| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220327
Identifier: 183220327
GI number: 183220327
Start: 955506
End: 956696
Strand: Reverse
Name: 183220327
Synonym: LEPBI_I0923
Alternate gene names: NA
Gene position: 956696-955506 (Counterclockwise)
Preceding gene: 183220328
Following gene: 183220326
Centisome position: 26.58
GC content: 42.15
Gene sequence:
>1191_bases GTGTCGGATTTTATATGGCGTGGGAATTCTTTTACAGGGGAAGGGCAAAATAGAAGGGATGGAGCTTCCTACCAAAGTTT TACCTATGCCCCAGCCTTGCAACCTACGATCAATATCTGGTCTCCTGACAAAAAATTTGAATGGATGGTCTTTGGGAATT TCCAATTGATGAACCGTGCTGACAAGGATTCGGACAAACGACTGATCCAAACAAGCCCTGGTGGTGTTGGACCTTCTTAC TTAGGAGAAGACCCTCGTTTTTTTGATCCTTACAACCAAGACCCTTGCGTACAATCTGTTCACAACCAATTGGTTTCGGG CGAAACAACCAATGTTTCCTGCCAAGGATTCATTCCGAACCGTGGGTATGGGCCCAAAAAAGAGCCAAATGGCAACAAAA GAGCGGATGGAATGTTTTTTTCCATGAGTTATCATTTTGATCCCAGCGTCTTTGGTGATTTCAGCGTTGGAATTTGGTTT TATAATACCTTTCAAAAAACCCCAGGATCTCTCCTATCCCCTTCCACACAAAAACTAAACCCTGTTGTTTCCGGTGGTGC CGCGAATGGCTTTCACGCCAACAATCCAGATGCCCAAACAAGGTTATCTTGGCATGAATACTTTTTGCAATGGAAGTTAC CTTTCCTTCGGGTGATCAAACCCACTTTTGCTTATTACACTCAGTACTCGACAGAGAATGGTGGGCACATGGCAGGGAAA AATTATCTTTCCATCAGTGCCAATTATACCTTCTTTGAAGGGGATTTTTTCCGCATCCAACCCCATTGGAATTTGGGGTA TACCATGAGTAATAATGCGATCGACAATCGGAATGGAATACAAGACATAACTACATCCCTTTCGTTTTTCTTCGGAGATT TTTTCTTAAAAGGAGCACACATCCTACGACCGAATTCCTATCTCTATGATACCAATAATTATTTTGGGTATGCAGGTGGT GATCCCGACAAAGCCAACTGGAACAGAACTTCAGATGATGGGAAGGTAGTGAATCCTTCTCGGATTTATGGTGCGTACAA CACCGCAATCTTAAATTCGATTGAGCAAGTAAGCACAGGGAATTCACTAACTGATGCCACAATCAAAACCTATCTGCGTG AATCTTATACTTTGCAAAAGATTCCAATCCATTTATTTTATGTTAGCTTTGGGTATTCAAAATCGTTCTAA
Upstream 100 bases:
>100_bases ACTGTTTCTCTCTTTAATTCTGTTATTACCGTTTCAGATCCAATCAGAAACAAAGCCGGAAGATTCCAAATCCATCACAA TTGAAACCAATACCGAAATT
Downstream 100 bases:
>100_bases ACCTATTATTTATTATTTTATACTAGAATATTAGGAAAGGCTTGACTACCTAGAAATTCAAATCATACTTTGCCCCACCT CTTGGGGACCTATTATGAAA
Product: putative signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MSDFIWRGNSFTGEGQNRRDGASYQSFTYAPALQPTINIWSPDKKFEWMVFGNFQLMNRADKDSDKRLIQTSPGGVGPSY LGEDPRFFDPYNQDPCVQSVHNQLVSGETTNVSCQGFIPNRGYGPKKEPNGNKRADGMFFSMSYHFDPSVFGDFSVGIWF YNTFQKTPGSLLSPSTQKLNPVVSGGAANGFHANNPDAQTRLSWHEYFLQWKLPFLRVIKPTFAYYTQYSTENGGHMAGK NYLSISANYTFFEGDFFRIQPHWNLGYTMSNNAIDNRNGIQDITTSLSFFFGDFFLKGAHILRPNSYLYDTNNYFGYAGG DPDKANWNRTSDDGKVVNPSRIYGAYNTAILNSIEQVSTGNSLTDATIKTYLRESYTLQKIPIHLFYVSFGYSKSF
Sequences:
>Translated_396_residues MSDFIWRGNSFTGEGQNRRDGASYQSFTYAPALQPTINIWSPDKKFEWMVFGNFQLMNRADKDSDKRLIQTSPGGVGPSY LGEDPRFFDPYNQDPCVQSVHNQLVSGETTNVSCQGFIPNRGYGPKKEPNGNKRADGMFFSMSYHFDPSVFGDFSVGIWF YNTFQKTPGSLLSPSTQKLNPVVSGGAANGFHANNPDAQTRLSWHEYFLQWKLPFLRVIKPTFAYYTQYSTENGGHMAGK NYLSISANYTFFEGDFFRIQPHWNLGYTMSNNAIDNRNGIQDITTSLSFFFGDFFLKGAHILRPNSYLYDTNNYFGYAGG DPDKANWNRTSDDGKVVNPSRIYGAYNTAILNSIEQVSTGNSLTDATIKTYLRESYTLQKIPIHLFYVSFGYSKSF >Mature_395_residues SDFIWRGNSFTGEGQNRRDGASYQSFTYAPALQPTINIWSPDKKFEWMVFGNFQLMNRADKDSDKRLIQTSPGGVGPSYL GEDPRFFDPYNQDPCVQSVHNQLVSGETTNVSCQGFIPNRGYGPKKEPNGNKRADGMFFSMSYHFDPSVFGDFSVGIWFY NTFQKTPGSLLSPSTQKLNPVVSGGAANGFHANNPDAQTRLSWHEYFLQWKLPFLRVIKPTFAYYTQYSTENGGHMAGKN YLSISANYTFFEGDFFRIQPHWNLGYTMSNNAIDNRNGIQDITTSLSFFFGDFFLKGAHILRPNSYLYDTNNYFGYAGGD PDKANWNRTSDDGKVVNPSRIYGAYNTAILNSIEQVSTGNSLTDATIKTYLRESYTLQKIPIHLFYVSFGYSKSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44859; Mature: 44728
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDFIWRGNSFTGEGQNRRDGASYQSFTYAPALQPTINIWSPDKKFEWMVFGNFQLMNRA CCCCEECCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCEEEEEEECCCEECCC DKDSDKRLIQTSPGGVGPSYLGEDPRFFDPYNQDPCVQSVHNQLVSGETTNVSCQGFIPN CCCCCCEEEEECCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCC RGYGPKKEPNGNKRADGMFFSMSYHFDPSVFGDFSVGIWFYNTFQKTPGSLLSPSTQKLN CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEHHCCCCCCCCCCHHHCC PVVSGGAANGFHANNPDAQTRLSWHEYFLQWKLPFLRVIKPTFAYYTQYSTENGGHMAGK CEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCCCCCEECCC NYLSISANYTFFEGDFFRIQPHWNLGYTMSNNAIDNRNGIQDITTSLSFFFGDFFLKGAH CEEEEECCEEEEECCEEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCEE ILRPNSYLYDTNNYFGYAGGDPDKANWNRTSDDGKVVNPSRIYGAYNTAILNSIEQVSTG EECCCCEEEECCCEEEECCCCCCCCCCCCCCCCCEEECCHHEECCHHHHHHHHHHHHCCC NSLTDATIKTYLRESYTLQKIPIHLFYVSFGYSKSF CCHHHHHHHHHHHHCCCEEECCEEEEEEEECCCCCC >Mature Secondary Structure SDFIWRGNSFTGEGQNRRDGASYQSFTYAPALQPTINIWSPDKKFEWMVFGNFQLMNRA CCCEECCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCEEEEEEECCCEECCC DKDSDKRLIQTSPGGVGPSYLGEDPRFFDPYNQDPCVQSVHNQLVSGETTNVSCQGFIPN CCCCCCEEEEECCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCC RGYGPKKEPNGNKRADGMFFSMSYHFDPSVFGDFSVGIWFYNTFQKTPGSLLSPSTQKLN CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEHHCCCCCCCCCCHHHCC PVVSGGAANGFHANNPDAQTRLSWHEYFLQWKLPFLRVIKPTFAYYTQYSTENGGHMAGK CEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCCCCCEECCC NYLSISANYTFFEGDFFRIQPHWNLGYTMSNNAIDNRNGIQDITTSLSFFFGDFFLKGAH CEEEEECCEEEEECCEEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCEE ILRPNSYLYDTNNYFGYAGGDPDKANWNRTSDDGKVVNPSRIYGAYNTAILNSIEQVSTG EECCCCEEEECCCEEEECCCCCCCCCCCCCCCCCEEECCHHEECCHHHHHHHHHHHHCCC NSLTDATIKTYLRESYTLQKIPIHLFYVSFGYSKSF CCHHHHHHHHHHHHCCCEEECCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA