| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220188
Identifier: 183220188
GI number: 183220188
Start: 796250
End: 797284
Strand: Direct
Name: 183220188
Synonym: LEPBI_I0778
Alternate gene names: NA
Gene position: 796250-797284 (Clockwise)
Preceding gene: 183220187
Following gene: 183220190
Centisome position: 22.12
GC content: 36.52
Gene sequence:
>1035_bases TTGTTCATACAAATGGATTTTAAAAAAATTATACTCATCGTTTTCCTCTTCCTCGTTCTATTTTTAAGCTTATTCTATCT ACTCAAACAAAACGATAAAGATAGTGTTTCGAAGGATGCTCTTTCTCCAGAAGAACAAATGGTTTCCGATCGGATTTCTC CAATGGGGAATGGAGAAGGGTTTTGGGATGAGGCAATCTCTCCCTTTCGCGAGGATAGAACCAAACCTTATTTGGAATTA CTCGAAGATTTAAAATCAGGTAAGGTAAATTTTGTTTGGGAAGTTTGGGCGCTTCGTCGCAAATGTAATCCTGATTTTAC ACCTGACCAATGTAATGCCACAATTCTTGCTTACATTGATGCGGAATATGATTCACCTGACAGAGAAAAGGTGAAGGATT TATTTGTTTCCTACTTTCGTTATGAAGAGGAATACCGCAAATGGGAACAACCAACCGACTTAAATTTTATCGAATTGTAT GAAAAAATCAAAGCCAAACGAAGGGAAATCCTTTCTGACAAAGCAGATTTGATTTTTGGAATGGAAGAGTCACAAGTTTC GTTTCTCGAAGGAACAAACAATTTTATAAAACAAACAGCAGGTGTTCCCACCGAACTTCGAGTGAAACAGTTCGAAGAGT TTAAGAAAAAAACATATGGGAATTATTATGATTCTTTGGTATCCAGAGAAGATAAGTTCGACCATTACCAAATGGAGATG TCACTTCGGGATAAAGAATTAATTTCCATCACTGACCCAAAGGAAAAGGAAAAGTATCTTTTTAAAATTGAATCTAAGTA CTTTGGTAAAGAAAAAGCAGAAGCACTCGCAAACGAACGAAAAAAAGAAACCAAACTTTGGGAATCCGTTTCAACTTATG AAGCGAAAGAAAAAGAATTTTTAAGAGAGAACAGAAATTTGTCTGAAGCGGATAAAGAGAAAAAACTGAAGGAACTTCGG ATCCAAATCTTGGGATCCGAAGAAGAAGCCGATGCCTATCTCCGCAGAAAAAACATTGAGGAAGCGGGCAAATAA
Upstream 100 bases:
>100_bases CATTTAAGAAAAAGCCGGTGTCACCCATCGGCTTTTTTTTGTACCCATCTCATTCACTTCTAATTTCCAATCGATTCTAG AATGTTTTCCAAAGGAATTT
Downstream 100 bases:
>100_bases AGCCGCTTCGTGTTACTCACTTTTTGTTAGGTTCATTTGACTCGGAGTGGGTTCTTTTTTGTATTTCTCGTAGGCATTCA TGGTTTCTAAGTATTCATTT
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MFIQMDFKKIILIVFLFLVLFLSLFYLLKQNDKDSVSKDALSPEEQMVSDRISPMGNGEGFWDEAISPFREDRTKPYLEL LEDLKSGKVNFVWEVWALRRKCNPDFTPDQCNATILAYIDAEYDSPDREKVKDLFVSYFRYEEEYRKWEQPTDLNFIELY EKIKAKRREILSDKADLIFGMEESQVSFLEGTNNFIKQTAGVPTELRVKQFEEFKKKTYGNYYDSLVSREDKFDHYQMEM SLRDKELISITDPKEKEKYLFKIESKYFGKEKAEALANERKKETKLWESVSTYEAKEKEFLRENRNLSEADKEKKLKELR IQILGSEEEADAYLRRKNIEEAGK
Sequences:
>Translated_344_residues MFIQMDFKKIILIVFLFLVLFLSLFYLLKQNDKDSVSKDALSPEEQMVSDRISPMGNGEGFWDEAISPFREDRTKPYLEL LEDLKSGKVNFVWEVWALRRKCNPDFTPDQCNATILAYIDAEYDSPDREKVKDLFVSYFRYEEEYRKWEQPTDLNFIELY EKIKAKRREILSDKADLIFGMEESQVSFLEGTNNFIKQTAGVPTELRVKQFEEFKKKTYGNYYDSLVSREDKFDHYQMEM SLRDKELISITDPKEKEKYLFKIESKYFGKEKAEALANERKKETKLWESVSTYEAKEKEFLRENRNLSEADKEKKLKELR IQILGSEEEADAYLRRKNIEEAGK >Mature_344_residues MFIQMDFKKIILIVFLFLVLFLSLFYLLKQNDKDSVSKDALSPEEQMVSDRISPMGNGEGFWDEAISPFREDRTKPYLEL LEDLKSGKVNFVWEVWALRRKCNPDFTPDQCNATILAYIDAEYDSPDREKVKDLFVSYFRYEEEYRKWEQPTDLNFIELY EKIKAKRREILSDKADLIFGMEESQVSFLEGTNNFIKQTAGVPTELRVKQFEEFKKKTYGNYYDSLVSREDKFDHYQMEM SLRDKELISITDPKEKEKYLFKIESKYFGKEKAEALANERKKETKLWESVSTYEAKEKEFLRENRNLSEADKEKKLKELR IQILGSEEEADAYLRRKNIEEAGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40969; Mature: 40969
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFIQMDFKKIILIVFLFLVLFLSLFYLLKQNDKDSVSKDALSPEEQMVSDRISPMGNGEG CEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCC FWDEAISPFREDRTKPYLELLEDLKSGKVNFVWEVWALRRKCNPDFTPDQCNATILAYID CHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCCCCCCCCEEEEEEEE AEYDSPDREKVKDLFVSYFRYEEEYRKWEQPTDLNFIELYEKIKAKRREILSDKADLIFG CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHEEC MEESQVSFLEGTNNFIKQTAGVPTELRVKQFEEFKKKTYGNYYDSLVSREDKFDHYQMEM CCHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHH SLRDKELISITDPKEKEKYLFKIESKYFGKEKAEALANERKKETKLWESVSTYEAKEKEF HHCCCCEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRENRNLSEADKEKKLKELRIQILGSEEEADAYLRRKNIEEAGK HHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHCCC >Mature Secondary Structure MFIQMDFKKIILIVFLFLVLFLSLFYLLKQNDKDSVSKDALSPEEQMVSDRISPMGNGEG CEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCC FWDEAISPFREDRTKPYLELLEDLKSGKVNFVWEVWALRRKCNPDFTPDQCNATILAYID CHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCCCCCCCCEEEEEEEE AEYDSPDREKVKDLFVSYFRYEEEYRKWEQPTDLNFIELYEKIKAKRREILSDKADLIFG CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHEEC MEESQVSFLEGTNNFIKQTAGVPTELRVKQFEEFKKKTYGNYYDSLVSREDKFDHYQMEM CCHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHH SLRDKELISITDPKEKEKYLFKIESKYFGKEKAEALANERKKETKLWESVSTYEAKEKEF HHCCCCEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRENRNLSEADKEKKLKELRIQILGSEEEADAYLRRKNIEEAGK HHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA