Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220354
Identifier: 183220354
GI number: 183220354
Start: 982280
End: 982564
Strand: Direct
Name: 183220354
Synonym: LEPBI_I0950
Alternate gene names: NA
Gene position: 982280-982564 (Clockwise)
Preceding gene: 183220353
Following gene: 183220355
Centisome position: 27.29
GC content: 45.26
Gene sequence:
>285_bases ATGTCTTCGTTTCCGGTTCTCAATGTAGGATTCTCGAATGTTGTCTTTGTTTCGAAGATTCTGACCATTTTACTGGCAGA CTCCGCGGGAGCAAAACGACTGAGAACAGAAGCAAAATCAGAAAATCGATTGATTGATGCGACTTGTGGTCGTAAAACTA GATCGGTTCTCGTCTTGGAATCAGGCCATATCCTCCTCTCTGCGATTCGACCAGAAAGTTTGTCCAAACGATTGGAAACA GGGGACAACCACATTGGAGAAGGGGAAGAGGAGTCGGAAGATTGA
Upstream 100 bases:
>100_bases CGACGAAATCTCCGAAGCTATGAATATAGGAATCCATGAAATTCATTTGATCGAAACGATTCGACTTGATCGATCCAGAA GAATCTAAAAATATGTTTCC
Downstream 100 bases:
>100_bases AAGCTGTCCCGAATTTATATATCATTTCCTCGGTGGCTGGTGGTGGGAAATCGACCATCATCCAAGCACTCTTAAAAGAA AACCCTGAGTTTTATTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MSSFPVLNVGFSNVVFVSKILTILLADSAGAKRLRTEAKSENRLIDATCGRKTRSVLVLESGHILLSAIRPESLSKRLET GDNHIGEGEEESED
Sequences:
>Translated_94_residues MSSFPVLNVGFSNVVFVSKILTILLADSAGAKRLRTEAKSENRLIDATCGRKTRSVLVLESGHILLSAIRPESLSKRLET GDNHIGEGEEESED >Mature_93_residues SSFPVLNVGFSNVVFVSKILTILLADSAGAKRLRTEAKSENRLIDATCGRKTRSVLVLESGHILLSAIRPESLSKRLETG DNHIGEGEEESED
Specific function: Unknown
COG id: COG2052
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0296 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y916_LEPBA (B0SDZ6)
Other databases:
- EMBL: CP000777 - RefSeq: YP_001962024.1 - GeneID: 6389709 - GenomeReviews: CP000777_GR - KEGG: lbf:LBF_0916 - HOGENOM: HBG286498 - OMA: KRIISDA - ProtClustDB: PRK04323 - BioCyc: LBIF355278:LBF_0916-MONOMER - HAMAP: MF_01503 - InterPro: IPR007169 - ProDom: PD063023
Pfam domain/function: PF04025 DUF370
EC number: NA
Molecular weight: Translated: 10212; Mature: 10081
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSFPVLNVGFSNVVFVSKILTILLADSAGAKRLRTEAKSENRLIDATCGRKTRSVLVLE CCCCCEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEECCCCCCCCEEEEEE SGHILLSAIRPESLSKRLETGDNHIGEGEEESED CCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SSFPVLNVGFSNVVFVSKILTILLADSAGAKRLRTEAKSENRLIDATCGRKTRSVLVLE CCCCEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEECCCCCCCCEEEEEE SGHILLSAIRPESLSKRLETGDNHIGEGEEESED CCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA