| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220298
Identifier: 183220298
GI number: 183220298
Start: 914678
End: 915142
Strand: Reverse
Name: 183220298
Synonym: LEPBI_I0893
Alternate gene names: NA
Gene position: 915142-914678 (Counterclockwise)
Preceding gene: 183220299
Following gene: 183220295
Centisome position: 25.42
GC content: 41.29
Gene sequence:
>465_bases ATGTCGGAATTGGCAGAACCACTTGTACAGACAGAAAGATTTTCGGTCATGGGTCTTCGCGTCAGGACTTCGAATGCACC TGGTGATGCTGATGTGAAAATCCCCGCCATTTATTCTCAGTTTTATCGACAAGATATCCCCAAACAAATGGAATCCCTGC GTAAATTTGATCCTTTGTTTGGAGTTTATTTTGCTTATGAATCAGATGAGAATGGAGCGTATGACTTTTTGTTAGGTTAT GCAGTGGAACCAAATGCAAAGCCTCTATCTGGTATGGAAATCATTCATATTGAACCACAAAACGGACGTTATTTTGCAAT CCAACCTGGTCCACCAGAAGAAGTGGTACCCAAATTCTGGGCTGAGATTTGGAACCATCCAGAAATTCCAAAGATCAGAA CCTTTCAAACCGATTGGGAAGAATATTCGGAAGCTGGGATTCGGGTTTTTTTATCTACAAAGTAG
Upstream 100 bases:
>100_bases ATCACCAGGAGTAATTACCATGTGTACAGGAGGATGCGGGAAGTCAAACCAATATTGAAGAAAAGATTGCGTTTTTTTGT GAAACTGAGAGGATTTCAAT
Downstream 100 bases:
>100_bases TAATCGTGTCATTCTCCCCTATTTTTTTCACTTCGCAAAATGCGTTTTCATGATTCTTTTCCTTTCGATAATAGGATTAC AATTCCTGAATTTAAATCCC
Product: putative regulatory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSELAEPLVQTERFSVMGLRVRTSNAPGDADVKIPAIYSQFYRQDIPKQMESLRKFDPLFGVYFAYESDENGAYDFLLGY AVEPNAKPLSGMEIIHIEPQNGRYFAIQPGPPEEVVPKFWAEIWNHPEIPKIRTFQTDWEEYSEAGIRVFLSTK
Sequences:
>Translated_154_residues MSELAEPLVQTERFSVMGLRVRTSNAPGDADVKIPAIYSQFYRQDIPKQMESLRKFDPLFGVYFAYESDENGAYDFLLGY AVEPNAKPLSGMEIIHIEPQNGRYFAIQPGPPEEVVPKFWAEIWNHPEIPKIRTFQTDWEEYSEAGIRVFLSTK >Mature_153_residues SELAEPLVQTERFSVMGLRVRTSNAPGDADVKIPAIYSQFYRQDIPKQMESLRKFDPLFGVYFAYESDENGAYDFLLGYA VEPNAKPLSGMEIIHIEPQNGRYFAIQPGPPEEVVPKFWAEIWNHPEIPKIRTFQTDWEEYSEAGIRVFLSTK
Specific function: Unknown
COG id: COG3708
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17738; Mature: 17607
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELAEPLVQTERFSVMGLRVRTSNAPGDADVKIPAIYSQFYRQDIPKQMESLRKFDPLF CCHHHHHHHHHCCEEEEEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCE GVYFAYESDENGAYDFLLGYAVEPNAKPLSGMEIIHIEPQNGRYFAIQPGPPEEVVPKFW EEEEEEECCCCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCEEEECCCCCHHHHHHHH AEIWNHPEIPKIRTFQTDWEEYSEAGIRVFLSTK HHHCCCCCCCCEEEECCCHHHHHCCCEEEEEECC >Mature Secondary Structure SELAEPLVQTERFSVMGLRVRTSNAPGDADVKIPAIYSQFYRQDIPKQMESLRKFDPLF CHHHHHHHHHCCEEEEEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCE GVYFAYESDENGAYDFLLGYAVEPNAKPLSGMEIIHIEPQNGRYFAIQPGPPEEVVPKFW EEEEEEECCCCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCEEEECCCCCHHHHHHHH AEIWNHPEIPKIRTFQTDWEEYSEAGIRVFLSTK HHHCCCCCCCCEEEECCCHHHHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA