Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
---|---|
Accession | NC_010602 |
Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183220389
Identifier: 183220389
GI number: 183220389
Start: 1020776
End: 1021693
Strand: Reverse
Name: 183220389
Synonym: LEPBI_I0985
Alternate gene names: NA
Gene position: 1021693-1020776 (Counterclockwise)
Preceding gene: 183220390
Following gene: 183220388
Centisome position: 28.38
GC content: 44.34
Gene sequence:
>918_bases ATGAAACGTTTTTTGGTAATTTTTTCTGTAGCCAGTCTGTCTGTCTTTTCTGCGGATCGAATTGGCACAACTCCGGTGTA CAAAATCGCAGTGGAAGCCTACCCTTCCACGGAAGAAAGTAGAGCCTTACGTGATTTTATCAAAGAACAAATCCAATCCA CAAGTCGTGGCCAAGTGACTGCCACGTTTCCAGATTCGGAAATCAGGACTTGGGAGTTTGACAAACGTGGTGATGCCACA ATCGAAACAAAAGCCAATCTCCAATCGCTCACACAAGTTGATAAATTGGTTTTGGTTTCTACAGAAGATGGACAGGCGCT GATTTCCTTTGTGGATGTGTTACACGAAACATTGGAATACCGAAACGCCCTACCGGAATCGCTTTCCAAAACACTGGTTT CTGATTTTTTAAGTTACTTAGACAAAAAAAATATCTACCTTGCCCTCTCCCATACGGGTGCAAGTTCTTCTTCCCAGGTC AAAATCAATTCTCTCAAATCCACCTATGTGGCTGGAGAACCGATTCGTTTTGAAATCGAAACCACTGAAGACAATTATGT TTATGTTGTCCTCGTCCCAGAGAACCAAAAAGGGGAACCAGTCCTGCTTTTCCCAAACCAAATGCAAAATGATAATTTTG TAAAAAAAGGGGAACGGGTGACCATCCCGGACAAACGTATCTCGTTAAAGGCTTCCCCAAGCCCATCCAAAGATCGGATC CGTGCCTTTGTGACAAGGGATGAATGGAAAGAATACCAACTCCGTGGGAAAAAGGAAGATTCCTTTTACCGACTGTTGCC TCCAGCTGTGACTGGCACAAAAACCTTAGCACGTTCCCTAACGCCTCCTCCGACTTTGACCTCTCCCATCGAAGAGAGTT TAGTCACTGAGTGGGAGTACGAAATCCTTTCCCGTTAA
Upstream 100 bases:
>100_bases AGCAGTTCAAAGCCATCAAAGAAGAAAACTACCAACGCATCAAAGAACAGTATGAAAAAAATGATCAAATCATGAACGAC TACAAAGGCCAAGGTTAATC
Downstream 100 bases:
>100_bases TTTTCTTGCAAAAACTCCTCATACCTTTTGTTATATAAGGTATGAGAGCCAACCTTTCCAAACTCCTCACCATTTTTCTC TTCGGTTCCTTGGTATCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MKRFLVIFSVASLSVFSADRIGTTPVYKIAVEAYPSTEESRALRDFIKEQIQSTSRGQVTATFPDSEIRTWEFDKRGDAT IETKANLQSLTQVDKLVLVSTEDGQALISFVDVLHETLEYRNALPESLSKTLVSDFLSYLDKKNIYLALSHTGASSSSQV KINSLKSTYVAGEPIRFEIETTEDNYVYVVLVPENQKGEPVLLFPNQMQNDNFVKKGERVTIPDKRISLKASPSPSKDRI RAFVTRDEWKEYQLRGKKEDSFYRLLPPAVTGTKTLARSLTPPPTLTSPIEESLVTEWEYEILSR
Sequences:
>Translated_305_residues MKRFLVIFSVASLSVFSADRIGTTPVYKIAVEAYPSTEESRALRDFIKEQIQSTSRGQVTATFPDSEIRTWEFDKRGDAT IETKANLQSLTQVDKLVLVSTEDGQALISFVDVLHETLEYRNALPESLSKTLVSDFLSYLDKKNIYLALSHTGASSSSQV KINSLKSTYVAGEPIRFEIETTEDNYVYVVLVPENQKGEPVLLFPNQMQNDNFVKKGERVTIPDKRISLKASPSPSKDRI RAFVTRDEWKEYQLRGKKEDSFYRLLPPAVTGTKTLARSLTPPPTLTSPIEESLVTEWEYEILSR >Mature_305_residues MKRFLVIFSVASLSVFSADRIGTTPVYKIAVEAYPSTEESRALRDFIKEQIQSTSRGQVTATFPDSEIRTWEFDKRGDAT IETKANLQSLTQVDKLVLVSTEDGQALISFVDVLHETLEYRNALPESLSKTLVSDFLSYLDKKNIYLALSHTGASSSSQV KINSLKSTYVAGEPIRFEIETTEDNYVYVVLVPENQKGEPVLLFPNQMQNDNFVKKGERVTIPDKRISLKASPSPSKDRI RAFVTRDEWKEYQLRGKKEDSFYRLLPPAVTGTKTLARSLTPPPTLTSPIEESLVTEWEYEILSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34502; Mature: 34502
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFLVIFSVASLSVFSADRIGTTPVYKIAVEAYPSTEESRALRDFIKEQIQSTSRGQVT CCEEEEEEEEHHHHEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEE ATFPDSEIRTWEFDKRGDATIETKANLQSLTQVDKLVLVSTEDGQALISFVDVLHETLEY EECCCCCCEEEECCCCCCCEEEEHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHH RNALPESLSKTLVSDFLSYLDKKNIYLALSHTGASSSSQVKINSLKSTYVAGEPIRFEIE HHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEECCCCCEECCCCEEEEEE TTEDNYVYVVLVPENQKGEPVLLFPNQMQNDNFVKKGERVTIPDKRISLKASPSPSKDRI ECCCCEEEEEEEECCCCCCEEEECCCCCCCCCHHHCCCEEECCCCEEEEECCCCCCHHHE RAFVTRDEWKEYQLRGKKEDSFYRLLPPAVTGTKTLARSLTPPPTLTSPIEESLVTEWEY EEEEEHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHH EILSR HHHCC >Mature Secondary Structure MKRFLVIFSVASLSVFSADRIGTTPVYKIAVEAYPSTEESRALRDFIKEQIQSTSRGQVT CCEEEEEEEEHHHHEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEE ATFPDSEIRTWEFDKRGDATIETKANLQSLTQVDKLVLVSTEDGQALISFVDVLHETLEY EECCCCCCEEEECCCCCCCEEEEHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHH RNALPESLSKTLVSDFLSYLDKKNIYLALSHTGASSSSQVKINSLKSTYVAGEPIRFEIE HHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEECCCCCEECCCCEEEEEE TTEDNYVYVVLVPENQKGEPVLLFPNQMQNDNFVKKGERVTIPDKRISLKASPSPSKDRI ECCCCEEEEEEEECCCCCCEEEECCCCCCCCCHHHCCCEEECCCCEEEEECCCCCCHHHE RAFVTRDEWKEYQLRGKKEDSFYRLLPPAVTGTKTLARSLTPPPTLTSPIEESLVTEWEY EEEEEHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHH EILSR HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA