| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220077
Identifier: 183220077
GI number: 183220077
Start: 668080
End: 669570
Strand: Reverse
Name: 183220077
Synonym: LEPBI_I0664
Alternate gene names: NA
Gene position: 669570-668080 (Counterclockwise)
Preceding gene: 183220078
Following gene: 183220076
Centisome position: 18.6
GC content: 39.77
Gene sequence:
>1491_bases TTGACTCCCGTAACCAAATCTTTATACTTACAATTCTTAAGATGCCAAAATGCATTCCATCTGATACGAGATGGAGTTGT TCAAAAACCATCCACCGCATCCTTTGGTGGGTATTTGGAATGGGGAGATTATCTTTCTCTATGTAGAAGCCAATTTCCAA ACACTCCGATTGTGGAAAAATCGCAGAACCGAGAAGAAAGTTTTTTAGCGTCTGAAGTTTATATCAAACAACAAATGTCC CATTTTGGATCCCATCTGCGTTTCCAAAATTTTGTTTGTAGTGTTGAACTCATTGAATATGACAAAGAGAGAGATGGTTG GATTTTATGGGACTTTCGGCCCATTGGTTCCATCAAACAAGACATCCTACGATCGTTTTTCTTTTACAAAAAAATTGCGG AAGGCATGGGACTTCGGGTACATGGATTCAAACTCATCCGCATCCAAACCAAATTTGTTTACAAAGGTGGCCCCATCCTT CCAGAAGAATTCCTTCTCATCGATGACCTAACATCGCGCATGGAATCGGAATCAGGAACTCGGGAAGAAGAATGGAACTC ATTCCAAGAAGTGGAAAAAGAGGCAGAAGGCAAATCGGTTCTTTATTCCTTTTTGGAAACAAAACCCAGTTGTCGTTCTC TCAAAACTTGCCTTTCCCCTTCCCATTGTGCAAAAGGCAGAGAATCAGCCAAAGAGATCTTTGAATATAGAGATAGCTCC GAACTAGCAAAACAATGGTTTGCCTCTGGGTACAATTCGTACGATTCAGTTCCGGATACAGAACTCTCACCCATCCAAAA AATTCAAAAAGAGGCACATAGAACGGGAGAGGTTCATTTTAACAAGGAAACACTCTCCGAGTATCTTTCTAATGTGACAA AAACAGTTGCTTTTTTGGATTTTGAGTCGATCAACCCTTACCTCCCGATTTACCCAGAAACAAAACCCTTCCAACATATC CCATATTTATATTCACTTCACATTTGGGACCAGGAAACGGATACACTAACGCACACAACGTACATGCATGAGGATATAGG AACAGATCCGCGGAGCGCAGTTTTGTTCCACCTTCAAAAAGACCTACCAAGAGGCATTACGATCTTTTCATTTAATGATT TTTTTGAAAAATTGATCATCCAAGAATCGGCGAACGTTGTCCCAGAATACTTAGAATTTTGGGAATCAGTCAAATCGATG TTTATCGACCTTGCATTGCCGTTTAAAAAACTTTGGGTTTACCACCCAGGCCAGAATGGGAAGGCATCACTTAAGGAAAT CCTACCTTGTTTTAGCCAAGAAAGCCATTTTGGACTTACCATTCGCGAAGGACAGGATGCCAATTACCAATATTTGAGAT TGATAAAAAAGCAGGTGACAGCCGAAGAAAAAAAACGTGTCTTGGAGGATTTGATAGCTTACTGCAAATTAGATAGTTAC GGTTTGTTTTTAATCTATAGAATGTTACAAGAAAGATTATCGGTTATTTAA
Upstream 100 bases:
>100_bases TTACCAGAAGCATTGGTGGAATGCCTTCCTGAATGGAAGGAATCATTTGTCCGACACTTAAAAGATTGGGAACATTTATA CCAACTCGTATGATAGCACT
Downstream 100 bases:
>100_bases TGTTAGGTATCAAAAAATCAGTCGCACAACTTGTCTTTTCGTTACCTGAGAATTGGATCTCTGCTCTCACTCGAAAAAAC AATACCAATGAGTCCAATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MTPVTKSLYLQFLRCQNAFHLIRDGVVQKPSTASFGGYLEWGDYLSLCRSQFPNTPIVEKSQNREESFLASEVYIKQQMS HFGSHLRFQNFVCSVELIEYDKERDGWILWDFRPIGSIKQDILRSFFFYKKIAEGMGLRVHGFKLIRIQTKFVYKGGPIL PEEFLLIDDLTSRMESESGTREEEWNSFQEVEKEAEGKSVLYSFLETKPSCRSLKTCLSPSHCAKGRESAKEIFEYRDSS ELAKQWFASGYNSYDSVPDTELSPIQKIQKEAHRTGEVHFNKETLSEYLSNVTKTVAFLDFESINPYLPIYPETKPFQHI PYLYSLHIWDQETDTLTHTTYMHEDIGTDPRSAVLFHLQKDLPRGITIFSFNDFFEKLIIQESANVVPEYLEFWESVKSM FIDLALPFKKLWVYHPGQNGKASLKEILPCFSQESHFGLTIREGQDANYQYLRLIKKQVTAEEKKRVLEDLIAYCKLDSY GLFLIYRMLQERLSVI
Sequences:
>Translated_496_residues MTPVTKSLYLQFLRCQNAFHLIRDGVVQKPSTASFGGYLEWGDYLSLCRSQFPNTPIVEKSQNREESFLASEVYIKQQMS HFGSHLRFQNFVCSVELIEYDKERDGWILWDFRPIGSIKQDILRSFFFYKKIAEGMGLRVHGFKLIRIQTKFVYKGGPIL PEEFLLIDDLTSRMESESGTREEEWNSFQEVEKEAEGKSVLYSFLETKPSCRSLKTCLSPSHCAKGRESAKEIFEYRDSS ELAKQWFASGYNSYDSVPDTELSPIQKIQKEAHRTGEVHFNKETLSEYLSNVTKTVAFLDFESINPYLPIYPETKPFQHI PYLYSLHIWDQETDTLTHTTYMHEDIGTDPRSAVLFHLQKDLPRGITIFSFNDFFEKLIIQESANVVPEYLEFWESVKSM FIDLALPFKKLWVYHPGQNGKASLKEILPCFSQESHFGLTIREGQDANYQYLRLIKKQVTAEEKKRVLEDLIAYCKLDSY GLFLIYRMLQERLSVI >Mature_495_residues TPVTKSLYLQFLRCQNAFHLIRDGVVQKPSTASFGGYLEWGDYLSLCRSQFPNTPIVEKSQNREESFLASEVYIKQQMSH FGSHLRFQNFVCSVELIEYDKERDGWILWDFRPIGSIKQDILRSFFFYKKIAEGMGLRVHGFKLIRIQTKFVYKGGPILP EEFLLIDDLTSRMESESGTREEEWNSFQEVEKEAEGKSVLYSFLETKPSCRSLKTCLSPSHCAKGRESAKEIFEYRDSSE LAKQWFASGYNSYDSVPDTELSPIQKIQKEAHRTGEVHFNKETLSEYLSNVTKTVAFLDFESINPYLPIYPETKPFQHIP YLYSLHIWDQETDTLTHTTYMHEDIGTDPRSAVLFHLQKDLPRGITIFSFNDFFEKLIIQESANVVPEYLEFWESVKSMF IDLALPFKKLWVYHPGQNGKASLKEILPCFSQESHFGLTIREGQDANYQYLRLIKKQVTAEEKKRVLEDLIAYCKLDSYG LFLIYRMLQERLSVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57916; Mature: 57784
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPVTKSLYLQFLRCQNAFHLIRDGVVQKPSTASFGGYLEWGDYLSLCRSQFPNTPIVEK CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC SQNREESFLASEVYIKQQMSHFGSHLRFQNFVCSVELIEYDKERDGWILWDFRPIGSIKQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHEECCCCCCCEEEEECCCCCHHHH DILRSFFFYKKIAEGMGLRVHGFKLIRIQTKFVYKGGPILPEEFLLIDDLTSRMESESGT HHHHHHHHHHHHHHCCCCEEECEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC REEEWNSFQEVEKEAEGKSVLYSFLETKPSCRSLKTCLSPSHCAKGRESAKEIFEYRDSS CHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHCCHHHHHHHHHHCCHH ELAKQWFASGYNSYDSVPDTELSPIQKIQKEAHRTGEVHFNKETLSEYLSNVTKTVAFLD HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHEE FESINPYLPIYPETKPFQHIPYLYSLHIWDQETDTLTHTTYMHEDIGTDPRSAVLFHLQK HHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEHHHEEHHHCCCCHHHHHHHHHHH DLPRGITIFSFNDFFEKLIIQESANVVPEYLEFWESVKSMFIDLALPFKKLWVYHPGQNG CCCCCEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHEEECCCCCC KASLKEILPCFSQESHFGLTIREGQDANYQYLRLIKKQVTAEEKKRVLEDLIAYCKLDSY HHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GLFLIYRMLQERLSVI HHHHHHHHHHHHHCCC >Mature Secondary Structure TPVTKSLYLQFLRCQNAFHLIRDGVVQKPSTASFGGYLEWGDYLSLCRSQFPNTPIVEK CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC SQNREESFLASEVYIKQQMSHFGSHLRFQNFVCSVELIEYDKERDGWILWDFRPIGSIKQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHEECCCCCCCEEEEECCCCCHHHH DILRSFFFYKKIAEGMGLRVHGFKLIRIQTKFVYKGGPILPEEFLLIDDLTSRMESESGT HHHHHHHHHHHHHHCCCCEEECEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC REEEWNSFQEVEKEAEGKSVLYSFLETKPSCRSLKTCLSPSHCAKGRESAKEIFEYRDSS CHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHCCHHHHHHHHHHCCHH ELAKQWFASGYNSYDSVPDTELSPIQKIQKEAHRTGEVHFNKETLSEYLSNVTKTVAFLD HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHEE FESINPYLPIYPETKPFQHIPYLYSLHIWDQETDTLTHTTYMHEDIGTDPRSAVLFHLQK HHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEHHHEEHHHCCCCHHHHHHHHHHH DLPRGITIFSFNDFFEKLIIQESANVVPEYLEFWESVKSMFIDLALPFKKLWVYHPGQNG CCCCCEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHEEECCCCCC KASLKEILPCFSQESHFGLTIREGQDANYQYLRLIKKQVTAEEKKRVLEDLIAYCKLDSY HHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GLFLIYRMLQERLSVI HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA