Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220229
Identifier: 183220229
GI number: 183220229
Start: 835217
End: 836428
Strand: Reverse
Name: 183220229
Synonym: LEPBI_I0822
Alternate gene names: NA
Gene position: 836428-835217 (Counterclockwise)
Preceding gene: 183220231
Following gene: 183220228
Centisome position: 23.24
GC content: 38.45
Gene sequence:
>1212_bases ATGAATTGGAAATTTAAAATCAGAAAACCTCAACATGGGACAACGTTGACATGGGAATTGTACTTTCCACCCGGAACTTC GACATGGGTAGGCGAAAAGGTAACAGAAATTTTAGAACAAGTCCCCCTTCCCAACCAACCAGAAGTTAATGTACGCACGT TTTCAGAAAAAATTAAAATTGAAAATACGAATGCCCATCAGATCACCTACCTTCTGTTTCATGGTTATTTCATCAGAGAC CTTCGCCTTGTGATTGCTCGTACGACTGATTGGGATATGTCAGCAGACAAACGAGAAGAAGAATGGGACAGAATTTTAAC AGAAGCAGTCTCCATCGCAAAACCTCTTTTTTCCAATCCTGAAACCAAATTTTATGAAATCAAAGAAAACTTACACATCA GTTTTTTTGAAGATGAAGTGACGGTTTCACTTTCCGTTTTAGGGGAACCCGGTTATAAACGAGGGATCAAAGCAAATTTC CCGACAAGCGCACCCATTCCGGAAGACCTAGCTTCTATTCTCATCGAACAATGTTTTCAAATTTTTTCCGTTCCTAAATC TAAGGTGAATTCAGTTTATATCCCATTTGCTGGTACAATGACATTCGCCACTGAATGGAAATTAGGTGAGGAAAAACTGC CTTTTTTAACTTTACCAAGGGATTTTGTTTGGAAGAAACTAACCCTTTTCCCGAACAAATCACATGAACATTTTCTAAAA AAACAAAAAGCTCTCGGTGCGATCGAATCGAACTTCACACCAATCGTGATCCAAGATACAGACCCAGCTCTCACATCTTA TTGGACCAAAGAATTCTCAAATTGGAAAGATTGGATCCATGTGGACACAATAGATCATACCATTTCCGATTTTTTAAAAA CCTTCCCTGTTTTCTCTGAGGGAAAAACAAACACTTCCCATTATTTTTTACCCCTAAACCCTCCTTATGGGTATCGAAAG AACGAAAGGACTGGCCCGGACGAAAAATTATATGCAAAAATTGCAAACCGCCTCGAAGTTTTATCTAAGGACCTAAAGAA TGTGTTTTCAATCATTGGATTCATTCTATGTCCAACCGAAGAGAAATGGATTGATTGTATGAAAGAATTGCGTAATTTCT CAAAAAAAACAATCCATGTCACACATGGTGGGATCGATTTACGGGTGTTATTTTTTCATTCGGAGGTTCGTTCTGAAAGA CGTGCAAATTGA
Upstream 100 bases:
>100_bases ACCCCAAAGAATGGCGGCAATCACCAAAAAGAGTTCTGGCGTGAAGATCCTAGACATGTAAGGTCAATCTTTCCCAAGAA ATACGGATAGCAAGGAAAAG
Downstream 100 bases:
>100_bases ATCTAGCTGGAAAGAGGTTTTAAAAGATGAATTTAAAAAACCATATTTTACAGAATTAAGGGAGTGGGTGAGAGAAAGAT ACAAATCAACGATCGTTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MNWKFKIRKPQHGTTLTWELYFPPGTSTWVGEKVTEILEQVPLPNQPEVNVRTFSEKIKIENTNAHQITYLLFHGYFIRD LRLVIARTTDWDMSADKREEEWDRILTEAVSIAKPLFSNPETKFYEIKENLHISFFEDEVTVSLSVLGEPGYKRGIKANF PTSAPIPEDLASILIEQCFQIFSVPKSKVNSVYIPFAGTMTFATEWKLGEEKLPFLTLPRDFVWKKLTLFPNKSHEHFLK KQKALGAIESNFTPIVIQDTDPALTSYWTKEFSNWKDWIHVDTIDHTISDFLKTFPVFSEGKTNTSHYFLPLNPPYGYRK NERTGPDEKLYAKIANRLEVLSKDLKNVFSIIGFILCPTEEKWIDCMKELRNFSKKTIHVTHGGIDLRVLFFHSEVRSER RAN
Sequences:
>Translated_403_residues MNWKFKIRKPQHGTTLTWELYFPPGTSTWVGEKVTEILEQVPLPNQPEVNVRTFSEKIKIENTNAHQITYLLFHGYFIRD LRLVIARTTDWDMSADKREEEWDRILTEAVSIAKPLFSNPETKFYEIKENLHISFFEDEVTVSLSVLGEPGYKRGIKANF PTSAPIPEDLASILIEQCFQIFSVPKSKVNSVYIPFAGTMTFATEWKLGEEKLPFLTLPRDFVWKKLTLFPNKSHEHFLK KQKALGAIESNFTPIVIQDTDPALTSYWTKEFSNWKDWIHVDTIDHTISDFLKTFPVFSEGKTNTSHYFLPLNPPYGYRK NERTGPDEKLYAKIANRLEVLSKDLKNVFSIIGFILCPTEEKWIDCMKELRNFSKKTIHVTHGGIDLRVLFFHSEVRSER RAN >Mature_403_residues MNWKFKIRKPQHGTTLTWELYFPPGTSTWVGEKVTEILEQVPLPNQPEVNVRTFSEKIKIENTNAHQITYLLFHGYFIRD LRLVIARTTDWDMSADKREEEWDRILTEAVSIAKPLFSNPETKFYEIKENLHISFFEDEVTVSLSVLGEPGYKRGIKANF PTSAPIPEDLASILIEQCFQIFSVPKSKVNSVYIPFAGTMTFATEWKLGEEKLPFLTLPRDFVWKKLTLFPNKSHEHFLK KQKALGAIESNFTPIVIQDTDPALTSYWTKEFSNWKDWIHVDTIDHTISDFLKTFPVFSEGKTNTSHYFLPLNPPYGYRK NERTGPDEKLYAKIANRLEVLSKDLKNVFSIIGFILCPTEEKWIDCMKELRNFSKKTIHVTHGGIDLRVLFFHSEVRSER RAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46933; Mature: 46933
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWKFKIRKPQHGTTLTWELYFPPGTSTWVGEKVTEILEQVPLPNQPEVNVRTFSEKIKI CCCEEEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCEEEE ENTNAHQITYLLFHGYFIRDLRLVIARTTDWDMSADKREEEWDRILTEAVSIAKPLFSNP ECCCCCEEEEHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC ETKFYEIKENLHISFFEDEVTVSLSVLGEPGYKRGIKANFPTSAPIPEDLASILIEQCFQ CCEEEEECCCCEEEEECCCEEEEEEEECCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHH IFSVPKSKVNSVYIPFAGTMTFATEWKLGEEKLPFLTLPRDFVWKKLTLFPNKSHEHFLK HHCCCCHHCCEEEEEECCCEEEEEECCCCCCCCCEEECCHHHHHHEEEECCCCCHHHHHH KQKALGAIESNFTPIVIQDTDPALTSYWTKEFSNWKDWIHVDTIDHTISDFLKTFPVFSE HHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCC GKTNTSHYFLPLNPPYGYRKNERTGPDEKLYAKIANRLEVLSKDLKNVFSIIGFILCPTE CCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC EKWIDCMKELRNFSKKTIHVTHGGIDLRVLFFHSEVRSERRAN HHHHHHHHHHHCCCCEEEEEEECCEEEEEEEEEHHHHHHHCCC >Mature Secondary Structure MNWKFKIRKPQHGTTLTWELYFPPGTSTWVGEKVTEILEQVPLPNQPEVNVRTFSEKIKI CCCEEEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCEEEE ENTNAHQITYLLFHGYFIRDLRLVIARTTDWDMSADKREEEWDRILTEAVSIAKPLFSNP ECCCCCEEEEHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC ETKFYEIKENLHISFFEDEVTVSLSVLGEPGYKRGIKANFPTSAPIPEDLASILIEQCFQ CCEEEEECCCCEEEEECCCEEEEEEEECCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHH IFSVPKSKVNSVYIPFAGTMTFATEWKLGEEKLPFLTLPRDFVWKKLTLFPNKSHEHFLK HHCCCCHHCCEEEEEECCCEEEEEECCCCCCCCCEEECCHHHHHHEEEECCCCCHHHHHH KQKALGAIESNFTPIVIQDTDPALTSYWTKEFSNWKDWIHVDTIDHTISDFLKTFPVFSE HHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCC GKTNTSHYFLPLNPPYGYRKNERTGPDEKLYAKIANRLEVLSKDLKNVFSIIGFILCPTE CCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC EKWIDCMKELRNFSKKTIHVTHGGIDLRVLFFHSEVRSERRAN HHHHHHHHHHHCCCCEEEEEEECCEEEEEEEEEHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA