| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is gltX
Identifier: 183220089
GI number: 183220089
Start: 682296
End: 683849
Strand: Reverse
Name: gltX
Synonym: LEPBI_I0677
Alternate gene names: 183220089
Gene position: 683849-682296 (Counterclockwise)
Preceding gene: 183220090
Following gene: 183220088
Centisome position: 19.0
GC content: 42.86
Gene sequence:
>1554_bases ATGACAGAAGTTCGTACCCGTTTTGCCCCATCCCCCTCCGGATTCCTTCATGTAGGAGGAGCAAGGACTGCCTTATTCAA TTATTTGTATGCCAAGGCCAAAAAGGGAAAATTTTTACTACGCATCGAAGATACTGACCAAGACAGATCCACGGAAGCAT CTTTTAAAATCATTTTAGAATCTCTTAAATGGTTGGGTATGGAATGGGACGAAGGTCCTGGTGTGGGTGGACCCAACGGA CCGTACACGCAATCAGAACGAATTCACATCTACAAAGAATACACTGACAAACTGATCCAAGAAAAAAAAGCATACCGTTG TTTTTGTACAGCGGAAGAACTCGAAGGCAAAAAAAAACAAGCCGACGCCATGGGAATTCCTTACATCTATGATGGAAAAT GTTCTGATCTGTCCGATGCAGAAATAGGTTCCCAACTCGAGAAAAAAATTCCCTTTACGGTTCGATTCAAAACACCACAC AAAATTGTCATCGTAGATGATATGATCCAAGGGAAAGTGAAATTTGAATCCAAACTCATTGGTGATTTTATCATAGTCAA ATCGGATGGATTTCCTTCATATAACTATGCTGTGGTGATCGATGATGCGTTGATGAAGATCACACACGTGATTCGTGGTG TGGGCCATCTCTCTAACACTCCTAGACAAATTTTAATCTTTGAAGCATTTGGATTCCCACTCCCAAGATTTGCTCATGCC AGTGAAATTGTAGGCACTGATGGAAAAAAACTTTCCAAACGTGCCGGTGCCACTTCCGTTCTTGCCTTCCGTGATTTAGG TTACTCCAGCGAAACCATGCGAAACTATATGGCTCTTCTTGGTTGGACTTCTCCTGACGGCAAAGAATACATGAGTGATG AAGAGTTGTGTTCTGTTTTTGATGTGGAACGCTGCTCGAAGTCCCCTGCTACCTTTGATGTCTTCAAAAAACTAAAAGAA GAAGAAAAAGAATCCGTTGATTTTAATAAACTCACGATCCTTGGTCTTGCCGAATACCTAAACCCTAAATCCAAACTCAA TTGGATGTCGAACAAATACATCCGTGACACAAAAATTGAAACCCTTGGCAAAGCATTAGAACCTTTTTTAAAAGACTGCC AAATTCCGGAAGCCTTCAAGTCAGGAGAGAACCCACAACTCCTTTCCATCTTAGATTCGGTACGTGTGTATTTGGACCGA CTCATCCAAGCCCCTCCTTATATTGAGGAATTCTTTTTGGAAAACCTGTCCTTTGAAAACGATGAAGCCAAACAATTGGT GCTCGAAGGCAAAGGGAAGGAAGTGGTCGCAGAGTTTTACCGCATTGTCAAGGAGAGCTCACTTACCACTCCAGATGCCT ATAAGGAATCCATGGCAAAAGTGGGCGAAATCACGGGAGAAAAGGGACGAACTCTTTTTATGCCGATCCGAGCCATCACA ACTGGGAAATCCCATGGATTGGAGCTTCCGATTCTCTTTAGCCTACTCGGTCAGGAAAAGATGGTCAAACGGATGGAACA ATTGGCGGGCATCTTAGGCATTTCGCTTAGGTAA
Upstream 100 bases:
>100_bases TATACTTTGTTCCTCCCTATACCAATGGTCTCACAACCAAAACTAAGGAACCATTTGGTTATAAACGAATGGGAGATTTT TTACTCAAAGAGGAAATGAA
Downstream 100 bases:
>100_bases ATTTTTTACAGATTCGTTCGGTTTTCGGGTATTTTTGACTTTTTTTCTCACTTCGCATCGTGTAATATGATGAGAGAGAG GAAAAGGCGGCCATTGACAG
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS
Number of amino acids: Translated: 517; Mature: 516
Protein sequence:
>517_residues MTEVRTRFAPSPSGFLHVGGARTALFNYLYAKAKKGKFLLRIEDTDQDRSTEASFKIILESLKWLGMEWDEGPGVGGPNG PYTQSERIHIYKEYTDKLIQEKKAYRCFCTAEELEGKKKQADAMGIPYIYDGKCSDLSDAEIGSQLEKKIPFTVRFKTPH KIVIVDDMIQGKVKFESKLIGDFIIVKSDGFPSYNYAVVIDDALMKITHVIRGVGHLSNTPRQILIFEAFGFPLPRFAHA SEIVGTDGKKLSKRAGATSVLAFRDLGYSSETMRNYMALLGWTSPDGKEYMSDEELCSVFDVERCSKSPATFDVFKKLKE EEKESVDFNKLTILGLAEYLNPKSKLNWMSNKYIRDTKIETLGKALEPFLKDCQIPEAFKSGENPQLLSILDSVRVYLDR LIQAPPYIEEFFLENLSFENDEAKQLVLEGKGKEVVAEFYRIVKESSLTTPDAYKESMAKVGEITGEKGRTLFMPIRAIT TGKSHGLELPILFSLLGQEKMVKRMEQLAGILGISLR
Sequences:
>Translated_517_residues MTEVRTRFAPSPSGFLHVGGARTALFNYLYAKAKKGKFLLRIEDTDQDRSTEASFKIILESLKWLGMEWDEGPGVGGPNG PYTQSERIHIYKEYTDKLIQEKKAYRCFCTAEELEGKKKQADAMGIPYIYDGKCSDLSDAEIGSQLEKKIPFTVRFKTPH KIVIVDDMIQGKVKFESKLIGDFIIVKSDGFPSYNYAVVIDDALMKITHVIRGVGHLSNTPRQILIFEAFGFPLPRFAHA SEIVGTDGKKLSKRAGATSVLAFRDLGYSSETMRNYMALLGWTSPDGKEYMSDEELCSVFDVERCSKSPATFDVFKKLKE EEKESVDFNKLTILGLAEYLNPKSKLNWMSNKYIRDTKIETLGKALEPFLKDCQIPEAFKSGENPQLLSILDSVRVYLDR LIQAPPYIEEFFLENLSFENDEAKQLVLEGKGKEVVAEFYRIVKESSLTTPDAYKESMAKVGEITGEKGRTLFMPIRAIT TGKSHGLELPILFSLLGQEKMVKRMEQLAGILGISLR >Mature_516_residues TEVRTRFAPSPSGFLHVGGARTALFNYLYAKAKKGKFLLRIEDTDQDRSTEASFKIILESLKWLGMEWDEGPGVGGPNGP YTQSERIHIYKEYTDKLIQEKKAYRCFCTAEELEGKKKQADAMGIPYIYDGKCSDLSDAEIGSQLEKKIPFTVRFKTPHK IVIVDDMIQGKVKFESKLIGDFIIVKSDGFPSYNYAVVIDDALMKITHVIRGVGHLSNTPRQILIFEAFGFPLPRFAHAS EIVGTDGKKLSKRAGATSVLAFRDLGYSSETMRNYMALLGWTSPDGKEYMSDEELCSVFDVERCSKSPATFDVFKKLKEE EKESVDFNKLTILGLAEYLNPKSKLNWMSNKYIRDTKIETLGKALEPFLKDCQIPEAFKSGENPQLLSILDSVRVYLDRL IQAPPYIEEFFLENLSFENDEAKQLVLEGKGKEVVAEFYRIVKESSLTTPDAYKESMAKVGEITGEKGRTLFMPIRAITT GKSHGLELPILFSLLGQEKMVKRMEQLAGILGISLR
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI134288884, Length=331, Percent_Identity=37.1601208459215, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI62241042, Length=256, Percent_Identity=26.953125, Blast_Score=81, Evalue=3e-15, Organism=Escherichia coli, GI1788743, Length=511, Percent_Identity=34.2465753424658, Blast_Score=296, Evalue=2e-81, Organism=Escherichia coli, GI226510925, Length=260, Percent_Identity=33.4615384615385, Blast_Score=140, Evalue=2e-34, Organism=Escherichia coli, GI1786895, Length=342, Percent_Identity=22.2222222222222, Blast_Score=68, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71993394, Length=335, Percent_Identity=38.8059701492537, Blast_Score=215, Evalue=4e-56, Organism=Saccharomyces cerevisiae, GI6324540, Length=323, Percent_Identity=43.0340557275542, Blast_Score=253, Evalue=4e-68, Organism=Saccharomyces cerevisiae, GI6321192, Length=244, Percent_Identity=27.4590163934426, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6324742, Length=114, Percent_Identity=34.2105263157895, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24665321, Length=317, Percent_Identity=42.9022082018927, Blast_Score=270, Evalue=3e-72,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE_LEPBA (B0SCM4)
Other databases:
- EMBL: CP000777 - RefSeq: YP_001961764.1 - ProteinModelPortal: B0SCM4 - SMR: B0SCM4 - GeneID: 6389675 - GenomeReviews: CP000777_GR - KEGG: lbf:LBF_0654 - HOGENOM: HBG628189 - OMA: MANKIRV - ProtClustDB: PRK01406 - BioCyc: LBIF355278:LBF_0654-MONOMER - GO: GO:0005737 - HAMAP: MF_00022_B - InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:3.40.50.620 - Gene3D: G3DSA:1.10.10.350 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00464
Pfam domain/function: PF00749 tRNA-synt_1c; SSF48163 tRNA-synt_bind
EC number: =6.1.1.17
Molecular weight: Translated: 58315; Mature: 58184
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: PS00178 AA_TRNA_LIGASE_I; PS00626 RCC1_2
Important sites: BINDING 253-253
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEVRTRFAPSPSGFLHVGGARTALFNYLYAKAKKGKFLLRIEDTDQDRSTEASFKIILE CCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHH SLKWLGMEWDEGPGVGGPNGPYTQSERIHIYKEYTDKLIQEKKAYRCFCTAEELEGKKKQ HHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHEEEEEHHHHCCCHHH ADAMGIPYIYDGKCSDLSDAEIGSQLEKKIPFTVRFKTPHKIVIVDDMIQGKVKFESKLI HCCCCCCEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCHHHHHEEE GDFIIVKSDGFPSYNYAVVIDDALMKITHVIRGVGHLSNTPRQILIFEAFGFPLPRFAHA CCEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHH SEIVGTDGKKLSKRAGATSVLAFRDLGYSSETMRNYMALLGWTSPDGKEYMSDEELCSVF HHHHCCCCHHHHHHCCCHHEEHHHHCCCCHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHH DVERCSKSPATFDVFKKLKEEEKESVDFNKLTILGLAEYLNPKSKLNWMSNKYIRDTKIE HHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHH TLGKALEPFLKDCQIPEAFKSGENPQLLSILDSVRVYLDRLIQAPPYIEEFFLENLSFEN HHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC DEAKQLVLEGKGKEVVAEFYRIVKESSLTTPDAYKESMAKVGEITGEKGRTLFMPIRAIT CHHHHHEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEE TGKSHGLELPILFSLLGQEKMVKRMEQLAGILGISLR CCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TEVRTRFAPSPSGFLHVGGARTALFNYLYAKAKKGKFLLRIEDTDQDRSTEASFKIILE CCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHH SLKWLGMEWDEGPGVGGPNGPYTQSERIHIYKEYTDKLIQEKKAYRCFCTAEELEGKKKQ HHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHEEEEEHHHHCCCHHH ADAMGIPYIYDGKCSDLSDAEIGSQLEKKIPFTVRFKTPHKIVIVDDMIQGKVKFESKLI HCCCCCCEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCHHHHHEEE GDFIIVKSDGFPSYNYAVVIDDALMKITHVIRGVGHLSNTPRQILIFEAFGFPLPRFAHA CCEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHH SEIVGTDGKKLSKRAGATSVLAFRDLGYSSETMRNYMALLGWTSPDGKEYMSDEELCSVF HHHHCCCCHHHHHHCCCHHEEHHHHCCCCHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHH DVERCSKSPATFDVFKKLKEEEKESVDFNKLTILGLAEYLNPKSKLNWMSNKYIRDTKIE HHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHH TLGKALEPFLKDCQIPEAFKSGENPQLLSILDSVRVYLDRLIQAPPYIEEFFLENLSFEN HHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC DEAKQLVLEGKGKEVVAEFYRIVKESSLTTPDAYKESMAKVGEITGEKGRTLFMPIRAIT CHHHHHEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEE TGKSHGLELPILFSLLGQEKMVKRMEQLAGILGISLR CCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA