Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220381
Identifier: 183220381
GI number: 183220381
Start: 1013089
End: 1013523
Strand: Direct
Name: 183220381
Synonym: LEPBI_I0977
Alternate gene names: NA
Gene position: 1013089-1013523 (Clockwise)
Preceding gene: 183220379
Following gene: 183220382
Centisome position: 28.14
GC content: 34.25
Gene sequence:
>435_bases TTGTTACGAAAGGTAAATATAACAAATTTAGGATTTCTGTTTCTAATTCAAGTCAATTTGTTCGTTTTCTGTCACAAATC GAATTCTAAAACAGAGTTGTGGACTCATCCTGTGCCTGATGTAGCAAAAACAACTGCTGTTTATGGAGAAATCCAAAATC AAACGGAATCTGAGATTTCCATTCTTTCCCTCAAAAGTAACCACTACAAAAGAGTAGAATTCCATACAATGGTAGAAGAC AAGGAAGGAATCATGCGTATGCGAAAACTAGAATTTCCCGTTTCCTTAAAACCCAAAGAATCCATTCGTTTAGAAAGAAA TGGCACTCATCTGATGTTATATGACAAACAAAACATGGATGGTGAATTAGAAATCAGCATTCAATATTCAAATGGAACAG TGAAGAAACAAGTTGTGGAGAAAAAATCGTTATGA
Upstream 100 bases:
>100_bases GTATTCACCAGTAGACCAGTTGTAAGTGGATAGGAGAAAGGAAGAAAGAATGAGAGTGATTGCGGTCACCCATTTGATTA TTAATCTCATCGAGGTTCTC
Downstream 100 bases:
>100_bases AACAATATACGATAAGAACCTTAATATCAATATTTATTTTTGCACTTCTCCAATGTGGTTCCGGAATTGAGCTCACCGAA CTTCCGATTGGTGGAAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MLRKVNITNLGFLFLIQVNLFVFCHKSNSKTELWTHPVPDVAKTTAVYGEIQNQTESEISILSLKSNHYKRVEFHTMVED KEGIMRMRKLEFPVSLKPKESIRLERNGTHLMLYDKQNMDGELEISIQYSNGTVKKQVVEKKSL
Sequences:
>Translated_144_residues MLRKVNITNLGFLFLIQVNLFVFCHKSNSKTELWTHPVPDVAKTTAVYGEIQNQTESEISILSLKSNHYKRVEFHTMVED KEGIMRMRKLEFPVSLKPKESIRLERNGTHLMLYDKQNMDGELEISIQYSNGTVKKQVVEKKSL >Mature_144_residues MLRKVNITNLGFLFLIQVNLFVFCHKSNSKTELWTHPVPDVAKTTAVYGEIQNQTESEISILSLKSNHYKRVEFHTMVED KEGIMRMRKLEFPVSLKPKESIRLERNGTHLMLYDKQNMDGELEISIQYSNGTVKKQVVEKKSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16757; Mature: 16757
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRKVNITNLGFLFLIQVNLFVFCHKSNSKTELWTHPVPDVAKTTAVYGEIQNQTESEIS CCEEECCCCCHHEEEEEEEEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEE ILSLKSNHYKRVEFHTMVEDKEGIMRMRKLEFPVSLKPKESIRLERNGTHLMLYDKQNMD EEEECCCCEEEEEEEEEECCHHHHHHHHHHCCCCCCCCCHHEEEECCCCEEEEEECCCCC GELEISIQYSNGTVKKQVVEKKSL CEEEEEEEECCCCHHHHHHHHCCC >Mature Secondary Structure MLRKVNITNLGFLFLIQVNLFVFCHKSNSKTELWTHPVPDVAKTTAVYGEIQNQTESEIS CCEEECCCCCHHEEEEEEEEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEE ILSLKSNHYKRVEFHTMVEDKEGIMRMRKLEFPVSLKPKESIRLERNGTHLMLYDKQNMD EEEECCCCEEEEEEEEEECCHHHHHHHHHHCCCCCCCCCHHEEEECCCCEEEEEECCCCC GELEISIQYSNGTVKKQVVEKKSL CEEEEEEEECCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA