Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220391
Identifier: 183220391
GI number: 183220391
Start: 1022636
End: 1024078
Strand: Direct
Name: 183220391
Synonym: LEPBI_I0987
Alternate gene names: NA
Gene position: 1022636-1024078 (Clockwise)
Preceding gene: 183220386
Following gene: 183220392
Centisome position: 28.41
GC content: 36.94
Gene sequence:
>1443_bases GTGGGCCTCGAACGAAACGCCCAACTGAAATTGGAAAAAACAAAGTCAGGATTATTCCCAATATTACTCAGTGAAAAGTG GAAACAATACCTACCTAAATTAGGAGTTCATTATTTTGGAATTTTCTCAAGGAACCAAGAACAATTGGATCAGGAATACC GGGATGTCCGATTACAAATCCAACAGTTATTGTATGATGGAGGAGAAATCGAAAGGGACAAACAAAAAATAGAAATCAAA CAACTCATCCAATCAGAAGAAAAAAAGATCTTACGAGAAAAAATCATCCAAAACATTTCGCTTGCTTATTTGAATTTAAA CAAACGGATCCTCATTGATTCAATCTATGACTTAAGATTGGAACGATACCAGCTGGAAAAAAAGAAATCAGACTTAGAAA TCCAAACCAATTTACTCTCTCCCAATGAATTCAAATCCCAAAAACAATGGGAAGTGGAGTTTCTGGCCAAACGTTTCCAC ACACAAGCGGCGAAGGAATCTTCTCTCTTGGAACTCAAACAATCGATGTTCCTTGCTCCCAATGAAAGTTTGGTTTTGGA GCCGGGAATCACGGAACGAATTCAAATTTTTGAACCAACAAACGCACCCATTGAAGTGGATGAAAACCATCCCGTTCGGA AAAAAAATCGATTACAAATCGAACTCAGTAATTTGGAAGAAGAGTCCTTAAAAAACGATTGGAAACCAAAACTCGTATTA GGTGGTTATTTTGGAAGGAATGGTAATAATGGATTCCCTTTACAAAATGAAATTTATGGTGTGAGTTTAGGTTTCCAGGC AAACTTAGGTGGATCTAGTTTTGTATCCAATACACAAAACGGTTTCCAATCGGAAGGGAATGGAATCCAGAGGATTCCTG GTTATGGCCCACAGGCTGTAGGCCCTGGTGAAAATGCATTCCAAAGTGGATCGATTGGACTTTTTGATGAAGTGGGTCGT GATAAAAAACGTTTCGATTCTCAATTGTCGCAATTCCAAATCCATTCCGAAAAAGAACAAACGGAACTTTTCCTGAGAAA TACTTCTAAATCCATTGAAGTGAGATTAAGGGAAGAATATTCAAAATACTCATTGTATTTGGATTATGTTCAGTCTGCAT TCCATTCTCTCAAACAGAAACGAGAGGAAAAAAAACTAAATCTCATTTCAGACCTTGAATATTTGAGAGTGGAAGAAGAA GTTTTTATCGCCTTAGAGAAAAGTATCGAACATTATTTTAATTATATTTCAACTGCTTTCGAATTGGTGATCCTTTTGGG AGAGGATCCTTTTCGAAATCGATACTACCAAGTACATCATTCCAAATACAAAAGTATGTTCACAGAACTCCTCTTCGATT GGAAAGAACTGACCCCAAAAGAAAATTTACAACCCAGAGGACCAAAGAAACAAAAATTAACCCCTTTCTTTTTGGAGGAA TGA
Upstream 100 bases:
>100_bases TGATATGTGGCGACTCTCCTGGGTTTGGTTCTTCCTTTGTTATTTTGGAATATGTTCCTTGTCTGCAAGTGAATTATTCC TTTGGGAGGATTGCCTTTGG
Downstream 100 bases:
>100_bases AATGAAATCCGCACCATGGACAATTTGTATTGTTGGGATTTATTTTCTTTTGCATTGCCATTCTAAAATGGGAACGTCGC AAGATTGGTTGAGTTTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 480; Mature: 479
Protein sequence:
>480_residues MGLERNAQLKLEKTKSGLFPILLSEKWKQYLPKLGVHYFGIFSRNQEQLDQEYRDVRLQIQQLLYDGGEIERDKQKIEIK QLIQSEEKKILREKIIQNISLAYLNLNKRILIDSIYDLRLERYQLEKKKSDLEIQTNLLSPNEFKSQKQWEVEFLAKRFH TQAAKESSLLELKQSMFLAPNESLVLEPGITERIQIFEPTNAPIEVDENHPVRKKNRLQIELSNLEEESLKNDWKPKLVL GGYFGRNGNNGFPLQNEIYGVSLGFQANLGGSSFVSNTQNGFQSEGNGIQRIPGYGPQAVGPGENAFQSGSIGLFDEVGR DKKRFDSQLSQFQIHSEKEQTELFLRNTSKSIEVRLREEYSKYSLYLDYVQSAFHSLKQKREEKKLNLISDLEYLRVEEE VFIALEKSIEHYFNYISTAFELVILLGEDPFRNRYYQVHHSKYKSMFTELLFDWKELTPKENLQPRGPKKQKLTPFFLEE
Sequences:
>Translated_480_residues MGLERNAQLKLEKTKSGLFPILLSEKWKQYLPKLGVHYFGIFSRNQEQLDQEYRDVRLQIQQLLYDGGEIERDKQKIEIK QLIQSEEKKILREKIIQNISLAYLNLNKRILIDSIYDLRLERYQLEKKKSDLEIQTNLLSPNEFKSQKQWEVEFLAKRFH TQAAKESSLLELKQSMFLAPNESLVLEPGITERIQIFEPTNAPIEVDENHPVRKKNRLQIELSNLEEESLKNDWKPKLVL GGYFGRNGNNGFPLQNEIYGVSLGFQANLGGSSFVSNTQNGFQSEGNGIQRIPGYGPQAVGPGENAFQSGSIGLFDEVGR DKKRFDSQLSQFQIHSEKEQTELFLRNTSKSIEVRLREEYSKYSLYLDYVQSAFHSLKQKREEKKLNLISDLEYLRVEEE VFIALEKSIEHYFNYISTAFELVILLGEDPFRNRYYQVHHSKYKSMFTELLFDWKELTPKENLQPRGPKKQKLTPFFLEE >Mature_479_residues GLERNAQLKLEKTKSGLFPILLSEKWKQYLPKLGVHYFGIFSRNQEQLDQEYRDVRLQIQQLLYDGGEIERDKQKIEIKQ LIQSEEKKILREKIIQNISLAYLNLNKRILIDSIYDLRLERYQLEKKKSDLEIQTNLLSPNEFKSQKQWEVEFLAKRFHT QAAKESSLLELKQSMFLAPNESLVLEPGITERIQIFEPTNAPIEVDENHPVRKKNRLQIELSNLEEESLKNDWKPKLVLG GYFGRNGNNGFPLQNEIYGVSLGFQANLGGSSFVSNTQNGFQSEGNGIQRIPGYGPQAVGPGENAFQSGSIGLFDEVGRD KKRFDSQLSQFQIHSEKEQTELFLRNTSKSIEVRLREEYSKYSLYLDYVQSAFHSLKQKREEKKLNLISDLEYLRVEEEV FIALEKSIEHYFNYISTAFELVILLGEDPFRNRYYQVHHSKYKSMFTELLFDWKELTPKENLQPRGPKKQKLTPFFLEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56242; Mature: 56110
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLERNAQLKLEKTKSGLFPILLSEKWKQYLPKLGVHYFGIFSRNQEQLDQEYRDVRLQI CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCHHEEEECCCHHHHHHHHHHHHHHH QQLLYDGGEIERDKQKIEIKQLIQSEEKKILREKIIQNISLAYLNLNKRILIDSIYDLRL HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCEEEHHHHHHHHH ERYQLEKKKSDLEIQTNLLSPNEFKSQKQWEVEFLAKRFHTQAAKESSLLELKQSMFLAP HHHHHHHHCCCCEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NESLVLEPGITERIQIFEPTNAPIEVDENHPVRKKNRLQIELSNLEEESLKNDWKPKLVL CCCEEECCCCCCEEEEECCCCCCEEECCCCCCCCCCCEEEEECCCCHHHHHCCCCCEEEE GGYFGRNGNNGFPLQNEIYGVSLGFQANLGGSSFVSNTQNGFQSEGNGIQRIPGYGPQAV EEECCCCCCCCCCCCCCEEEEEECEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC GPGENAFQSGSIGLFDEVGRDKKRFDSQLSQFQIHSEKEQTELFLRNTSKSIEVRLREEY CCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEHHHH SKYSLYLDYVQSAFHSLKQKREEKKLNLISDLEYLRVEEEVFIALEKSIEHYFNYISTAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELVILLGEDPFRNRYYQVHHSKYKSMFTELLFDWKELTPKENLQPRGPKKQKLTPFFLEE HEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCC >Mature Secondary Structure GLERNAQLKLEKTKSGLFPILLSEKWKQYLPKLGVHYFGIFSRNQEQLDQEYRDVRLQI CCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCHHEEEECCCHHHHHHHHHHHHHHH QQLLYDGGEIERDKQKIEIKQLIQSEEKKILREKIIQNISLAYLNLNKRILIDSIYDLRL HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCEEEHHHHHHHHH ERYQLEKKKSDLEIQTNLLSPNEFKSQKQWEVEFLAKRFHTQAAKESSLLELKQSMFLAP HHHHHHHHCCCCEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NESLVLEPGITERIQIFEPTNAPIEVDENHPVRKKNRLQIELSNLEEESLKNDWKPKLVL CCCEEECCCCCCEEEEECCCCCCEEECCCCCCCCCCCEEEEECCCCHHHHHCCCCCEEEE GGYFGRNGNNGFPLQNEIYGVSLGFQANLGGSSFVSNTQNGFQSEGNGIQRIPGYGPQAV EEECCCCCCCCCCCCCCEEEEEECEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC GPGENAFQSGSIGLFDEVGRDKKRFDSQLSQFQIHSEKEQTELFLRNTSKSIEVRLREEY CCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEHHHH SKYSLYLDYVQSAFHSLKQKREEKKLNLISDLEYLRVEEEVFIALEKSIEHYFNYISTAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELVILLGEDPFRNRYYQVHHSKYKSMFTELLFDWKELTPKENLQPRGPKKQKLTPFFLEE HEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA