Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

Click here to switch to the map view.

The map label for this gene is 183220090

Identifier: 183220090

GI number: 183220090

Start: 683846

End: 684718

Strand: Reverse

Name: 183220090

Synonym: LEPBI_I0678

Alternate gene names: NA

Gene position: 684718-683846 (Counterclockwise)

Preceding gene: 183220094

Following gene: 183220089

Centisome position: 19.02

GC content: 35.97

Gene sequence:

>873_bases
ATGTCCCCACAAACTCAAGAATACTCCCGTTTTCATTGGCTTATCTGGTTCTTGATTTTTTTTTCTGGATGGAGTTGCCA
AAACCTAAATTCTCTCCTTTCGAGAGACCCAAAGTCTGAAATCCCAGCCTCAATTCTCTTTCTCAAATCACCAAGAAAAA
TGAATACGACTTTCTTTCGTGATGGCTCTGCGCACTACCGATGTATCCAATGGGAACCAGGAAAATCCACGGGATATGTG
GAAAAAATCGAGTTTAGTTTCATTGCGTATGATCCAAGTTTTATCACAAAAATCAATTCTGAGTTTGGGAATGAAACAGT
AGAATCCTACAAACTCATTTGGAACCGAAAGGTTGGAAAATTCCAAAGAGATAAGTCTGAAAAAAAAATCATCTTTGTCT
ACAAAGACTCGTTTTTTAAAGAAACCAAAGGTGATACAATTGAATCACTCCTTCAAAATCAAATTGCATATAAAGAAAAC
AAATCATCCATTGATGAATTGGAAATATTTGAGTTGAGTGGCGATACAGCCACACTTCTGGAAGAAGGCAATCGTTCTGA
AATTGGTGGAGAAAATCGATGGTCTCACAATCTTGGATCTAATCAATTTTTCACTTCTTCGAGTACATACACTAAAATTA
ACAACCAAACAGTTGTTACAGAACATACTTCGACTCATTATGATTACCACCAATTGAGTTTTGAGTGGAACGAAACAGAA
CCCGACAAACTGTTTTTCAAACCCATTTTTAAAGAAAACAACCTACAATTATACTTTGTTCCTCCCTATACCAATGGTCT
CACAACCAAAACTAAGGAACCATTTGGTTATAAACGAATGGGAGATTTTTTACTCAAAGAGGAAATGAAATGA

Upstream 100 bases:

>100_bases
TACTGTTCTTCGTTCTTCATGGTTCCAAATGACACAGGGGTGCGATGAATTGACTTGTCAAGCGGTTTTCCCTTTTTAGA
CTGGCGATACGCACCTATCT

Downstream 100 bases:

>100_bases
CAGAAGTTCGTACCCGTTTTGCCCCATCCCCCTCCGGATTCCTTCATGTAGGAGGAGCAAGGACTGCCTTATTCAATTAT
TTGTATGCCAAGGCCAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MSPQTQEYSRFHWLIWFLIFFSGWSCQNLNSLLSRDPKSEIPASILFLKSPRKMNTTFFRDGSAHYRCIQWEPGKSTGYV
EKIEFSFIAYDPSFITKINSEFGNETVESYKLIWNRKVGKFQRDKSEKKIIFVYKDSFFKETKGDTIESLLQNQIAYKEN
KSSIDELEIFELSGDTATLLEEGNRSEIGGENRWSHNLGSNQFFTSSSTYTKINNQTVVTEHTSTHYDYHQLSFEWNETE
PDKLFFKPIFKENNLQLYFVPPYTNGLTTKTKEPFGYKRMGDFLLKEEMK

Sequences:

>Translated_290_residues
MSPQTQEYSRFHWLIWFLIFFSGWSCQNLNSLLSRDPKSEIPASILFLKSPRKMNTTFFRDGSAHYRCIQWEPGKSTGYV
EKIEFSFIAYDPSFITKINSEFGNETVESYKLIWNRKVGKFQRDKSEKKIIFVYKDSFFKETKGDTIESLLQNQIAYKEN
KSSIDELEIFELSGDTATLLEEGNRSEIGGENRWSHNLGSNQFFTSSSTYTKINNQTVVTEHTSTHYDYHQLSFEWNETE
PDKLFFKPIFKENNLQLYFVPPYTNGLTTKTKEPFGYKRMGDFLLKEEMK
>Mature_289_residues
SPQTQEYSRFHWLIWFLIFFSGWSCQNLNSLLSRDPKSEIPASILFLKSPRKMNTTFFRDGSAHYRCIQWEPGKSTGYVE
KIEFSFIAYDPSFITKINSEFGNETVESYKLIWNRKVGKFQRDKSEKKIIFVYKDSFFKETKGDTIESLLQNQIAYKENK
SSIDELEIFELSGDTATLLEEGNRSEIGGENRWSHNLGSNQFFTSSSTYTKINNQTVVTEHTSTHYDYHQLSFEWNETEP
DKLFFKPIFKENNLQLYFVPPYTNGLTTKTKEPFGYKRMGDFLLKEEMK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34149; Mature: 34017

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPQTQEYSRFHWLIWFLIFFSGWSCQNLNSLLSRDPKSEIPASILFLKSPRKMNTTFFR
CCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHCCEEEEEEECCCCCCCEEEE
DGSAHYRCIQWEPGKSTGYVEKIEFSFIAYDPSFITKINSEFGNETVESYKLIWNRKVGK
CCCCCEEEEEECCCCCCCCEEEEEEEEEEECCHHHHHHHHHHCHHHHHHHHHHHHCCCCC
FQRDKSEKKIIFVYKDSFFKETKGDTIESLLQNQIAYKENKSSIDELEIFELSGDTATLL
HHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEC
EEGNRSEIGGENRWSHNLGSNQFFTSSSTYTKINNQTVVTEHTSTHYDYHQLSFEWNETE
CCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCEEEEEECCCCCCEEEEEEEEECCCC
PDKLFFKPIFKENNLQLYFVPPYTNGLTTKTKEPFGYKRMGDFLLKEEMK
CCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SPQTQEYSRFHWLIWFLIFFSGWSCQNLNSLLSRDPKSEIPASILFLKSPRKMNTTFFR
CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHCCEEEEEEECCCCCCCEEEE
DGSAHYRCIQWEPGKSTGYVEKIEFSFIAYDPSFITKINSEFGNETVESYKLIWNRKVGK
CCCCCEEEEEECCCCCCCCEEEEEEEEEEECCHHHHHHHHHHCHHHHHHHHHHHHCCCCC
FQRDKSEKKIIFVYKDSFFKETKGDTIESLLQNQIAYKENKSSIDELEIFELSGDTATLL
HHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEC
EEGNRSEIGGENRWSHNLGSNQFFTSSSTYTKINNQTVVTEHTSTHYDYHQLSFEWNETE
CCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCEEEEEECCCCCCEEEEEEEEECCCC
PDKLFFKPIFKENNLQLYFVPPYTNGLTTKTKEPFGYKRMGDFLLKEEMK
CCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA