| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220078
Identifier: 183220078
GI number: 183220078
Start: 669578
End: 670567
Strand: Reverse
Name: 183220078
Synonym: LEPBI_I0665
Alternate gene names: NA
Gene position: 670567-669578 (Counterclockwise)
Preceding gene: 183220080
Following gene: 183220077
Centisome position: 18.63
GC content: 35.76
Gene sequence:
>990_bases ATGGCTTCTTTTGAAGATTTTCCCATGATCGAAGTGAAAAAAATGAACGAAACGGAAGTTCGACTTTTCAGTTTATTGTT CAATCTTTTGCGAGAACCAAAAGGAATTAGTTTCCAGAAGTTCCGAAACATCATGCCCCGTTTTTATAAAAACGAAGACA TTGAGTCGGATCGTAAAAAACTCTATAGAGATTTAAACCAACTGAAAAGCCTTGGATTCAATATCAAAGTGGCACAGTAC GGATACCAATCTGAAGATTTTTTTCCCTATTACATTCAAAAAGAATCCATCGATCGATCCTTAAAATTTTCCAAAGAAGA ATTGGAACACTTATCCAAAACTCTTTTTGCTACTGAATTCACGAAAGATTTGATGAGTTTGTCTCAGAAACTGTTTTCCT TTCATTTGGATTTGATTCCCAATCTTTCCAAACTTCCCGTATCCACTGAAGGCGAAGATATGGTGGATACAGGAAACACA GAAAAAATTTTACAAGCCATCAAAGACAAACGTGCCATCACAATCCTTTACGGATACGAAGAGAAAGAGAGGACAATCGA ACCCTATCGTTTGATTCGAAAAAATACAACCGACTTTTATGTGTTAGCTTATGATAGAAGTAAAAAGTCCTTACGTAGAT TCATCCTTCCTAAAATTTCAGTGAAAAAAGAAACCAAAGAAGAGTTTTTTTCGAATGTCAAAATTTCCGATGATGATTTA AATTTTCATCCCCTTTCAATCAAAACACACCCCGAAAAAGAAATCTCCTTCCAAATCCATCCTGAGTACGAGGATCGGTG GAAAACTTTTTTGGAAGGTGCCAAATATGAAACCATTCAAAACCAATACAAAGTGTTGACGACGAACCAAAATGCACTGT TTCAATTTTTTGTGATTTTACCAGAAGCATTGGTGGAATGCCTTCCTGAATGGAAGGAATCATTTGTCCGACACTTAAAA GATTGGGAACATTTATACCAACTCGTATGA
Upstream 100 bases:
>100_bases AATACAAAAGGCAAAGGATAAGGCCGATGGAACGCATTCTTTTCCAATTTTTTTCATTTTCTACTTTTCGGAATCAAAAA AACAAACTTTTTGGGAAGAT
Downstream 100 bases:
>100_bases TAGCACTTTGACTCCCGTAACCAAATCTTTATACTTACAATTCTTAAGATGCCAAAATGCATTCCATCTGATACGAGATG GAGTTGTTCAAAAACCATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MASFEDFPMIEVKKMNETEVRLFSLLFNLLREPKGISFQKFRNIMPRFYKNEDIESDRKKLYRDLNQLKSLGFNIKVAQY GYQSEDFFPYYIQKESIDRSLKFSKEELEHLSKTLFATEFTKDLMSLSQKLFSFHLDLIPNLSKLPVSTEGEDMVDTGNT EKILQAIKDKRAITILYGYEEKERTIEPYRLIRKNTTDFYVLAYDRSKKSLRRFILPKISVKKETKEEFFSNVKISDDDL NFHPLSIKTHPEKEISFQIHPEYEDRWKTFLEGAKYETIQNQYKVLTTNQNALFQFFVILPEALVECLPEWKESFVRHLK DWEHLYQLV
Sequences:
>Translated_329_residues MASFEDFPMIEVKKMNETEVRLFSLLFNLLREPKGISFQKFRNIMPRFYKNEDIESDRKKLYRDLNQLKSLGFNIKVAQY GYQSEDFFPYYIQKESIDRSLKFSKEELEHLSKTLFATEFTKDLMSLSQKLFSFHLDLIPNLSKLPVSTEGEDMVDTGNT EKILQAIKDKRAITILYGYEEKERTIEPYRLIRKNTTDFYVLAYDRSKKSLRRFILPKISVKKETKEEFFSNVKISDDDL NFHPLSIKTHPEKEISFQIHPEYEDRWKTFLEGAKYETIQNQYKVLTTNQNALFQFFVILPEALVECLPEWKESFVRHLK DWEHLYQLV >Mature_328_residues ASFEDFPMIEVKKMNETEVRLFSLLFNLLREPKGISFQKFRNIMPRFYKNEDIESDRKKLYRDLNQLKSLGFNIKVAQYG YQSEDFFPYYIQKESIDRSLKFSKEELEHLSKTLFATEFTKDLMSLSQKLFSFHLDLIPNLSKLPVSTEGEDMVDTGNTE KILQAIKDKRAITILYGYEEKERTIEPYRLIRKNTTDFYVLAYDRSKKSLRRFILPKISVKKETKEEFFSNVKISDDDLN FHPLSIKTHPEKEISFQIHPEYEDRWKTFLEGAKYETIQNQYKVLTTNQNALFQFFVILPEALVECLPEWKESFVRHLKD WEHLYQLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39400; Mature: 39268
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASFEDFPMIEVKKMNETEVRLFSLLFNLLREPKGISFQKFRNIMPRFYKNEDIESDRKK CCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHH LYRDLNQLKSLGFNIKVAQYGYQSEDFFPYYIQKESIDRSLKFSKEELEHLSKTLFATEF HHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHH TKDLMSLSQKLFSFHLDLIPNLSKLPVSTEGEDMVDTGNTEKILQAIKDKRAITILYGYE HHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCC EKERTIEPYRLIRKNTTDFYVLAYDRSKKSLRRFILPKISVKKETKEEFFSNVKISDDDL HHHHCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCC NFHPLSIKTHPEKEISFQIHPEYEDRWKTFLEGAKYETIQNQYKVLTTNQNALFQFFVIL CEEEEEEECCCCCCCEEEECCCHHHHHHHHHCCCHHHHHHCCEEEEEECCHHHHHHHHHH PEALVECLPEWKESFVRHLKDWEHLYQLV HHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ASFEDFPMIEVKKMNETEVRLFSLLFNLLREPKGISFQKFRNIMPRFYKNEDIESDRKK CCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHH LYRDLNQLKSLGFNIKVAQYGYQSEDFFPYYIQKESIDRSLKFSKEELEHLSKTLFATEF HHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHH TKDLMSLSQKLFSFHLDLIPNLSKLPVSTEGEDMVDTGNTEKILQAIKDKRAITILYGYE HHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCC EKERTIEPYRLIRKNTTDFYVLAYDRSKKSLRRFILPKISVKKETKEEFFSNVKISDDDL HHHHCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCC NFHPLSIKTHPEKEISFQIHPEYEDRWKTFLEGAKYETIQNQYKVLTTNQNALFQFFVIL CEEEEEEECCCCCCCEEEECCCHHHHHHHHHCCCHHHHHHCCEEEEEECCHHHHHHHHHH PEALVECLPEWKESFVRHLKDWEHLYQLV HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA