| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219963
Identifier: 183219963
GI number: 183219963
Start: 541873
End: 543774
Strand: Reverse
Name: 183219963
Synonym: LEPBI_I0545
Alternate gene names: NA
Gene position: 543774-541873 (Counterclockwise)
Preceding gene: 183219964
Following gene: 183219962
Centisome position: 15.11
GC content: 34.02
Gene sequence:
>1902_bases ATGAATTTAGATAAACGAGATCGATTTGTTCTCATTGGCCTGACAAGCATTGCAATCTTCTTTAGTATTCTTTTTTATTT AGATTTAAATCGTAAAATAGACATTGGAAATCGTGAAGTTGTTGGAACAATTTTTTTTAAAAACAATATAGTTCAAAGAA AATTTGAAGATGAGGTGATCTGGGAAAAATTAGAAAACAATAGCCCTCTCATCAATAAAGACACAATCCGATCAGAAGCC TATTCCGATGCAATCATTCGTCTTAAGGATGGAACTGAAATCAATATTGATGAAAATTCAATGTTTAACTTAGATTTAAC CGGTGAAGAACCAAACTTAGAATTTTCAGAAGGATCCTTACAAGTCAAAAAGAACGATTCCAACACCAATCAAATCAAAA TCACAAGTTCTGGTAGTGAAATCAATGTAAATTCAGGAAATGTTAAAATTGAAAAAGCAAAGGACCAAGAACTGAATCTT TTTGTTGAAAAAGGAAAAACAACGGTCAAACAAAATGGTAAATCCTTGGCGGTAGAACAAGGGAAAAAAGCAGAATTCAA AAAGAGCGGAATTGAAATCACTAAGATACCCATTGTACTCAGTTCTCCCCAATCTCAGAAATTATTTTATGCTGAACCCA ACGAAGTAAATGTTACTTTTCAGTGGAAAATCGAATCGGGATTTGAATCTCCTCTACTCGAAATTTCTCGATCTCCCAAT TTTCAGTTAATTTATTTTTCGCAAACAATCCAAGGCAACCAAACAACAGTCAGCCTAAAAGAGGGCACATTTTATTGGCG AGTCAAAGTCAAAAATCAAAAAACCAAAGATGTCGCATCCAGTGAGACAAATAAATTTTTTGTCTCAAAACTGGAGCCGT TTTTAGGCGAGTCACCAAACAATGGTGCAGTGATTTCATTTGTTCAGATTTTACCTTTAGTGACTGTCTCTTGGAGTAAA CTCAATACAACTAATTTATACCAATTTTACCTATCAGACTCGAATCAATTTCAGAAACCTCTCAAACGGATTGAGACGGT AGCAAACCAAATTTCTTTCGATGACTTAAAAGAAGGAACTTATTATTGGAAAGTCATCGCTAAATCATCTTTCCCAGACA CAAAAGATCGGGAAACGAAAGTATATTCTTTTACAATCAAAAAACAAAATTCAATACCTTCTCCCAAATGGCAAAGACCA AATCCGGAATCAGAAATTAGTGTAGAAGAAATCAAACACAACCAAGCCATTCTGATTTGGGAAGGAAATTCAGAGATCCA ATCTTATACCGTAAAAATTTCAAAAGATGCAAAACTTACAAATCCTATTGCAAAAATCGAAACTACTTCGAATTTTTTAG TACCAGATTGGAATCTTTTGGGGCACGGACATTTTTTTGCTACGATTACTGGAAAAACAAAAGATGGAAAGGAAACCGAA CCATCAAATTCACTTAGTTTTTCAATCGTAGAACAAAAGAAAAAAACTGAAGTGGCTTCGGTGCTTGAGGATAACAAATC TCAACCAATCCAAGAACCAAAACTAGAAATACTTTCACCTAACGGAACTGTGATTCAAATGAAAGGCAAATCAAGTTTGG ACTTCCATTGGAAGATGAGTGGTTCTACCGCAGACAGATTCGATTTAGTGTTATACCAACATTTCCCAGATAAAAAAGTT GCGATTTATAAAGTGAGCACCAAAGACACATCATACCAATTAAAAGATTTAAGTATCCTCGATGAGGGAAGTTTTTCATG GGATTTGAGTGTATATAAGGATTCCAATTTTCTTCTGTCTCGAAAGGGAAATTTCATTTTGGCCTTGGATCAGTTAAAAT CATTAAAACCAACAGACATCGAATTTATATCACCGAAACGTTTGTATAAAGAAAAAAAATGA
Upstream 100 bases:
>100_bases ATGCCGTTCTTGGCAAAAAATCAGACCCGAATGCTCCGAAAAATCTATCCGAGTTACAAAAGTTAGTTGGAATAGAAATA GCAGCTAAAAAGGCAAAAAG
Downstream 100 bases:
>100_bases ATCGATCCATTTACAAAACATCCATTTTTATATTGCTAGTGGTGACATCTTTGTTTGCAGAAGAAGGAACCAAACTCATC GCATGGAAACCCATCCCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 633; Mature: 633
Protein sequence:
>633_residues MNLDKRDRFVLIGLTSIAIFFSILFYLDLNRKIDIGNREVVGTIFFKNNIVQRKFEDEVIWEKLENNSPLINKDTIRSEA YSDAIIRLKDGTEINIDENSMFNLDLTGEEPNLEFSEGSLQVKKNDSNTNQIKITSSGSEINVNSGNVKIEKAKDQELNL FVEKGKTTVKQNGKSLAVEQGKKAEFKKSGIEITKIPIVLSSPQSQKLFYAEPNEVNVTFQWKIESGFESPLLEISRSPN FQLIYFSQTIQGNQTTVSLKEGTFYWRVKVKNQKTKDVASSETNKFFVSKLEPFLGESPNNGAVISFVQILPLVTVSWSK LNTTNLYQFYLSDSNQFQKPLKRIETVANQISFDDLKEGTYYWKVIAKSSFPDTKDRETKVYSFTIKKQNSIPSPKWQRP NPESEISVEEIKHNQAILIWEGNSEIQSYTVKISKDAKLTNPIAKIETTSNFLVPDWNLLGHGHFFATITGKTKDGKETE PSNSLSFSIVEQKKKTEVASVLEDNKSQPIQEPKLEILSPNGTVIQMKGKSSLDFHWKMSGSTADRFDLVLYQHFPDKKV AIYKVSTKDTSYQLKDLSILDEGSFSWDLSVYKDSNFLLSRKGNFILALDQLKSLKPTDIEFISPKRLYKEKK
Sequences:
>Translated_633_residues MNLDKRDRFVLIGLTSIAIFFSILFYLDLNRKIDIGNREVVGTIFFKNNIVQRKFEDEVIWEKLENNSPLINKDTIRSEA YSDAIIRLKDGTEINIDENSMFNLDLTGEEPNLEFSEGSLQVKKNDSNTNQIKITSSGSEINVNSGNVKIEKAKDQELNL FVEKGKTTVKQNGKSLAVEQGKKAEFKKSGIEITKIPIVLSSPQSQKLFYAEPNEVNVTFQWKIESGFESPLLEISRSPN FQLIYFSQTIQGNQTTVSLKEGTFYWRVKVKNQKTKDVASSETNKFFVSKLEPFLGESPNNGAVISFVQILPLVTVSWSK LNTTNLYQFYLSDSNQFQKPLKRIETVANQISFDDLKEGTYYWKVIAKSSFPDTKDRETKVYSFTIKKQNSIPSPKWQRP NPESEISVEEIKHNQAILIWEGNSEIQSYTVKISKDAKLTNPIAKIETTSNFLVPDWNLLGHGHFFATITGKTKDGKETE PSNSLSFSIVEQKKKTEVASVLEDNKSQPIQEPKLEILSPNGTVIQMKGKSSLDFHWKMSGSTADRFDLVLYQHFPDKKV AIYKVSTKDTSYQLKDLSILDEGSFSWDLSVYKDSNFLLSRKGNFILALDQLKSLKPTDIEFISPKRLYKEKK >Mature_633_residues MNLDKRDRFVLIGLTSIAIFFSILFYLDLNRKIDIGNREVVGTIFFKNNIVQRKFEDEVIWEKLENNSPLINKDTIRSEA YSDAIIRLKDGTEINIDENSMFNLDLTGEEPNLEFSEGSLQVKKNDSNTNQIKITSSGSEINVNSGNVKIEKAKDQELNL FVEKGKTTVKQNGKSLAVEQGKKAEFKKSGIEITKIPIVLSSPQSQKLFYAEPNEVNVTFQWKIESGFESPLLEISRSPN FQLIYFSQTIQGNQTTVSLKEGTFYWRVKVKNQKTKDVASSETNKFFVSKLEPFLGESPNNGAVISFVQILPLVTVSWSK LNTTNLYQFYLSDSNQFQKPLKRIETVANQISFDDLKEGTYYWKVIAKSSFPDTKDRETKVYSFTIKKQNSIPSPKWQRP NPESEISVEEIKHNQAILIWEGNSEIQSYTVKISKDAKLTNPIAKIETTSNFLVPDWNLLGHGHFFATITGKTKDGKETE PSNSLSFSIVEQKKKTEVASVLEDNKSQPIQEPKLEILSPNGTVIQMKGKSSLDFHWKMSGSTADRFDLVLYQHFPDKKV AIYKVSTKDTSYQLKDLSILDEGSFSWDLSVYKDSNFLLSRKGNFILALDQLKSLKPTDIEFISPKRLYKEKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006860 [H]
Pfam domain/function: PF04773 FecR [H]
EC number: NA
Molecular weight: Translated: 72180; Mature: 72180
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLDKRDRFVLIGLTSIAIFFSILFYLDLNRKIDIGNREVVGTIFFKNNIVQRKFEDEVI CCCCCCCCEEEEEHHHHHHHHHHHHHEECCCEEECCCCEEEEEEEEECCCHHHHHHHHHH WEKLENNSPLINKDTIRSEAYSDAIIRLKDGTEINIDENSMFNLDLTGEEPNLEFSEGSL HHHHCCCCCCCCHHHHHHHCCCCEEEEEECCCEEEECCCCEEEEEECCCCCCCEECCCEE QVKKNDSNTNQIKITSSGSEINVNSGNVKIEKAKDQELNLFVEKGKTTVKQNGKSLAVEQ EEEECCCCCCEEEEEECCCEEEECCCCEEEEECCCCCEEEEEECCCEEECCCCCEEEECC GKKAEFKKSGIEITKIPIVLSSPQSQKLFYAEPNEVNVTFQWKIESGFESPLLEISRSPN CCCCHHHHCCCEEEEEEEEEECCCCCEEEEECCCEEEEEEEEEECCCCCCCHHHHCCCCC FQLIYFSQTIQGNQTTVSLKEGTFYWRVKVKNQKTKDVASSETNKFFVSKLEPFLGESPN EEEEEEEEECCCCEEEEEEECCEEEEEEEECCCCCCCHHCCCCCEEEHHHHHHHHCCCCC NGAVISFVQILPLVTVSWSKLNTTNLYQFYLSDSNQFQKPLKRIETVANQISFDDLKEGT CCEEEEHHHHHHHHEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHCCCE YYWKVIAKSSFPDTKDRETKVYSFTIKKQNSIPSPKWQRPNPESEISVEEIKHNQAILIW EEEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCEEHHHCCCCCEEEEE EGNSEIQSYTVKISKDAKLTNPIAKIETTSNFLVPDWNLLGHGHFFATITGKTKDGKETE CCCCCEEEEEEEEECCCCCCCCEEEEECCCCEECCCCEEEECCEEEEEEECCCCCCCCCC PSNSLSFSIVEQKKKTEVASVLEDNKSQPIQEPKLEILSPNGTVIQMKGKSSLDFHWKMS CCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEECCCCCCEEEEEEC GSTADRFDLVLYQHFPDKKVAIYKVSTKDTSYQLKDLSILDEGSFSWDLSVYKDSNFLLS CCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEEEECCCCEEEEEEEECCCEEEE RKGNFILALDQLKSLKPTDIEFISPKRLYKEKK ECCCEEEEEHHHCCCCCCCEEEECCHHHHCCCC >Mature Secondary Structure MNLDKRDRFVLIGLTSIAIFFSILFYLDLNRKIDIGNREVVGTIFFKNNIVQRKFEDEVI CCCCCCCCEEEEEHHHHHHHHHHHHHEECCCEEECCCCEEEEEEEEECCCHHHHHHHHHH WEKLENNSPLINKDTIRSEAYSDAIIRLKDGTEINIDENSMFNLDLTGEEPNLEFSEGSL HHHHCCCCCCCCHHHHHHHCCCCEEEEEECCCEEEECCCCEEEEEECCCCCCCEECCCEE QVKKNDSNTNQIKITSSGSEINVNSGNVKIEKAKDQELNLFVEKGKTTVKQNGKSLAVEQ EEEECCCCCCEEEEEECCCEEEECCCCEEEEECCCCCEEEEEECCCEEECCCCCEEEECC GKKAEFKKSGIEITKIPIVLSSPQSQKLFYAEPNEVNVTFQWKIESGFESPLLEISRSPN CCCCHHHHCCCEEEEEEEEEECCCCCEEEEECCCEEEEEEEEEECCCCCCCHHHHCCCCC FQLIYFSQTIQGNQTTVSLKEGTFYWRVKVKNQKTKDVASSETNKFFVSKLEPFLGESPN EEEEEEEEECCCCEEEEEEECCEEEEEEEECCCCCCCHHCCCCCEEEHHHHHHHHCCCCC NGAVISFVQILPLVTVSWSKLNTTNLYQFYLSDSNQFQKPLKRIETVANQISFDDLKEGT CCEEEEHHHHHHHHEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHCCCE YYWKVIAKSSFPDTKDRETKVYSFTIKKQNSIPSPKWQRPNPESEISVEEIKHNQAILIW EEEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCEEHHHCCCCCEEEEE EGNSEIQSYTVKISKDAKLTNPIAKIETTSNFLVPDWNLLGHGHFFATITGKTKDGKETE CCCCCEEEEEEEEECCCCCCCCEEEEECCCCEECCCCEEEECCEEEEEEECCCCCCCCCC PSNSLSFSIVEQKKKTEVASVLEDNKSQPIQEPKLEILSPNGTVIQMKGKSSLDFHWKMS CCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEECCCCCCEEEEEEC GSTADRFDLVLYQHFPDKKVAIYKVSTKDTSYQLKDLSILDEGSFSWDLSVYKDSNFLLS CCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEEEECCCCEEEEEEEECCCEEEE RKGNFILALDQLKSLKPTDIEFISPKRLYKEKK ECCCEEEEEHHHCCCCCCCEEEECCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]