Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is hisB
Identifier: 183220279
GI number: 183220279
Start: 893149
End: 893742
Strand: Direct
Name: hisB
Synonym: LEPBI_I0874
Alternate gene names: 183220279
Gene position: 893149-893742 (Clockwise)
Preceding gene: 183220278
Following gene: 183220280
Centisome position: 24.81
GC content: 44.28
Gene sequence:
>594_bases ATGCTTAGGAATATGGTGGAATCCAGAAAAACATCCGAAACGGACATCCGCTTGGACCTAAACCTCCGAGGCAGTGGTGT TTATGCATTTGATACAGAAATCCCTTTTTTTGAGCATATGCTCTCTCATATCGCCAAACATGGCCTAATTGACATGGATC TAAAACTACGGGGAGACATTGGCATTGATTGCCACCACTCCGTAGAAGATACGGCCATTCTACTTGGTCAAATGATCCAC ACCCAACTGGGGGACAAAAAAGGAATCTTTCGGTATGGAAATTTCACCCTTCCCATGGATGAAGTTTTGACCACAGTTGC CGTTGATCTTGGTGGAAGATTTTATTTTAAGTACACTGGACCTGCACTCGACGGCAAGTTTGGTATTTATGACGCAGAAC TCACATTAGAGTTTTTACAAAAGCTTGCCCTCAATGCTAAAATGAACCTTCACGTTGTGGTTCATTACGGAGAAAACAGA CACCATATCCACGAGTCGATTTTTAAGGCTTTGGGAAAGGCACTCCGGCAAGCCATTGCAATCGACACGAGCGCCAAAGA CCAAATTCCATCCACAAAGGGAATGCTCGAGTGA
Upstream 100 bases:
>100_bases GTTTTTGGGTTTTTATTGGATATAATTTGGTAGGTGTTTTGAGCTTCGCTTCCTAATTCTCACTCACATTCTCTCTTGAC AGCTGGGTTTTCTACCAAAC
Downstream 100 bases:
>100_bases TCGCTGTTTTGGATTTTGGAATGGGAAATATCCATTCCTTGTTAAAGGCAGTCTCGCTATATACAAACGATTTTGTTTTT ACGAGTGATCCCGAAAAGGT
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MLRNMVESRKTSETDIRLDLNLRGSGVYAFDTEIPFFEHMLSHIAKHGLIDMDLKLRGDIGIDCHHSVEDTAILLGQMIH TQLGDKKGIFRYGNFTLPMDEVLTTVAVDLGGRFYFKYTGPALDGKFGIYDAELTLEFLQKLALNAKMNLHVVVHYGENR HHIHESIFKALGKALRQAIAIDTSAKDQIPSTKGMLE
Sequences:
>Translated_197_residues MLRNMVESRKTSETDIRLDLNLRGSGVYAFDTEIPFFEHMLSHIAKHGLIDMDLKLRGDIGIDCHHSVEDTAILLGQMIH TQLGDKKGIFRYGNFTLPMDEVLTTVAVDLGGRFYFKYTGPALDGKFGIYDAELTLEFLQKLALNAKMNLHVVVHYGENR HHIHESIFKALGKALRQAIAIDTSAKDQIPSTKGMLE >Mature_197_residues MLRNMVESRKTSETDIRLDLNLRGSGVYAFDTEIPFFEHMLSHIAKHGLIDMDLKLRGDIGIDCHHSVEDTAILLGQMIH TQLGDKKGIFRYGNFTLPMDEVLTTVAVDLGGRFYFKYTGPALDGKFGIYDAELTLEFLQKLALNAKMNLHVVVHYGENR HHIHESIFKALGKALRQAIAIDTSAKDQIPSTKGMLE
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family
Homologues:
Organism=Escherichia coli, GI87082027, Length=188, Percent_Identity=40.9574468085106, Blast_Score=139, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6324776, Length=212, Percent_Identity=33.4905660377358, Blast_Score=108, Evalue=4e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS7_LEPBA (B0SDS4)
Other databases:
- EMBL: CP000777 - RefSeq: YP_001961952.1 - ProteinModelPortal: B0SDS4 - SMR: B0SDS4 - GeneID: 6389337 - GenomeReviews: CP000777_GR - KEGG: lbf:LBF_0841 - HOGENOM: HBG289010 - OMA: TLHVETL - ProtClustDB: CLSK573360 - BioCyc: LBIF355278:LBF_0841-MONOMER - GO: GO:0005737 - HAMAP: MF_00076 - InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568
Pfam domain/function: PF00475 IGPD; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =4.2.1.19
Molecular weight: Translated: 22172; Mature: 22172
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: PS00954 IGP_DEHYDRATASE_1; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRNMVESRKTSETDIRLDLNLRGSGVYAFDTEIPFFEHMLSHIAKHGLIDMDLKLRGDI CCCHHHHHCCCCCCEEEEEEEECCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCC GIDCHHSVEDTAILLGQMIHTQLGDKKGIFRYGNFTLPMDEVLTTVAVDLGGRFYFKYTG CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCEEEEEEEC PALDGKFGIYDAELTLEFLQKLALNAKMNLHVVVHYGENRHHIHESIFKALGKALRQAIA CCCCCCCCEEEHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH IDTSAKDQIPSTKGMLE CCCCCCCCCCCCCCCCC >Mature Secondary Structure MLRNMVESRKTSETDIRLDLNLRGSGVYAFDTEIPFFEHMLSHIAKHGLIDMDLKLRGDI CCCHHHHHCCCCCCEEEEEEEECCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCC GIDCHHSVEDTAILLGQMIHTQLGDKKGIFRYGNFTLPMDEVLTTVAVDLGGRFYFKYTG CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCEEEEEEEC PALDGKFGIYDAELTLEFLQKLALNAKMNLHVVVHYGENRHHIHESIFKALGKALRQAIA CCCCCCCCEEEHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH IDTSAKDQIPSTKGMLE CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA