Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is gmk [H]
Identifier: 183220355
GI number: 183220355
Start: 982561
End: 983124
Strand: Direct
Name: gmk [H]
Synonym: LEPBI_I0951
Alternate gene names: 183220355
Gene position: 982561-983124 (Clockwise)
Preceding gene: 183220354
Following gene: 183220358
Centisome position: 27.3
GC content: 41.49
Gene sequence:
>564_bases TTGAAAGCTGTCCCGAATTTATATATCATTTCCTCGGTGGCTGGTGGTGGGAAATCGACCATCATCCAAGCACTCTTAAA AGAAAACCCTGAGTTTTATTTTTCGATCTCGTGTACAACACGTGACCCAAGGCCTGGGGATGAGGAAGGAAAAACATATT ACTTTTTAACCATACCTGAATTCCAAAAAAAAATTGCCGATGGTGAATTTTACGAATGGGCTGAAGTCCATGGCAATTAT TACGGAACACCAAAGGCTCCCATTTTAGATGCCATAAAGGAACACCGAGTGGCACTTATGGATTTAGATGTCCAAGGAGC CAAATCAGTCAAACAACTAAGGCCTGAGTCGGTTACCATTTTTATCGAACCACCAAGCCGGGAAATTTGGATTGAGAGAC TCATCAGACGAGGGACGGATTCCAAAACGAGTATCGAAAAACGGATAGAAAATGGGATCATCGAATTAGATGAAGCACCT AGCTTTGATTATGTGGTCATAAATGATCGCTTAGAAGATGCCATTACTGAAGTAAAGGCCATCCTTTGTGGAACCAAATC ATAA
Upstream 100 bases:
>100_bases CAGGCCATATCCTCCTCTCTGCGATTCGACCAGAAAGTTTGTCCAAACGATTGGAAACAGGGGACAACCACATTGGAGAA GGGGAAGAGGAGTCGGAAGA
Downstream 100 bases:
>100_bases GAATCAATTCATAATTCTGATTTGGGACATCGTATCACTTGGATCAATACCGATGTAAAAACACTTTCTCTTACGGCTCT TCGTTTTCCTCATCGATACT
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase [H]
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MKAVPNLYIISSVAGGGKSTIIQALLKENPEFYFSISCTTRDPRPGDEEGKTYYFLTIPEFQKKIADGEFYEWAEVHGNY YGTPKAPILDAIKEHRVALMDLDVQGAKSVKQLRPESVTIFIEPPSREIWIERLIRRGTDSKTSIEKRIENGIIELDEAP SFDYVVINDRLEDAITEVKAILCGTKS
Sequences:
>Translated_187_residues MKAVPNLYIISSVAGGGKSTIIQALLKENPEFYFSISCTTRDPRPGDEEGKTYYFLTIPEFQKKIADGEFYEWAEVHGNY YGTPKAPILDAIKEHRVALMDLDVQGAKSVKQLRPESVTIFIEPPSREIWIERLIRRGTDSKTSIEKRIENGIIELDEAP SFDYVVINDRLEDAITEVKAILCGTKS >Mature_187_residues MKAVPNLYIISSVAGGGKSTIIQALLKENPEFYFSISCTTRDPRPGDEEGKTYYFLTIPEFQKKIADGEFYEWAEVHGNY YGTPKAPILDAIKEHRVALMDLDVQGAKSVKQLRPESVTIFIEPPSREIWIERLIRRGTDSKTSIEKRIENGIIELDEAP SFDYVVINDRLEDAITEVKAILCGTKS
Specific function: Essential for recycling GMP and indirectly, cGMP [H]
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain [H]
Homologues:
Organism=Homo sapiens, GI226874833, Length=185, Percent_Identity=39.4594594594595, Blast_Score=136, Evalue=1e-32, Organism=Homo sapiens, GI4504221, Length=185, Percent_Identity=39.4594594594595, Blast_Score=136, Evalue=1e-32, Organism=Homo sapiens, GI226874831, Length=185, Percent_Identity=39.4594594594595, Blast_Score=136, Evalue=1e-32, Organism=Homo sapiens, GI4505237, Length=172, Percent_Identity=27.906976744186, Blast_Score=83, Evalue=1e-16, Organism=Homo sapiens, GI262118259, Length=172, Percent_Identity=27.906976744186, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI262118255, Length=172, Percent_Identity=27.906976744186, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI262118263, Length=172, Percent_Identity=27.906976744186, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI38570142, Length=168, Percent_Identity=29.7619047619048, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI186700627, Length=173, Percent_Identity=24.2774566473988, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI186700629, Length=173, Percent_Identity=24.2774566473988, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI186972120, Length=173, Percent_Identity=24.2774566473988, Blast_Score=66, Evalue=1e-11, Organism=Homo sapiens, GI111154074, Length=176, Percent_Identity=26.7045454545455, Blast_Score=65, Evalue=4e-11, Organism=Homo sapiens, GI21361598, Length=181, Percent_Identity=24.3093922651934, Blast_Score=65, Evalue=4e-11, Organism=Escherichia coli, GI1790080, Length=183, Percent_Identity=40.9836065573771, Blast_Score=145, Evalue=2e-36, Organism=Caenorhabditis elegans, GI193203132, Length=179, Percent_Identity=37.9888268156425, Blast_Score=130, Evalue=5e-31, Organism=Caenorhabditis elegans, GI17508835, Length=179, Percent_Identity=37.9888268156425, Blast_Score=129, Evalue=7e-31, Organism=Caenorhabditis elegans, GI71988041, Length=176, Percent_Identity=24.4318181818182, Blast_Score=68, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71988048, Length=176, Percent_Identity=24.4318181818182, Blast_Score=68, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6320662, Length=183, Percent_Identity=41.5300546448087, Blast_Score=134, Evalue=8e-33, Organism=Drosophila melanogaster, GI21356141, Length=168, Percent_Identity=38.0952380952381, Blast_Score=114, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 [H]
Pfam domain/function: PF00625 Guanylate_kin [H]
EC number: =2.7.4.8 [H]
Molecular weight: Translated: 21116; Mature: 21116
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS00856 GUANYLATE_KINASE_1 ; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAVPNLYIISSVAGGGKSTIIQALLKENPEFYFSISCTTRDPRPGDEEGKTYYFLTIPE CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCEEEEEECHH FQKKIADGEFYEWAEVHGNYYGTPKAPILDAIKEHRVALMDLDVQGAKSVKQLRPESVTI HHHHHCCCCCEEHHHHCCCCCCCCCCHHHHHHHHCCEEEEEECCCCHHHHHHCCCCEEEE FIEPPSREIWIERLIRRGTDSKTSIEKRIENGIIELDEAPSFDYVVINDRLEDAITEVKA EEECCCHHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCCCCCCEEEECCHHHHHHHHHHH ILCGTKS HHCCCCC >Mature Secondary Structure MKAVPNLYIISSVAGGGKSTIIQALLKENPEFYFSISCTTRDPRPGDEEGKTYYFLTIPE CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCEEEEEECHH FQKKIADGEFYEWAEVHGNYYGTPKAPILDAIKEHRVALMDLDVQGAKSVKQLRPESVTI HHHHHCCCCCEEHHHHCCCCCCCCCCHHHHHHHHCCEEEEEECCCCHHHHHHCCCCEEEE FIEPPSREIWIERLIRRGTDSKTSIEKRIENGIIELDEAPSFDYVVINDRLEDAITEVKA EEECCCHHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCCCCCCEEEECCHHHHHHHHHHH ILCGTKS HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA