTSNIRLATWEWGHCQNTFPYGCREITYSFAESEASCNG SVFGNNTTGGDFNLASSILAPNFYPYYEFRLDAEVRSVTGKRMASPFVIQMEAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50252; Mature: 50252
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSAPWTICIVGIYFLLHCHSKMGTSQDWLSLFVNEDSPKVISFTPSSGSDHVSPKTEIS CCCCCEEHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCEEE ILWSQPMEIQSCVSAFSLEPNTRGNFETTDLSLKFFPNEELSPIGYMIRLSKQCENKKGK EEECCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCHHHEEEEHHHHCCCCCC DLDRVYSIPFSVKLGPTLPPPYIESFLISIGNTEECLSGGQIADRILGEVDSACLGNPEP CHHHEEECCEEEEECCCCCCHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCC SPMTIRFSKPMDQREVQLGLRLEPYGSFHLEWTDPNQVQIRFDEFLESQTRYQLILSSGI CCEEEEECCCCCCCCEEECEEECCCCCEEEEECCCCEEEEEHHHHHCCHHHHHHHHHCCC SALDGSKIQNPVSLDFFIGEGPRPPEVIGFGLASQNCGLGIQELGSMTGARWDSISCFWS CCCCCCCCCCCEEEEEEECCCCCCHHHEEECCCCCCCCCCHHHHHHHCCCCCCCCHHHHH RGLAILSPHDYKFRGGDNGSGESGSPNACADVSTDNFKLFFDQYVDPISVISSSRLTKIS CCEEEECCCCEEECCCCCCCCCCCCCCCEEECCCCCEEEEHHHHCCHHHHHCCCCCEEEC PPTSNIRLATWEWGHCQNTFPYGCREITYSFAESEASCNGSVFGNNTTGGDFNLASSILA CCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHC PNFYPYYEFRLDAEVRSVTGKRMASPFVIQMEAK CCCCCEEEEEECCHHHHHHHHHCCCCEEEEEECC >Mature Secondary Structure MKSAPWTICIVGIYFLLHCHSKMGTSQDWLSLFVNEDSPKVISFTPSSGSDHVSPKTEIS CCCCCEEHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCEEE ILWSQPMEIQSCVSAFSLEPNTRGNFETTDLSLKFFPNEELSPIGYMIRLSKQCENKKGK EEECCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCHHHEEEEHHHHCCCCCC DLDRVYSIPFSVKLGPTLPPPYIESFLISIGNTEECLSGGQIADRILGEVDSACLGNPEP CHHHEEECCEEEEECCCCCCHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCC SPMTIRFSKPMDQREVQLGLRLEPYGSFHLEWTDPNQVQIRFDEFLESQTRYQLILSSGI CCEEEEECCCCCCCCEEECEEECCCCCEEEEECCCCEEEEEHHHHHCCHHHHHHHHHCCC SALDGSKIQNPVSLDFFIGEGPRPPEVIGFGLASQNCGLGIQELGSMTGARWDSISCFWS CCCCCCCCCCCEEEEEEECCCCCCHHHEEECCCCCCCCCCHHHHHHHCCCCCCCCHHHHH RGLAILSPHDYKFRGGDNGSGESGSPNACADVSTDNFKLFFDQYVDPISVISSSRLTKIS CCEEEECCCCEEECCCCCCCCCCCCCCCEEECCCCCEEEEHHHHCCHHHHHCCCCCEEEC PPTSNIRLATWEWGHCQNTFPYGCREITYSFAESEASCNGSVFGNNTTGGDFNLASSILA CCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHC PNFYPYYEFRLDAEVRSVTGKRMASPFVIQMEAK CCCCCEEEEEECCHHHHHHHHHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA