Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
---|---|
Accession | NC_010602 |
Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183220257
Identifier: 183220257
GI number: 183220257
Start: 867479
End: 867889
Strand: Reverse
Name: 183220257
Synonym: LEPBI_I0850
Alternate gene names: NA
Gene position: 867889-867479 (Counterclockwise)
Preceding gene: 183220260
Following gene: 183220255
Centisome position: 24.11
GC content: 37.96
Gene sequence:
>411_bases ATGGATTTTCTCTTATATTTCTATTCGGTATTATTTGGAATCATTCTGATTGCGCCATTTATATTGTTTTACTATCGGTT CCAAGTGGATGAATCTCCCTTTGGGAAAGAAACCGAGGCACACCTCAAAGCTATTTATGAAAAAAAGAGTAACCTACTCG ATTCTTTAAAAGACATTCGATCTGACTTTGATTCTGGAAAACTCACAGAAGAGGAATTCCAATCTCAATCCATTCCTTAC ATAGAAGAATTGGAAACAGTTGAATCGGAATTAGTGGAAAAACGAAAAGGGACAGTAACGATGAACCAACCGAAGATCAA CTCAAACTGGACATGTGCCAATTGTGGATCTTTTGTTCCAGTACCCAATGCAAAATTTTGCCCGAACTGTGGCACTGGTC GATTGGCATAA
Upstream 100 bases:
>100_bases TCTTCTATCAGTGAGTTGGATACGGTCATAAATCTAAAATCTCTTCTTTGACCAAAGATAAAGAGATTGCCTAAAAATAA AAAGTCCAAATTCTGAACGT
Downstream 100 bases:
>100_bases TTCAAAAACTGATGATTCAAACAAAAGATTTCATTTGTGTGGAATGATAGAACTAGAAATTGAAATTTGTTTTTGATTAC ATTCTATCGACTTGGAATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MDFLLYFYSVLFGIILIAPFILFYYRFQVDESPFGKETEAHLKAIYEKKSNLLDSLKDIRSDFDSGKLTEEEFQSQSIPY IEELETVESELVEKRKGTVTMNQPKINSNWTCANCGSFVPVPNAKFCPNCGTGRLA
Sequences:
>Translated_136_residues MDFLLYFYSVLFGIILIAPFILFYYRFQVDESPFGKETEAHLKAIYEKKSNLLDSLKDIRSDFDSGKLTEEEFQSQSIPY IEELETVESELVEKRKGTVTMNQPKINSNWTCANCGSFVPVPNAKFCPNCGTGRLA >Mature_136_residues MDFLLYFYSVLFGIILIAPFILFYYRFQVDESPFGKETEAHLKAIYEKKSNLLDSLKDIRSDFDSGKLTEEEFQSQSIPY IEELETVESELVEKRKGTVTMNQPKINSNWTCANCGSFVPVPNAKFCPNCGTGRLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15556; Mature: 15556
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFLLYFYSVLFGIILIAPFILFYYRFQVDESPFGKETEAHLKAIYEKKSNLLDSLKDIR CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SDFDSGKLTEEEFQSQSIPYIEELETVESELVEKRKGTVTMNQPKINSNWTCANCGSFVP HHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCC VPNAKFCPNCGTGRLA CCCCCCCCCCCCCCCC >Mature Secondary Structure MDFLLYFYSVLFGIILIAPFILFYYRFQVDESPFGKETEAHLKAIYEKKSNLLDSLKDIR CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SDFDSGKLTEEEFQSQSIPYIEELETVESELVEKRKGTVTMNQPKINSNWTCANCGSFVP HHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCC VPNAKFCPNCGTGRLA CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA