| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is feoB
Identifier: 183220284
GI number: 183220284
Start: 897388
End: 899460
Strand: Reverse
Name: feoB
Synonym: LEPBI_I0879
Alternate gene names: 183220284
Gene position: 899460-897388 (Counterclockwise)
Preceding gene: 183220285
Following gene: 183220283
Centisome position: 24.99
GC content: 38.74
Gene sequence:
>2073_bases ATGAAAGAAAAAAATATCTACCTAGTCGGAAATCCAAATTGTGGGAAAACCACTTTATTCAACCAACTCACAGGCCTAAA TCAAAAAACGGGGAACTTCAGTGGAGTCACTGTAGAAAAAAAAGAAGGGGTTGTTTATTTACCCAATTTGGAATTAAAGA TCACCGACTTACCCGGAACATACGGTCTAGGTGGAATTGCCGAAGATAAAAAGATCGCCTACGAAGTTTTACTCAAACGA AAGGAAAATGAAGTAGTGATTTATGTATTGGATGCTCTCAACCTAGAGAGAGGTCTCCAATTTTTATTACAAATCATCGA CATGGGTGTGCCCACTCTTGTTGTCCTCACGATGAAGGATGTCCTCGAAAAAAAAAGAATCCAATTGGATTTGAAAAAAT TAAAACATTCCCTTGGACTAGAAATTGTTCTTGTAAATGCAAAGTCAGGTGAAGGGATCTCTGAACTTAAAACATTATTA TCCAAAGAAGAATCGTATCGAAAACAAAAACGGTTATGGACATGGGGATCCAAAGAAGAATCCTTTTTAACTTCCCTAAA ACAAAAACTCAAAATTACAACCAATGAAGCGGAGTTTTTTCTTTCGCAGGCACTTAAATTTTTAAATCATGACCCACACT TACAGGACAGTCGCTACCTAAACCAATTCCCTAACGAAACCAAACAATTTTTAACCAAAGAATTGGAATCAAAACCCTTA CAGTTTGCATACCAAGAAGAGATGATCCACAGATCCATCTTGATCAAAAAAATCATCTCTGAGACGATTCATTATCCAAT TGCAATACAAGGGAGTTGGGAAGAACGATTGGACCGTATCTTTTTACATCCCATTTTAGGTTTTGTATGTTTTTTTCTAC TGATGGGATTACTCTTCCAAAGTCTTTTTAGTTTTGCTGAAATTCCAATGGATTTGATTGAGGAAGGAATCACAGGTCTT CAAGAAACCATTGGGAACGTTTTATCCGATGGGCCATTGAAATCACTCCTCATAGAAGGGATATTAGGTGGAGTGGGAAG CGTTGTTGTTTTTGTTCCACAAATAGCATTACTTTTTTTGTTCATTGGGATTTTAGAAGAATCTGGTTATTTAGCAAGAG CAAGTTTTCTCATGGATCGTTTGATGGGGAAATTTGGACTTTCTGGAAAATCCTTTATCCCACTTCTTTCGTCAGCCGCC TGTGCGGTTCCTGCCATCCTTGGAACAAGGACCATTGAAAACAAATCGGATCGTTTTACAACGATTATGGTGTCACCACT CATCATGTGTTCGGCAAGATACCCTGTTTACATTTTGATTGTGGGAACTGTTTTTAGTTACCCACCAATATTTGGAATTT TCAATGTCCAAGGTTTTGTTTTGTTTTCCATGTTCTTTCTCGGAATGATAGTGAGTTTCACTTTTGCACTCATCTTTCGT AAGACTGTCTTCAAAGAAAATGCTTCTTATTTTGTGATGGAATTGCCTAGATACAACCTACCTTCCTTCAAAAGTTTATT TTTTACTGTCTACGGAAAAGTGAAATCATTTTTGGCGACGGCAGGTCAGATCATCCTTTATATCTCTGTGATTTTATGGT TTTTAAGCCACTTCCCCGCCGAATACAAAGACAATGTTTGGAAAACAAGCCCCATCGAAACTTCCTATATTGGACGTGTG GGAAAGGTAATGGAACCTGCCATCGAACCTCTTGGTTTTGATTGGAAAATTGGAATCTCCATTCTAACTTCGTTTGCAGC CAGGGAAGTGATGGTTTCCACCTTAGCAGTATTATACGGATCGGAAGAGGAAGGTGAGGAATCCGAATCCTTACGGGAAA CACTTCGGGCTGACAAAAAACCAGATGGATCCCCTGTTTGGACTCCACTCACAGGACTTTCCCTCCTCCTCTTTTTTGCC TTTGCTAGCCAATGTATGTCCACCCTTGCTGTGACAAAAAAGGAAACAGGGAGTTTGCTTTGGCCGACAGTCCAATTTTT GTACATGACAACACTTGCGATCTTTACCTCCTTTCTGGTATTCCAATTGGGAAAAATTTTAGGATTTGTTTAA
Upstream 100 bases:
>100_bases AATCCAAATACCTTGGTAAATTGATTTGTTTATTAGGGGGCACCACCATTGGTCTTCGAATGAAAGATGGAGAAGCGATT TTACTGAAAACCACCAAACA
Downstream 100 bases:
>100_bases TCTGCCGACAATGAAGTCTAGAGGCTCACTTTGGATTTTCATATTGGCAATAAAACTCTTACCAGAAACTCAGAACCATA TTTAGTAGCAGAGATTGGAC
Product: ferrous iron transport protein FeoB
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 690; Mature: 690
Protein sequence:
>690_residues MKEKNIYLVGNPNCGKTTLFNQLTGLNQKTGNFSGVTVEKKEGVVYLPNLELKITDLPGTYGLGGIAEDKKIAYEVLLKR KENEVVIYVLDALNLERGLQFLLQIIDMGVPTLVVLTMKDVLEKKRIQLDLKKLKHSLGLEIVLVNAKSGEGISELKTLL SKEESYRKQKRLWTWGSKEESFLTSLKQKLKITTNEAEFFLSQALKFLNHDPHLQDSRYLNQFPNETKQFLTKELESKPL QFAYQEEMIHRSILIKKIISETIHYPIAIQGSWEERLDRIFLHPILGFVCFFLLMGLLFQSLFSFAEIPMDLIEEGITGL QETIGNVLSDGPLKSLLIEGILGGVGSVVVFVPQIALLFLFIGILEESGYLARASFLMDRLMGKFGLSGKSFIPLLSSAA CAVPAILGTRTIENKSDRFTTIMVSPLIMCSARYPVYILIVGTVFSYPPIFGIFNVQGFVLFSMFFLGMIVSFTFALIFR KTVFKENASYFVMELPRYNLPSFKSLFFTVYGKVKSFLATAGQIILYISVILWFLSHFPAEYKDNVWKTSPIETSYIGRV GKVMEPAIEPLGFDWKIGISILTSFAAREVMVSTLAVLYGSEEEGEESESLRETLRADKKPDGSPVWTPLTGLSLLLFFA FASQCMSTLAVTKKETGSLLWPTVQFLYMTTLAIFTSFLVFQLGKILGFV
Sequences:
>Translated_690_residues MKEKNIYLVGNPNCGKTTLFNQLTGLNQKTGNFSGVTVEKKEGVVYLPNLELKITDLPGTYGLGGIAEDKKIAYEVLLKR KENEVVIYVLDALNLERGLQFLLQIIDMGVPTLVVLTMKDVLEKKRIQLDLKKLKHSLGLEIVLVNAKSGEGISELKTLL SKEESYRKQKRLWTWGSKEESFLTSLKQKLKITTNEAEFFLSQALKFLNHDPHLQDSRYLNQFPNETKQFLTKELESKPL QFAYQEEMIHRSILIKKIISETIHYPIAIQGSWEERLDRIFLHPILGFVCFFLLMGLLFQSLFSFAEIPMDLIEEGITGL QETIGNVLSDGPLKSLLIEGILGGVGSVVVFVPQIALLFLFIGILEESGYLARASFLMDRLMGKFGLSGKSFIPLLSSAA CAVPAILGTRTIENKSDRFTTIMVSPLIMCSARYPVYILIVGTVFSYPPIFGIFNVQGFVLFSMFFLGMIVSFTFALIFR KTVFKENASYFVMELPRYNLPSFKSLFFTVYGKVKSFLATAGQIILYISVILWFLSHFPAEYKDNVWKTSPIETSYIGRV GKVMEPAIEPLGFDWKIGISILTSFAAREVMVSTLAVLYGSEEEGEESESLRETLRADKKPDGSPVWTPLTGLSLLLFFA FASQCMSTLAVTKKETGSLLWPTVQFLYMTTLAIFTSFLVFQLGKILGFV >Mature_690_residues MKEKNIYLVGNPNCGKTTLFNQLTGLNQKTGNFSGVTVEKKEGVVYLPNLELKITDLPGTYGLGGIAEDKKIAYEVLLKR KENEVVIYVLDALNLERGLQFLLQIIDMGVPTLVVLTMKDVLEKKRIQLDLKKLKHSLGLEIVLVNAKSGEGISELKTLL SKEESYRKQKRLWTWGSKEESFLTSLKQKLKITTNEAEFFLSQALKFLNHDPHLQDSRYLNQFPNETKQFLTKELESKPL QFAYQEEMIHRSILIKKIISETIHYPIAIQGSWEERLDRIFLHPILGFVCFFLLMGLLFQSLFSFAEIPMDLIEEGITGL QETIGNVLSDGPLKSLLIEGILGGVGSVVVFVPQIALLFLFIGILEESGYLARASFLMDRLMGKFGLSGKSFIPLLSSAA CAVPAILGTRTIENKSDRFTTIMVSPLIMCSARYPVYILIVGTVFSYPPIFGIFNVQGFVLFSMFFLGMIVSFTFALIFR KTVFKENASYFVMELPRYNLPSFKSLFFTVYGKVKSFLATAGQIILYISVILWFLSHFPAEYKDNVWKTSPIETSYIGRV GKVMEPAIEPLGFDWKIGISILTSFAAREVMVSTLAVLYGSEEEGEESESLRETLRADKKPDGSPVWTPLTGLSLLLFFA FASQCMSTLAVTKKETGSLLWPTVQFLYMTTLAIFTSFLVFQLGKILGFV
Specific function: Fe(2+) uptake system, probably driven by GTP (Probable)
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the feoB (TC 9.A.8) family
Homologues:
Organism=Escherichia coli, GI1789813, Length=642, Percent_Identity=32.2429906542056, Blast_Score=294, Evalue=2e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FEOB_LEPBP (Q5XPH7)
Other databases:
- EMBL: AY744289 - EMBL: CP000786 - RefSeq: YP_001838280.1 - ProteinModelPortal: Q5XPH7 - SMR: Q5XPH7 - GeneID: 6220966 - GenomeReviews: CP000786_GR - KEGG: lbi:LEPBI_I0879 - HOGENOM: HBG731320 - OMA: FGCSIPA - ProtClustDB: CLSK814200 - BioCyc: LBIF456481:LEPBI_I0879-MONOMER - InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR006073 - InterPro: IPR005225 - PRINTS: PR00326 - TIGRFAMs: TIGR00437 - TIGRFAMs: TIGR00231
Pfam domain/function: PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate
EC number: NA
Molecular weight: Translated: 77650; Mature: 77650
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x193c6134)-; HASH(0x4086427c)-; HASH(0x1981cb2c)-; HASH(0x19163cd4)-; HASH(0x1997bb10)-; HASH(0x19f1fe28)-; HASH(0x197caa18)-; HASH(0x408644c8)-;
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKNIYLVGNPNCGKTTLFNQLTGLNQKTGNFSGVTVEKKEGVVYLPNLELKITDLPGT CCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEECCCEEEEEECCCC YGLGGIAEDKKIAYEVLLKRKENEVVIYVLDALNLERGLQFLLQIIDMGVPTLVVLTMKD CCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHH VLEKKRIQLDLKKLKHSLGLEIVLVNAKSGEGISELKTLLSKEESYRKQKRLWTWGSKEE HHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH SFLTSLKQKLKITTNEAEFFLSQALKFLNHDPHLQDSRYLNQFPNETKQFLTKELESKPL HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCH QFAYQEEMIHRSILIKKIISETIHYPIAIQGSWEERLDRIFLHPILGFVCFFLLMGLLFQ HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLFSFAEIPMDLIEEGITGLQETIGNVLSDGPLKSLLIEGILGGVGSVVVFVPQIALLFL HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIGILEESGYLARASFLMDRLMGKFGLSGKSFIPLLSSAACAVPAILGTRTIENKSDRFT HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCH TIMVSPLIMCSARYPVYILIVGTVFSYPPIFGIFNVQGFVLFSMFFLGMIVSFTFALIFR HHHHHHHHHHCCCCCEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTVFKENASYFVMELPRYNLPSFKSLFFTVYGKVKSFLATAGQIILYISVILWFLSHFPA HHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EYKDNVWKTSPIETSYIGRVGKVMEPAIEPLGFDWKIGISILTSFAAREVMVSTLAVLYG HHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC SEEEGEESESLRETLRADKKPDGSPVWTPLTGLSLLLFFAFASQCMSTLAVTKKETGSLL CCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH WPTVQFLYMTTLAIFTSFLVFQLGKILGFV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCH >Mature Secondary Structure MKEKNIYLVGNPNCGKTTLFNQLTGLNQKTGNFSGVTVEKKEGVVYLPNLELKITDLPGT CCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEECCCEEEEEECCCC YGLGGIAEDKKIAYEVLLKRKENEVVIYVLDALNLERGLQFLLQIIDMGVPTLVVLTMKD CCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHH VLEKKRIQLDLKKLKHSLGLEIVLVNAKSGEGISELKTLLSKEESYRKQKRLWTWGSKEE HHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH SFLTSLKQKLKITTNEAEFFLSQALKFLNHDPHLQDSRYLNQFPNETKQFLTKELESKPL HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCH QFAYQEEMIHRSILIKKIISETIHYPIAIQGSWEERLDRIFLHPILGFVCFFLLMGLLFQ HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLFSFAEIPMDLIEEGITGLQETIGNVLSDGPLKSLLIEGILGGVGSVVVFVPQIALLFL HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIGILEESGYLARASFLMDRLMGKFGLSGKSFIPLLSSAACAVPAILGTRTIENKSDRFT HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCH TIMVSPLIMCSARYPVYILIVGTVFSYPPIFGIFNVQGFVLFSMFFLGMIVSFTFALIFR HHHHHHHHHHCCCCCEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTVFKENASYFVMELPRYNLPSFKSLFFTVYGKVKSFLATAGQIILYISVILWFLSHFPA HHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EYKDNVWKTSPIETSYIGRVGKVMEPAIEPLGFDWKIGISILTSFAAREVMVSTLAVLYG HHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC SEEEGEESESLRETLRADKKPDGSPVWTPLTGLSLLLFFAFASQCMSTLAVTKKETGSLL CCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH WPTVQFLYMTTLAIFTSFLVFQLGKILGFV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA