| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220328
Identifier: 183220328
GI number: 183220328
Start: 956803
End: 957825
Strand: Reverse
Name: 183220328
Synonym: LEPBI_I0924
Alternate gene names: NA
Gene position: 957825-956803 (Counterclockwise)
Preceding gene: 183220337
Following gene: 183220327
Centisome position: 26.61
GC content: 39.3
Gene sequence:
>1023_bases ATGAAATCAATTCCTTACATGATATCGATTACGGCCCTCGTTTTTTGGGGATGTTCACCAAAAGAGTTCAACATACCCGA AAACCCCTATGCCGTATGGGCCAAAGAGAGCCCTGGATTACAAATGGATTCATTACCAAACCCGACTGGGAACTGGAACG ATCGTATTTATCCTCTTGATTCCAAAAGACTTCTCACTCTCAAAGAAATCAATGAAATCGATGGCATTGGAGATATCCCA ACAGGAACAAAAGACTTACAATTTTGGAGACAACATTTAATCCCAATACAATCTGTTTTTCCTAAAGAGGTCAACCATTT GGCAAACCAATTGATTTATGGGATTTATTTTGTAACAAACTTAGGTTCCACGGGACTAACAGGAGTCATACGAGATAAAT CAGGAAAACCGATGGGCGGTATCATTTATTTGGACTCCGATTTATTGAAAGATGGTGGGAATGACTGGGCAACAAAGCGC GAAAACACATCTTTCCAACAGGATCCTTCCTATTCCATTCAAGTCCAATTGGACAATACCAATTCACTAGATACAGCTTT ATCATTTATCATCTTACACGAATTAGGTCACATTTTAGCAATTGTCCATGGGTATGCGCCTGATTATTCGGAACCAAAAC GTGATTTTCGAAATTATCCTTACTTCAAAGGGGTTTGGTGGTCAGAAACGTTTTCCCCTTACGAAGATACTTTCTTCCCA GAAAGGTCCAAAATCAAGTTTTATCAAAAAAATCCGACAACTCCTGTTTTCCCTGATGGGAAGTTCATCTATAAAAAACT GACAAACACTCAGTTTGTCTCCCTCTACGCGGCCACTAACGCTGATGATACCTTTGCGGAAGCATTTGTCCAATACGTCC ACGTGTATTCACTCAAAAAAGAATACAAAGTCCTCCTCAATTTTGGAAATGAATCTGAAGTTTTGCTTTCGAATCCAATT GCAAAAGAAGGAGGGCGTAAATTTCGTGAGTTATTCGAATCCATTTTTGCGAAGTCTCTATAA
Upstream 100 bases:
>100_bases ATCTGGTCTCAAGTTCCACGGATTTATTTCAGCGAAAATGATTCCTGGTAAAAAAAAGCATAGACCAACAAATCCTTTCA TATAGAAATACCATCGGCAA
Downstream 100 bases:
>100_bases GTATTTACTGTTTCTCTCTTTAATTCTGTTATTACCGTTTCAGATCCAATCAGAAACAAAGCCGGAAGATTCCAAATCCA TCACAATTGAAACCAATACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MKSIPYMISITALVFWGCSPKEFNIPENPYAVWAKESPGLQMDSLPNPTGNWNDRIYPLDSKRLLTLKEINEIDGIGDIP TGTKDLQFWRQHLIPIQSVFPKEVNHLANQLIYGIYFVTNLGSTGLTGVIRDKSGKPMGGIIYLDSDLLKDGGNDWATKR ENTSFQQDPSYSIQVQLDNTNSLDTALSFIILHELGHILAIVHGYAPDYSEPKRDFRNYPYFKGVWWSETFSPYEDTFFP ERSKIKFYQKNPTTPVFPDGKFIYKKLTNTQFVSLYAATNADDTFAEAFVQYVHVYSLKKEYKVLLNFGNESEVLLSNPI AKEGGRKFRELFESIFAKSL
Sequences:
>Translated_340_residues MKSIPYMISITALVFWGCSPKEFNIPENPYAVWAKESPGLQMDSLPNPTGNWNDRIYPLDSKRLLTLKEINEIDGIGDIP TGTKDLQFWRQHLIPIQSVFPKEVNHLANQLIYGIYFVTNLGSTGLTGVIRDKSGKPMGGIIYLDSDLLKDGGNDWATKR ENTSFQQDPSYSIQVQLDNTNSLDTALSFIILHELGHILAIVHGYAPDYSEPKRDFRNYPYFKGVWWSETFSPYEDTFFP ERSKIKFYQKNPTTPVFPDGKFIYKKLTNTQFVSLYAATNADDTFAEAFVQYVHVYSLKKEYKVLLNFGNESEVLLSNPI AKEGGRKFRELFESIFAKSL >Mature_340_residues MKSIPYMISITALVFWGCSPKEFNIPENPYAVWAKESPGLQMDSLPNPTGNWNDRIYPLDSKRLLTLKEINEIDGIGDIP TGTKDLQFWRQHLIPIQSVFPKEVNHLANQLIYGIYFVTNLGSTGLTGVIRDKSGKPMGGIIYLDSDLLKDGGNDWATKR ENTSFQQDPSYSIQVQLDNTNSLDTALSFIILHELGHILAIVHGYAPDYSEPKRDFRNYPYFKGVWWSETFSPYEDTFFP ERSKIKFYQKNPTTPVFPDGKFIYKKLTNTQFVSLYAATNADDTFAEAFVQYVHVYSLKKEYKVLLNFGNESEVLLSNPI AKEGGRKFRELFESIFAKSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38868; Mature: 38868
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSIPYMISITALVFWGCSPKEFNIPENPYAVWAKESPGLQMDSLPNPTGNWNDRIYPLD CCCCCHHHEEEEHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECC SKRLLTLKEINEIDGIGDIPTGTKDLQFWRQHLIPIQSVFPKEVNHLANQLIYGIYFVTN CCCEEHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHEEC LGSTGLTGVIRDKSGKPMGGIIYLDSDLLKDGGNDWATKRENTSFQQDPSYSIQVQLDNT CCCCCCEEEEECCCCCCCCEEEEECHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCC NSLDTALSFIILHELGHILAIVHGYAPDYSEPKRDFRNYPYFKGVWWSETFSPYEDTFFP CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCEECCCCCCCCCHHCCCC ERSKIKFYQKNPTTPVFPDGKFIYKKLTNTQFVSLYAATNADDTFAEAFVQYVHVYSLKK CCCCEEEEECCCCCCCCCCCHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHH EYKVLLNFGNESEVLLSNPIAKEGGRKFRELFESIFAKSL HEEEEEECCCCCCEEEECCCHHHCCHHHHHHHHHHHHCCC >Mature Secondary Structure MKSIPYMISITALVFWGCSPKEFNIPENPYAVWAKESPGLQMDSLPNPTGNWNDRIYPLD CCCCCHHHEEEEHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECC SKRLLTLKEINEIDGIGDIPTGTKDLQFWRQHLIPIQSVFPKEVNHLANQLIYGIYFVTN CCCEEHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHEEC LGSTGLTGVIRDKSGKPMGGIIYLDSDLLKDGGNDWATKRENTSFQQDPSYSIQVQLDNT CCCCCCEEEEECCCCCCCCEEEEECHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCC NSLDTALSFIILHELGHILAIVHGYAPDYSEPKRDFRNYPYFKGVWWSETFSPYEDTFFP CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCEECCCCCCCCCHHCCCC ERSKIKFYQKNPTTPVFPDGKFIYKKLTNTQFVSLYAATNADDTFAEAFVQYVHVYSLKK CCCCEEEEECCCCCCCCCCCHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHH EYKVLLNFGNESEVLLSNPIAKEGGRKFRELFESIFAKSL HEEEEEECCCCCCEEEECCCHHHCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA