| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183220149
Identifier: 183220149
GI number: 183220149
Start: 751610
End: 752506
Strand: Reverse
Name: 183220149
Synonym: LEPBI_I0737
Alternate gene names: NA
Gene position: 752506-751610 (Counterclockwise)
Preceding gene: 183220151
Following gene: 183220144
Centisome position: 20.9
GC content: 37.24
Gene sequence:
>897_bases ATGTCGGATATGTTAGATCTTAATTTTCCAAAAAAGAACGCTACAGAATGGTTGGCCGCTGGTAAATTTTTTGAATTTAA AAAATTTCAAATCTTCTACATCCAAGAAGGTAGAGGACAAAACTTAATCTTACTCCATGGGTTTCCCACTTCCTCTTGGG ATTATTCGAAAATCTTCAATGGGTTAACACGATACTTCAATACTATTGCAATTGACTTTTTAGGATTTGGTTATTCTTCA AAGCCCACCAAACATACATATACGCTCATGGAACAAACCGATATCATCGAAACTTTTATCGAAAAAAATGCTCTCAAACG AGTTAAATTTGTATTCCATGATTACGCTGTCAGTGTTGGACAAGAAATCCTCGCAAGGCATTTGGAACGTTCCGAACGTA AGTATGAAATTGATGGTGCTGTTTTTTTTAATGGAGGACTTTTCCCCCATTTACACCGCCCCACATTCAAACAAAAACTT CTCGCCACACCAATCTTAGGTGCAATCCTCGCAAGGTTTTATGATGAAAAGAAGTTTGGTGTGGCTTTTAGTGATGTGTT TGGAAAAAATACCAAACCCACTGATAAAGAAATTTCCGTTTTATGGAAACTCATCACTTACCCAAACAAAGTCCTTATCC CTCATAAATTACTTAAGTACATCGCCGAAAGGAGGTTACACGGAGTACGATGGAAAAATGCTCTTCTCCAAACAGAAGTC CCACTTCTATTCATCAATGGAGGGGAAGATCCGGTGAGTGGAAGCCACCTAGCTGATGAAATCGAAACACTTCCAATCAA AAACAAAAAATTAATCCGATGGCCAAACATTGGACACTACCCTATGTGGGAAAATCCAGAAGAAAGTTTTAAGGAAATTT ACGAATTTTTAAAATAA
Upstream 100 bases:
>100_bases TAAATCAGAGAATATGATTCCATCCTTTATATCATCGGCTTCGAAATATTGAGAAAATAGTAAATTCTTCTATTTGACTC ACTTCTTGAATTGTTGTGCT
Downstream 100 bases:
>100_bases AAAAGGATTCGGCAGTTCAATTTGGAAGGATCATAAAATGAATATGATCCGATCAAAGATTGGATCATATCAGTAACAGA ATCGATTGGTGATTTGAAGA
Product: alpha/beta family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MSDMLDLNFPKKNATEWLAAGKFFEFKKFQIFYIQEGRGQNLILLHGFPTSSWDYSKIFNGLTRYFNTIAIDFLGFGYSS KPTKHTYTLMEQTDIIETFIEKNALKRVKFVFHDYAVSVGQEILARHLERSERKYEIDGAVFFNGGLFPHLHRPTFKQKL LATPILGAILARFYDEKKFGVAFSDVFGKNTKPTDKEISVLWKLITYPNKVLIPHKLLKYIAERRLHGVRWKNALLQTEV PLLFINGGEDPVSGSHLADEIETLPIKNKKLIRWPNIGHYPMWENPEESFKEIYEFLK
Sequences:
>Translated_298_residues MSDMLDLNFPKKNATEWLAAGKFFEFKKFQIFYIQEGRGQNLILLHGFPTSSWDYSKIFNGLTRYFNTIAIDFLGFGYSS KPTKHTYTLMEQTDIIETFIEKNALKRVKFVFHDYAVSVGQEILARHLERSERKYEIDGAVFFNGGLFPHLHRPTFKQKL LATPILGAILARFYDEKKFGVAFSDVFGKNTKPTDKEISVLWKLITYPNKVLIPHKLLKYIAERRLHGVRWKNALLQTEV PLLFINGGEDPVSGSHLADEIETLPIKNKKLIRWPNIGHYPMWENPEESFKEIYEFLK >Mature_297_residues SDMLDLNFPKKNATEWLAAGKFFEFKKFQIFYIQEGRGQNLILLHGFPTSSWDYSKIFNGLTRYFNTIAIDFLGFGYSSK PTKHTYTLMEQTDIIETFIEKNALKRVKFVFHDYAVSVGQEILARHLERSERKYEIDGAVFFNGGLFPHLHRPTFKQKLL ATPILGAILARFYDEKKFGVAFSDVFGKNTKPTDKEISVLWKLITYPNKVLIPHKLLKYIAERRLHGVRWKNALLQTEVP LLFINGGEDPVSGSHLADEIETLPIKNKKLIRWPNIGHYPMWENPEESFKEIYEFLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily [H]
Homologues:
Organism=Homo sapiens, GI29294639, Length=281, Percent_Identity=37.7224199288256, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI29294637, Length=281, Percent_Identity=37.7224199288256, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI29294635, Length=281, Percent_Identity=37.7224199288256, Blast_Score=177, Evalue=1e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 34747; Mature: 34615
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDMLDLNFPKKNATEWLAAGKFFEFKKFQIFYIQEGRGQNLILLHGFPTSSWDYSKIFN CCCCCCCCCCCCCHHHHHHHCCCEEEEEEEEEEEECCCCCEEEEEECCCCCCCCHHHHHH GLTRYFNTIAIDFLGFGYSSKPTKHTYTLMEQTDIIETFIEKNALKRVKFVFHDYAVSVG HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QEILARHLERSERKYEIDGAVFFNGGLFPHLHRPTFKQKLLATPILGAILARFYDEKKFG HHHHHHHHHHHCCEEEECEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCC VAFSDVFGKNTKPTDKEISVLWKLITYPNKVLIPHKLLKYIAERRLHGVRWKNALLQTEV EEHHHHHCCCCCCCHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHCCHHHHHHHHHCCC PLLFINGGEDPVSGSHLADEIETLPIKNKKLIRWPNIGHYPMWENPEESFKEIYEFLK CEEEEECCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHC >Mature Secondary Structure SDMLDLNFPKKNATEWLAAGKFFEFKKFQIFYIQEGRGQNLILLHGFPTSSWDYSKIFN CCCCCCCCCCCCHHHHHHHCCCEEEEEEEEEEEECCCCCEEEEEECCCCCCCCHHHHHH GLTRYFNTIAIDFLGFGYSSKPTKHTYTLMEQTDIIETFIEKNALKRVKFVFHDYAVSVG HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QEILARHLERSERKYEIDGAVFFNGGLFPHLHRPTFKQKLLATPILGAILARFYDEKKFG HHHHHHHHHHHCCEEEECEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCC VAFSDVFGKNTKPTDKEISVLWKLITYPNKVLIPHKLLKYIAERRLHGVRWKNALLQTEV EEHHHHHCCCCCCCHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHCCHHHHHHHHHCCC PLLFINGGEDPVSGSHLADEIETLPIKNKKLIRWPNIGHYPMWENPEESFKEIYEFLK CEEEEECCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]