Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
---|---|
Accession | NC_010602 |
Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183220329
Identifier: 183220329
GI number: 183220329
Start: 957845
End: 958189
Strand: Direct
Name: 183220329
Synonym: LEPBI_I0925
Alternate gene names: NA
Gene position: 957845-958189 (Clockwise)
Preceding gene: 183220318
Following gene: 183220330
Centisome position: 26.61
GC content: 37.68
Gene sequence:
>345_bases ATGAAAGGATTTGTTGGTCTATGCTTTTTTTTACCAGGAATCATTTTCGCTGAAATAAATCCGTGGAACTTGAGACCAGA TGTAAGGATCCTAACGAGAAAAGAAGTTTCGCATATTGTTTTAGAAAAACGAAACGATCACTTTCGTGTGACTCTGATTG TATCAGAACGTTTTCCCTACAATTATAAGGCTTTATCCCATCCCTTTTTTTTCCGAATGGAAGATGAGAAAAAAGCGATG GAACTTGCGAATCAAATGGACAAGTTTTTGGACACAGGAAAAAGTTTCACCATCACCTTGAATGGATCTGAAATCCAAAC TTTGGTATGGGGAGAACCCGATTGA
Upstream 100 bases:
>100_bases TTCGGGTATGTTGAACTCTTTTGGTGAACATCCCCAAAAAACGAGGGCCGTAATCGATATCATGTAAGGAATTGATTTCA TTTGCCGATGGTATTTCTAT
Downstream 100 bases:
>100_bases CTCGTTCGTTTTATATTTATTTTAAAGAGATTTTTCACAAACCAACCAGACAAGAATGGGATATTTTAAAACTGGCAGAA CCACGTTTTGAAAAAGAATA
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MKGFVGLCFFLPGIIFAEINPWNLRPDVRILTRKEVSHIVLEKRNDHFRVTLIVSERFPYNYKALSHPFFFRMEDEKKAM ELANQMDKFLDTGKSFTITLNGSEIQTLVWGEPD
Sequences:
>Translated_114_residues MKGFVGLCFFLPGIIFAEINPWNLRPDVRILTRKEVSHIVLEKRNDHFRVTLIVSERFPYNYKALSHPFFFRMEDEKKAM ELANQMDKFLDTGKSFTITLNGSEIQTLVWGEPD >Mature_114_residues MKGFVGLCFFLPGIIFAEINPWNLRPDVRILTRKEVSHIVLEKRNDHFRVTLIVSERFPYNYKALSHPFFFRMEDEKKAM ELANQMDKFLDTGKSFTITLNGSEIQTLVWGEPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13383; Mature: 13383
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGFVGLCFFLPGIIFAEINPWNLRPDVRILTRKEVSHIVLEKRNDHFRVTLIVSERFPY CCCHHHHHHHHCCEEEEECCCCCCCCCEEEEEHHHHHEEEEECCCCEEEEEEEEECCCCC NYKALSHPFFFRMEDEKKAMELANQMDKFLDTGKSFTITLNGSEIQTLVWGEPD CCEECCCCEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEECCCC >Mature Secondary Structure MKGFVGLCFFLPGIIFAEINPWNLRPDVRILTRKEVSHIVLEKRNDHFRVTLIVSERFPY CCCHHHHHHHHCCEEEEECCCCCCCCCEEEEEHHHHHEEEEECCCCEEEEEEEEECCCCC NYKALSHPFFFRMEDEKKAMELANQMDKFLDTGKSFTITLNGSEIQTLVWGEPD CCEECCCCEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA