Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220390
Identifier: 183220390
GI number: 183220390
Start: 1021696
End: 1022436
Strand: Reverse
Name: 183220390
Synonym: LEPBI_I0986
Alternate gene names: NA
Gene position: 1022436-1021696 (Counterclockwise)
Preceding gene: 183220401
Following gene: 183220389
Centisome position: 28.4
GC content: 41.57
Gene sequence:
>741_bases GTGCCTTATAAAAGTGGCATGATCCGTTTGATTCCTTTCTTTTTGTTTATCTTTACCGCCACGACTGTATTTGCTGATGA AGTGGGAGTGGTTAGTTTCATCCAAGGAAACAATTACATTTCTGGACCTCGTTTTAAAAAAGCAAAAGAACCAGTGAGAT TAGGGAGTGTCCTAAAAAAAGGCGACACCATCACTTCCGAAGATGGAACTTGCGAAATCCAATTGGCAACACAAGCCACC ATCCGGCTCTCAAAATTTTCTTCCATCCGCATCGACGACTTACTCAATCCTAAAACCAAGTCCACCACTCTCAACTTAGT TGGTGGAAAATTATTTGTGAAAGCACACAAACCACCAGGTGGTGGTCCAAGCGACACTGAACTCAGTGTAGTCAATCCTA GTTTTGTGGCAGGGGTTCGGGGAACCGAATTCCTTGTGGCAACACCAAACCAAGGTGGAGAGGACGAAGAATTGAAAGAT GTGGAAACCGGTGTTTATGTCAACGAAGGGACCGTCGCGGTTAGCCCTGACAAAAAAGGCAAACAAACCTTAGTTGGTGA AAATGAAGAGGTTGTCGTTTCTGGCAAACAACTGAAAAAACAAATCTTAGATGAATTTGTAAAAGAAAAAATGCATATCT TTGAGCAGTTCAAAGCCATCAAAGAAGAAAACTACCAACGCATCAAAGAACAGTATGAAAAAAATGATCAAATCATGAAC GACTACAAAGGCCAAGGTTAA
Upstream 100 bases:
>100_bases AAGAGATAGGTGGTCAGAAATGATATTGGTTCTAAATTTTTAGATTTGTAGGGATTTTTTTGATTTTTTTTTCTGTTTTT TGGCTTGTAAGTGAACGCTC
Downstream 100 bases:
>100_bases TCATGAAACGTTTTTTGGTAATTTTTTCTGTAGCCAGTCTGTCTGTCTTTTCTGCGGATCGAATTGGCACAACTCCGGTG TACAAAATCGCAGTGGAAGC
Product: putative signal peptide
Products: NA
Alternate protein names: Signal Peptide; LipL45-Related Protein
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MPYKSGMIRLIPFFLFIFTATTVFADEVGVVSFIQGNNYISGPRFKKAKEPVRLGSVLKKGDTITSEDGTCEIQLATQAT IRLSKFSSIRIDDLLNPKTKSTTLNLVGGKLFVKAHKPPGGGPSDTELSVVNPSFVAGVRGTEFLVATPNQGGEDEELKD VETGVYVNEGTVAVSPDKKGKQTLVGENEEVVVSGKQLKKQILDEFVKEKMHIFEQFKAIKEENYQRIKEQYEKNDQIMN DYKGQG
Sequences:
>Translated_246_residues MPYKSGMIRLIPFFLFIFTATTVFADEVGVVSFIQGNNYISGPRFKKAKEPVRLGSVLKKGDTITSEDGTCEIQLATQAT IRLSKFSSIRIDDLLNPKTKSTTLNLVGGKLFVKAHKPPGGGPSDTELSVVNPSFVAGVRGTEFLVATPNQGGEDEELKD VETGVYVNEGTVAVSPDKKGKQTLVGENEEVVVSGKQLKKQILDEFVKEKMHIFEQFKAIKEENYQRIKEQYEKNDQIMN DYKGQG >Mature_245_residues PYKSGMIRLIPFFLFIFTATTVFADEVGVVSFIQGNNYISGPRFKKAKEPVRLGSVLKKGDTITSEDGTCEIQLATQATI RLSKFSSIRIDDLLNPKTKSTTLNLVGGKLFVKAHKPPGGGPSDTELSVVNPSFVAGVRGTEFLVATPNQGGEDEELKDV ETGVYVNEGTVAVSPDKKGKQTLVGENEEVVVSGKQLKKQILDEFVKEKMHIFEQFKAIKEENYQRIKEQYEKNDQIMND YKGQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27201; Mature: 27070
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYKSGMIRLIPFFLFIFTATTVFADEVGVVSFIQGNNYISGPRFKKAKEPVRLGSVLKK CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHCCHHHHHHHHHC GDTITSEDGTCEIQLATQATIRLSKFSSIRIDDLLNPKTKSTTLNLVGGKLFVKAHKPPG CCCCCCCCCEEEEEEECCEEEEEHHCCCEEHHHCCCCCCCCEEEEEECCEEEEEECCCCC GGPSDTELSVVNPSFVAGVRGTEFLVATPNQGGEDEELKDVETGVYVNEGTVAVSPDKKG CCCCCCEEEEECCHHEECCCCCEEEEECCCCCCCCHHHHHHHCCEEEECCEEEECCCCCC KQTLVGENEEVVVSGKQLKKQILDEFVKEKMHIFEQFKAIKEENYQRIKEQYEKNDQIMN CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH DYKGQG HCCCCC >Mature Secondary Structure PYKSGMIRLIPFFLFIFTATTVFADEVGVVSFIQGNNYISGPRFKKAKEPVRLGSVLKK CCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHCCHHHHHHHHHC GDTITSEDGTCEIQLATQATIRLSKFSSIRIDDLLNPKTKSTTLNLVGGKLFVKAHKPPG CCCCCCCCCEEEEEEECCEEEEEHHCCCEEHHHCCCCCCCCEEEEEECCEEEEEECCCCC GGPSDTELSVVNPSFVAGVRGTEFLVATPNQGGEDEELKDVETGVYVNEGTVAVSPDKKG CCCCCCEEEEECCHHEECCCCCEEEEECCCCCCCCHHHHHHHCCEEEECCEEEECCCCCC KQTLVGENEEVVVSGKQLKKQILDEFVKEKMHIFEQFKAIKEENYQRIKEQYEKNDQIMN CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH DYKGQG HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA