| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219948
Identifier: 183219948
GI number: 183219948
Start: 527203
End: 528219
Strand: Reverse
Name: 183219948
Synonym: LEPBI_I0530
Alternate gene names: NA
Gene position: 528219-527203 (Counterclockwise)
Preceding gene: 183219956
Following gene: 183219947
Centisome position: 14.67
GC content: 39.04
Gene sequence:
>1017_bases ATGGCGATTTACTCCCGGTACGAACCACATAGAAAGAAGAAATCAAAGGCACCGCTATTTTTATTGGTTTTAGCGCTAGG CCTTTCCGCTTTAGGGTTTACCTATAGAAAAGAAATTTATTTTCTTTTTGCCAAAGACCAAAGTGTCAGGGCCGAAAAAA CCAAAGAAAAAACGATCGAACTCTGGAAATCTGGGAACCTAAAAGAAAAAGACATCGAAGATTTCCAATCCATTGCGACA ACCTATTCGGAAAAAGACCCAACAGATCCAGTTGCCTTCCACTTGATTGCACGTAGTTTGTTTTGGAATTTAAATCGATT GGGGATTCAATTTGAACATGATAGTCTGATTTTGCATTTAGGTTCCTCCTTTCGTGAATTCATCGGAAGTTCTGTTCTTG CTGCGTCCACCTTAGATTCCATCTTTTGGAATGCTAGGACTGCAGAGGCCTTCTCCTCTTCTCCCTTTTCTGATTGGGAA AATAATCGTGTCCTATTATTCTTAGGAGAAACACACCGAGGTGTCAAAAGGCCACAGGTGCTCGTGGGAGAGTATGGGAA TTTAGATCGTTCTAAATTATCATCAGAACTCCAATCCGTTTATGTGTGGCTACTTACGTTTAATACCATGCTTGCGGGGG ATGCGGCGGGACTCGATCATTTGATCACCATCACAAAAGATCCAAATTACAAAATTGGAATTCATTTTTCTCCGCGAGAA GAAAACTTCCTTCGTGGTTTGGGTAAATATTATAAAAAAGATTATGTGGGTGCTTTATCATTACTCAGGCAAGCCAAAAC CAATAATCCTGATCGTATCACGGAAACTTCCATCATCACAGAAGCGACTATATTTCACTTACAAAATTTATCACAGAAAG GGATTGATTTGTTAGAAGATTTTTATGTATCCAATGGGAAAAAAAATACGGCGATCCCAATTCTAATCGCAAGTTTCATC AAAGAAAAACCAGGTCTGAAAACCAAATTGGATTTAAGTTTGGATCCAAAAGAATGA
Upstream 100 bases:
>100_bases TTCGTCATCTTCTAAAAAGTCATCTTCCATACCCTTCTCACTAAATCACAAAGAAAAAGCCGTGTCAAGTGGGGAGGGCA AAAAAAAATGGGAACAAACG
Downstream 100 bases:
>100_bases AATCCATCATAAGTCTTGGAATTTGTTTCCTATTGAATTTTGGTTGTGGTCTTTTTTATAAGGGTGTTCCCAAACCAGGT GAGTTTTGTTATGTGCTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MAIYSRYEPHRKKKSKAPLFLLVLALGLSALGFTYRKEIYFLFAKDQSVRAEKTKEKTIELWKSGNLKEKDIEDFQSIAT TYSEKDPTDPVAFHLIARSLFWNLNRLGIQFEHDSLILHLGSSFREFIGSSVLAASTLDSIFWNARTAEAFSSSPFSDWE NNRVLLFLGETHRGVKRPQVLVGEYGNLDRSKLSSELQSVYVWLLTFNTMLAGDAAGLDHLITITKDPNYKIGIHFSPRE ENFLRGLGKYYKKDYVGALSLLRQAKTNNPDRITETSIITEATIFHLQNLSQKGIDLLEDFYVSNGKKNTAIPILIASFI KEKPGLKTKLDLSLDPKE
Sequences:
>Translated_338_residues MAIYSRYEPHRKKKSKAPLFLLVLALGLSALGFTYRKEIYFLFAKDQSVRAEKTKEKTIELWKSGNLKEKDIEDFQSIAT TYSEKDPTDPVAFHLIARSLFWNLNRLGIQFEHDSLILHLGSSFREFIGSSVLAASTLDSIFWNARTAEAFSSSPFSDWE NNRVLLFLGETHRGVKRPQVLVGEYGNLDRSKLSSELQSVYVWLLTFNTMLAGDAAGLDHLITITKDPNYKIGIHFSPRE ENFLRGLGKYYKKDYVGALSLLRQAKTNNPDRITETSIITEATIFHLQNLSQKGIDLLEDFYVSNGKKNTAIPILIASFI KEKPGLKTKLDLSLDPKE >Mature_337_residues AIYSRYEPHRKKKSKAPLFLLVLALGLSALGFTYRKEIYFLFAKDQSVRAEKTKEKTIELWKSGNLKEKDIEDFQSIATT YSEKDPTDPVAFHLIARSLFWNLNRLGIQFEHDSLILHLGSSFREFIGSSVLAASTLDSIFWNARTAEAFSSSPFSDWEN NRVLLFLGETHRGVKRPQVLVGEYGNLDRSKLSSELQSVYVWLLTFNTMLAGDAAGLDHLITITKDPNYKIGIHFSPREE NFLRGLGKYYKKDYVGALSLLRQAKTNNPDRITETSIITEATIFHLQNLSQKGIDLLEDFYVSNGKKNTAIPILIASFIK EKPGLKTKLDLSLDPKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38407; Mature: 38276
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIYSRYEPHRKKKSKAPLFLLVLALGLSALGFTYRKEIYFLFAKDQSVRAEKTKEKTIE CCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCHHEEEEEEEEEECCCCCHHHHHHHHHHH LWKSGNLKEKDIEDFQSIATTYSEKDPTDPVAFHLIARSLFWNLNRLGIQFEHDSLILHL HHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHEEEECCCCEEEEE GSSFREFIGSSVLAASTLDSIFWNARTAEAFSSSPFSDWENNRVLLFLGETHRGVKRPQV CHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCEE LVGEYGNLDRSKLSSELQSVYVWLLTFNTMLAGDAAGLDHLITITKDPNYKIGIHFSPRE EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEECCCH ENFLRGLGKYYKKDYVGALSLLRQAKTNNPDRITETSIITEATIFHLQNLSQKGIDLLED HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FYVSNGKKNTAIPILIASFIKEKPGLKTKLDLSLDPKE HHHCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCC >Mature Secondary Structure AIYSRYEPHRKKKSKAPLFLLVLALGLSALGFTYRKEIYFLFAKDQSVRAEKTKEKTIE CCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCHHEEEEEEEEEECCCCCHHHHHHHHHHH LWKSGNLKEKDIEDFQSIATTYSEKDPTDPVAFHLIARSLFWNLNRLGIQFEHDSLILHL HHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHEEEECCCCEEEEE GSSFREFIGSSVLAASTLDSIFWNARTAEAFSSSPFSDWENNRVLLFLGETHRGVKRPQV CHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCEE LVGEYGNLDRSKLSSELQSVYVWLLTFNTMLAGDAAGLDHLITITKDPNYKIGIHFSPRE EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEECCCH ENFLRGLGKYYKKDYVGALSLLRQAKTNNPDRITETSIITEATIFHLQNLSQKGIDLLED HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FYVSNGKKNTAIPILIASFIKEKPGLKTKLDLSLDPKE HHHCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA