| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220322
Identifier: 183220322
GI number: 183220322
Start: 948922
End: 950178
Strand: Reverse
Name: 183220322
Synonym: LEPBI_I0918
Alternate gene names: NA
Gene position: 950178-948922 (Counterclockwise)
Preceding gene: 183220323
Following gene: 183220321
Centisome position: 26.4
GC content: 31.5
Gene sequence:
>1257_bases ATGATTCCTCATAGCCTTGTATTAAGTTCACAAACAACGGATCAATTAATCCATATTTTAAACGAGATCCATTTTACCTA CGAACGTTTCGAAAATTTAAGTGATGTTATGCTTCAATTAAAAAATCAGAAATTCCATTTTTTGATTTTATCCATCGAGG ACCTCAATGATCTAAATTCACAGGAAATTTTAGAAAACATCACCAAATCTTTTCCGAATACACTTATTATTTTGATCACC AATACAAACCATTGGGCACAGACTGCTTCCCTACTCAAACGACACTCAGCTTATGACTATTTGCAAACACCTCTCGAGGT TGAACATGTTAAGTTTACTCTCGACAGATCATTTCAATATTTAAACACAAAATTAAAATCTCAATTCATTCACGAAGCGG AAAACCATCTTTTCAAACGAGTTATCGAAATATTCGATTGGAAAAAATCACTCATACATAAAGAAAATCAAAACATATCT GCAGACATCATCCACCAAATGAATATTAGTTTATTTCAAGGGAGCGGGATTGGAACTTTGATGAGTGTGGTGAGCATACT AATATCAAAAAGTAAACTTGATACCGAAAACAACCACTATATTGTCCAAAAACCAATTTTAGATTTGTTATCGGAAAACT ATGAAGCCGCAAAAAGTATGTTTGACAGTATGTCTATTTCTCAGTCGGTAATTGACGATGACTTATTGGTTGAAAATACG GAATCACCGAACCAACTTGTACCCATCTTTGAAACTGAAATTAAATATTTAGAAGAAGCCTTGGTTATCAAATCACAAAA AATCAATATAAGCCAAATTCCAAATTCAGTTATGAATTATAAAATTCGATTCAATCCTGAAAAAATCACATACATTGTTC GCGAAATACTTTTGAATGCAATTAAATATTCCAAGGAAGGAGATGAAATTTTTATCATTTATTTCCATAGGGAAAATTTT TTAGAAATTAAAGTCATCAATCCTGCCTATCAAAATGAAGACGGAACCATTGGTATCCCTGAAAAATACGAATCGTTTAT ATTCGAACCATTTTTTAGAATCTCCTCTGTTGTAGATGACAGTTACGCAAAATTTGAACAGTTCAGATTTGGACTTGGTT TGACTTTAGTTAAAAAGATCATGGACCAACACCAAGCAAATATTCAAATCTATAACATTGATGATAATTTAAGAAATGAT AACACAAAAGATGTATGTTTAACAATGCGATTTCCATTATTACAAGAGGAGAAATAA
Upstream 100 bases:
>100_bases TTGTTTATGGTATGCCAAAAGTTGCATTTGAAATAGGTGCTGTGATGTACCAACTTCCTTTGGAATCCATTGCAGATAAA ACAAGAGAGATCGGTTCCAA
Downstream 100 bases:
>100_bases AATGGCAAAAATATTAACAGTTGATGATGCACCAGCCGTGCTTAAAATCCTAAACCTAGTATTAACGACTGATGGGCATG AGGTTGAATCTGCATCCAAT
Product: chemotactic two-component histidine kinase
Products: NA
Alternate protein names: Chemotactic Two-Component Histidine Kinase; Two-Component Signal Transduction System; Histidine Kinase/Response Regulator Hybrid Protein
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MIPHSLVLSSQTTDQLIHILNEIHFTYERFENLSDVMLQLKNQKFHFLILSIEDLNDLNSQEILENITKSFPNTLIILIT NTNHWAQTASLLKRHSAYDYLQTPLEVEHVKFTLDRSFQYLNTKLKSQFIHEAENHLFKRVIEIFDWKKSLIHKENQNIS ADIIHQMNISLFQGSGIGTLMSVVSILISKSKLDTENNHYIVQKPILDLLSENYEAAKSMFDSMSISQSVIDDDLLVENT ESPNQLVPIFETEIKYLEEALVIKSQKINISQIPNSVMNYKIRFNPEKITYIVREILLNAIKYSKEGDEIFIIYFHRENF LEIKVINPAYQNEDGTIGIPEKYESFIFEPFFRISSVVDDSYAKFEQFRFGLGLTLVKKIMDQHQANIQIYNIDDNLRND NTKDVCLTMRFPLLQEEK
Sequences:
>Translated_418_residues MIPHSLVLSSQTTDQLIHILNEIHFTYERFENLSDVMLQLKNQKFHFLILSIEDLNDLNSQEILENITKSFPNTLIILIT NTNHWAQTASLLKRHSAYDYLQTPLEVEHVKFTLDRSFQYLNTKLKSQFIHEAENHLFKRVIEIFDWKKSLIHKENQNIS ADIIHQMNISLFQGSGIGTLMSVVSILISKSKLDTENNHYIVQKPILDLLSENYEAAKSMFDSMSISQSVIDDDLLVENT ESPNQLVPIFETEIKYLEEALVIKSQKINISQIPNSVMNYKIRFNPEKITYIVREILLNAIKYSKEGDEIFIIYFHRENF LEIKVINPAYQNEDGTIGIPEKYESFIFEPFFRISSVVDDSYAKFEQFRFGLGLTLVKKIMDQHQANIQIYNIDDNLRND NTKDVCLTMRFPLLQEEK >Mature_418_residues MIPHSLVLSSQTTDQLIHILNEIHFTYERFENLSDVMLQLKNQKFHFLILSIEDLNDLNSQEILENITKSFPNTLIILIT NTNHWAQTASLLKRHSAYDYLQTPLEVEHVKFTLDRSFQYLNTKLKSQFIHEAENHLFKRVIEIFDWKKSLIHKENQNIS ADIIHQMNISLFQGSGIGTLMSVVSILISKSKLDTENNHYIVQKPILDLLSENYEAAKSMFDSMSISQSVIDDDLLVENT ESPNQLVPIFETEIKYLEEALVIKSQKINISQIPNSVMNYKIRFNPEKITYIVREILLNAIKYSKEGDEIFIIYFHRENF LEIKVINPAYQNEDGTIGIPEKYESFIFEPFFRISSVVDDSYAKFEQFRFGLGLTLVKKIMDQHQANIQIYNIDDNLRND NTKDVCLTMRFPLLQEEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48884; Mature: 48884
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPHSLVLSSQTTDQLIHILNEIHFTYERFENLSDVMLQLKNQKFHFLILSIEDLNDLNS CCCCHHEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEEECCCCCCCH QEILENITKSFPNTLIILITNTNHWAQTASLLKRHSAYDYLQTPLEVEHVKFTLDRSFQY HHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEHEEEEHHHHHHH LNTKLKSQFIHEAENHLFKRVIEIFDWKKSLIHKENQNISADIIHQMNISLFQGSGIGTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCEEEEECCCHHHH MSVVSILISKSKLDTENNHYIVQKPILDLLSENYEAAKSMFDSMSISQSVIDDDLLVENT HHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEECC ESPNQLVPIFETEIKYLEEALVIKSQKINISQIPNSVMNYKIRFNPEKITYIVREILLNA CCCCCEECHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHEEEEEECHHHHHHHHHHHHHHH IKYSKEGDEIFIIYFHRENFLEIKVINPAYQNEDGTIGIPEKYESFIFEPFFRISSVVDD HHCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH SYAKFEQFRFGLGLTLVKKIMDQHQANIQIYNIDDNLRNDNTKDVCLTMRFPLLQEEK HHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure MIPHSLVLSSQTTDQLIHILNEIHFTYERFENLSDVMLQLKNQKFHFLILSIEDLNDLNS CCCCHHEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEEECCCCCCCH QEILENITKSFPNTLIILITNTNHWAQTASLLKRHSAYDYLQTPLEVEHVKFTLDRSFQY HHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEHEEEEHHHHHHH LNTKLKSQFIHEAENHLFKRVIEIFDWKKSLIHKENQNISADIIHQMNISLFQGSGIGTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCEEEEECCCHHHH MSVVSILISKSKLDTENNHYIVQKPILDLLSENYEAAKSMFDSMSISQSVIDDDLLVENT HHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEECC ESPNQLVPIFETEIKYLEEALVIKSQKINISQIPNSVMNYKIRFNPEKITYIVREILLNA CCCCCEECHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHEEEEEECHHHHHHHHHHHHHHH IKYSKEGDEIFIIYFHRENFLEIKVINPAYQNEDGTIGIPEKYESFIFEPFFRISSVVDD HHCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH SYAKFEQFRFGLGLTLVKKIMDQHQANIQIYNIDDNLRNDNTKDVCLTMRFPLLQEEK HHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA