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The map label for this gene is 183220382

Identifier: 183220382

GI number: 183220382

Start: 1013520

End: 1014095

Strand: Direct

Name: 183220382

Synonym: LEPBI_I0978

Alternate gene names: NA

Gene position: 1013520-1014095 (Clockwise)

Preceding gene: 183220381

Following gene: 183220384

Centisome position: 28.16

GC content: 37.33

Gene sequence:

>576_bases
ATGAAACAATATACGATAAGAACCTTAATATCAATATTTATTTTTGCACTTCTCCAATGTGGTTCCGGAATTGAGCTCAC
CGAACTTCCGATTGGTGGAAATATTGAAGCCATCGACAAAACAGGGACAAAGGTGAATTTACAATCATTCCCCGAACCAG
TGTTACTTGTTTTTTTTGGATATACATACTGTCCTGATTTTTGCCCAAACACATTCGCCAAAATCAAAGCCGCAACAGAA
GGACTTTCTTCTCTAGAGAAGAATCACTTCCGAGTGATTTTTGTTTCCATCGATCCAGAACGTGATTCTACAGAAACGGT
AAACAAATATGTACAGTTTTATATTCCGAATGCATCTGGTTTTAGTTTTGATTTAGCAACGACAAACCAAATTGTTAAAC
AATATGCCGCCTATGTGGAAAAAACAAAAGACGGCCTATCATTCGATCACTCTACCTATGTTTATGTTTTGGACTCAAAA
CGGAAAACTCGAAAACTCATCAAGTCAACCGATCCAAAAGAAGTGATCACAAAAACAATACAGGCGTTAAGCGGCAATTC
CGTTCAATCGAAGTAA

Upstream 100 bases:

>100_bases
TGATGTTATATGACAAACAAAACATGGATGGTGAATTAGAAATCAGCATTCAATATTCAAATGGAACAGTGAAGAAACAA
GTTGTGGAGAAAAAATCGTT

Downstream 100 bases:

>100_bases
AGCATCGATGTCTGGGTCTTTTCCATAAAAATCTCGGAAAAGATTCATCGCATTGGCTGACCCACCTTTTTCCAAAACGG
TCTTTCGAAAATGTGCCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MKQYTIRTLISIFIFALLQCGSGIELTELPIGGNIEAIDKTGTKVNLQSFPEPVLLVFFGYTYCPDFCPNTFAKIKAATE
GLSSLEKNHFRVIFVSIDPERDSTETVNKYVQFYIPNASGFSFDLATTNQIVKQYAAYVEKTKDGLSFDHSTYVYVLDSK
RKTRKLIKSTDPKEVITKTIQALSGNSVQSK

Sequences:

>Translated_191_residues
MKQYTIRTLISIFIFALLQCGSGIELTELPIGGNIEAIDKTGTKVNLQSFPEPVLLVFFGYTYCPDFCPNTFAKIKAATE
GLSSLEKNHFRVIFVSIDPERDSTETVNKYVQFYIPNASGFSFDLATTNQIVKQYAAYVEKTKDGLSFDHSTYVYVLDSK
RKTRKLIKSTDPKEVITKTIQALSGNSVQSK
>Mature_191_residues
MKQYTIRTLISIFIFALLQCGSGIELTELPIGGNIEAIDKTGTKVNLQSFPEPVLLVFFGYTYCPDFCPNTFAKIKAATE
GLSSLEKNHFRVIFVSIDPERDSTETVNKYVQFYIPNASGFSFDLATTNQIVKQYAAYVEKTKDGLSFDHSTYVYVLDSK
RKTRKLIKSTDPKEVITKTIQALSGNSVQSK

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SCO1/2 family [H]

Homologues:

Organism=Homo sapiens, GI4759068, Length=132, Percent_Identity=26.5151515151515, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17531419, Length=135, Percent_Identity=29.6296296296296, Blast_Score=72, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6319498, Length=136, Percent_Identity=25, Blast_Score=62, Evalue=6e-11,
Organism=Drosophila melanogaster, GI19920710, Length=115, Percent_Identity=33.0434782608696, Blast_Score=80, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003782
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02630 SCO1-SenC [H]

EC number: NA

Molecular weight: Translated: 21408; Mature: 21408

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQYTIRTLISIFIFALLQCGSGIELTELPIGGNIEAIDKTGTKVNLQSFPEPVLLVFFG
CCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEECCCCEEEHHHCCCHHHHHHHH
YTYCPDFCPNTFAKIKAATEGLSSLEKNHFRVIFVSIDPERDSTETVNKYVQFYIPNASG
HHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHEEECCCCCC
FSFDLATTNQIVKQYAAYVEKTKDGLSFDHSTYVYVLDSKRKTRKLIKSTDPKEVITKTI
CEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHCCCHHHHHHHHH
QALSGNSVQSK
HHHCCCCCCCC
>Mature Secondary Structure
MKQYTIRTLISIFIFALLQCGSGIELTELPIGGNIEAIDKTGTKVNLQSFPEPVLLVFFG
CCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEECCCCEEEHHHCCCHHHHHHHH
YTYCPDFCPNTFAKIKAATEGLSSLEKNHFRVIFVSIDPERDSTETVNKYVQFYIPNASG
HHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHEEECCCCCC
FSFDLATTNQIVKQYAAYVEKTKDGLSFDHSTYVYVLDSKRKTRKLIKSTDPKEVITKTI
CEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHCCCHHHHHHHHH
QALSGNSVQSK
HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA