| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is serB [C]
Identifier: 183220239
GI number: 183220239
Start: 844744
End: 845661
Strand: Direct
Name: serB [C]
Synonym: LEPBI_I0832
Alternate gene names: 183220239
Gene position: 844744-845661 (Clockwise)
Preceding gene: 183220238
Following gene: 183220245
Centisome position: 23.47
GC content: 39.98
Gene sequence:
>918_bases ATGAATTCACTGCTTTTGATCTCTCGTTCCCCGATTCCTGATTCCATTTTACACAAAACATTCCCCACACACATTCGAAA TGTGAGTGATCCGTCCTTCCAGGGGAATCAACCAAGTTCTGTTTCTCTTTCAAAGATTTTGTTTTCTAACAAGCTGGGAT TACACTGTGTGAGAATCGAACGCAGTGAAACACTTAGCCGTGACCAAATTTTACACATTCGCGACGAATTGGCAAAGGAC AAAATCGATTTTTTAGTTATCAATTCTTTGTTACCAAAATCAAAAGAATCTCTTTTTGTTTTTGATATGGATTCCACTGT CATCAAGGAAGAAGTGATCGATGAACTCGCAAGAAAACATGGTGTGTATGAAGAAGTTGCGGGTGTGACAAAAAAAGCGA TGGAGGGCGGTATGGGATTCGATGAAGCCCTAAGGCTTCGTGTAGCTCACCTTGCCGGTTTATCGATCCAAAGTTTTAAA GAAGTATATGATGTATTACATTTAAACGATGGAATGGAAACTGTATTTCAGTTTGTTCCATCAAACGGATGTAAGCTTGG AATCTTAAGTGGGGGATTTAGTCCCGTCCTCGAATTATTTTCAAATCAATATCCAGTGGATTTTTTTCGCGCAAATGGAC TCGAAGAAAAGGGCGGCGTTTTTACAGGCCAAATCCACGGAGAAATCATCAACCGAGAAAAAAAAGAATTCTATTTAAAA CAGTATGCAAGCGAACTTTCCATCCCGATCGAGAGGGTGGTGGCTGTTGGCGACGGAGCAAACGATGCACTTATGTTAAA TGCCGCTGGCATTGGCATCGGAATCCATGCGAAACAAGGATTAAAGGACAAAATTACCAATTGGATTGAATTTACAGATT TATCGGCTTTAATTTTCCTCTTGGAGAATTCGTTTTAA
Upstream 100 bases:
>100_bases GTGAAGAGTTCATTCGTCCCAATGGCGACAGTTTACATTTTAATGAAAAAGGGTATGAAATTTGGGGTAAAAAATTACGA CCTTATTTACAAAAATAAAA
Downstream 100 bases:
>100_bases TTCATCTAAGATCGAAAGAGCCTCAAGAGGTGGAATTTTGTTTGGATCAATTTGAGAGATTCTTTTGATCACCTTTTCTT CGTTTGCTGATAAACCATTT
Product: phosphoserine phosphatase
Products: NA
Alternate protein names: PSP; PSPase; O-phosphoserine phosphohydrolase [H]
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MNSLLLISRSPIPDSILHKTFPTHIRNVSDPSFQGNQPSSVSLSKILFSNKLGLHCVRIERSETLSRDQILHIRDELAKD KIDFLVINSLLPKSKESLFVFDMDSTVIKEEVIDELARKHGVYEEVAGVTKKAMEGGMGFDEALRLRVAHLAGLSIQSFK EVYDVLHLNDGMETVFQFVPSNGCKLGILSGGFSPVLELFSNQYPVDFFRANGLEEKGGVFTGQIHGEIINREKKEFYLK QYASELSIPIERVVAVGDGANDALMLNAAGIGIGIHAKQGLKDKITNWIEFTDLSALIFLLENSF
Sequences:
>Translated_305_residues MNSLLLISRSPIPDSILHKTFPTHIRNVSDPSFQGNQPSSVSLSKILFSNKLGLHCVRIERSETLSRDQILHIRDELAKD KIDFLVINSLLPKSKESLFVFDMDSTVIKEEVIDELARKHGVYEEVAGVTKKAMEGGMGFDEALRLRVAHLAGLSIQSFK EVYDVLHLNDGMETVFQFVPSNGCKLGILSGGFSPVLELFSNQYPVDFFRANGLEEKGGVFTGQIHGEIINREKKEFYLK QYASELSIPIERVVAVGDGANDALMLNAAGIGIGIHAKQGLKDKITNWIEFTDLSALIFLLENSF >Mature_305_residues MNSLLLISRSPIPDSILHKTFPTHIRNVSDPSFQGNQPSSVSLSKILFSNKLGLHCVRIERSETLSRDQILHIRDELAKD KIDFLVINSLLPKSKESLFVFDMDSTVIKEEVIDELARKHGVYEEVAGVTKKAMEGGMGFDEALRLRVAHLAGLSIQSFK EVYDVLHLNDGMETVFQFVPSNGCKLGILSGGFSPVLELFSNQYPVDFFRANGLEEKGGVFTGQIHGEIINREKKEFYLK QYASELSIPIERVVAVGDGANDALMLNAAGIGIGIHAKQGLKDKITNWIEFTDLSALIFLLENSF
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
Organism=Homo sapiens, GI46249388, Length=225, Percent_Identity=28.8888888888889, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI1790849, Length=208, Percent_Identity=38.9423076923077, Blast_Score=135, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6321647, Length=211, Percent_Identity=34.1232227488152, Blast_Score=126, Evalue=4e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR023190 - InterPro: IPR004469 [H]
Pfam domain/function: PF01842 ACT; PF00702 Hydrolase [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 33882; Mature: 33882
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSLLLISRSPIPDSILHKTFPTHIRNVSDPSFQGNQPSSVSLSKILFSNKLGLHCVRIE CCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEC RSETLSRDQILHIRDELAKDKIDFLVINSLLPKSKESLFVFDMDSTVIKEEVIDELARKH CHHHCCHHHHHHHHHHHHHHHHHEEEEHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHC GVYEEVAGVTKKAMEGGMGFDEALRLRVAHLAGLSIQSFKEVYDVLHLNDGMETVFQFVP CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCC SNGCKLGILSGGFSPVLELFSNQYPVDFFRANGLEEKGGVFTGQIHGEIINREKKEFYLK CCCCEEEEECCCHHHHHHHHCCCCCCHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHH QYASELSIPIERVVAVGDGANDALMLNAAGIGIGIHAKQGLKDKITNWIEFTDLSALIFL HHHHHHCCCHHHEEEECCCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH LENSF HHCCC >Mature Secondary Structure MNSLLLISRSPIPDSILHKTFPTHIRNVSDPSFQGNQPSSVSLSKILFSNKLGLHCVRIE CCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEC RSETLSRDQILHIRDELAKDKIDFLVINSLLPKSKESLFVFDMDSTVIKEEVIDELARKH CHHHCCHHHHHHHHHHHHHHHHHEEEEHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHC GVYEEVAGVTKKAMEGGMGFDEALRLRVAHLAGLSIQSFKEVYDVLHLNDGMETVFQFVP CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCC SNGCKLGILSGGFSPVLELFSNQYPVDFFRANGLEEKGGVFTGQIHGEIINREKKEFYLK CCCCEEEEECCCHHHHHHHHCCCCCCHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHH QYASELSIPIERVVAVGDGANDALMLNAAGIGIGIHAKQGLKDKITNWIEFTDLSALIFL HHHHHHCCCHHHEEEECCCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH LENSF HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]