| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219649
Identifier: 183219649
GI number: 183219649
Start: 215597
End: 216505
Strand: Direct
Name: 183219649
Synonym: LEPBI_I0224
Alternate gene names: NA
Gene position: 215597-216505 (Clockwise)
Preceding gene: 183219648
Following gene: 183219650
Centisome position: 5.99
GC content: 39.27
Gene sequence:
>909_bases ATGGAAAATTTTTTATTACTTGGAATCTGTTTTGGGCTGGGGTTACTCTTTCGAAGGTTTCCTCAGTTCCCCGAAACCAC TCCCAAAGTTCTCAATGGTTTTATTTTATATGTCTCTTTACCTTCCCTTGTTTTGTATCATGTACACGAGTTAACAGTTG GTGTCAGCGCAATTTTACCAACTTCCATGCCTTGGTTAGTATTTGGATTTGCTCTATTGTTTTTTTTGGGACTGTACAAA CTAAAGGTCATGTCGTTTCAGACGACTGTTTGTTTAGTGCTAACGGCAGGTCTCGGCAATACTTCTTTTGTTGGGTTTCC ACTGCTCGAGGCTTATCTTGGAAAAGAATCACTAGGGTATGGAATTCTTGCGGACCAATTGGGAACCTTTATGGTTTTGA GTTTTCCTGGAATCATTTTAGCTTCTATCGCAATGGATGGAAAATGGCACTTTTATACTTTGGTCAAACGTGTCCTCGGA TTTGCTCCCATTTACGCTTTGGTTTTTGCAATCCTCACGAGACAGTGGGAGTATCCGAGTGCTCTCAAAATCGTGTTATT ACGATTAGGTGACACTTTGACACCGCTTGCTCTAGTATCTGTGGGATATATGTTGGACCTAAGAACCATTGCTGGACATG GAAAGTATTTACTTTTGGGATTGGGGTTTAAATTGGTTTTAGCGCCAATCCTTGTTTATTTTGTTTATGCAGAAGTGAGA GAAGATCAGTTACTCTTTCAAACAATTTTATTAGAATCAGCGATGGCGCCAATGGTGACATCCACAGTCATCACGATTGA AAAAAACATTTCTCCTCATTTAGCAAGCCTTATGTTAGGCATTGGAATTCCAGTTTCGTTTCTAACGACATATGGTTTGA ATTTACTCATAAAAGGGAATATCATTTGA
Upstream 100 bases:
>100_bases GATATGCGGAAATGGTTCGCGATGGACTAGAGGCACCAAGACAAAAAGAAGGTGTGTTCTTTGATCCCAAAGCTCTTGAG ACCTTCTTATCCTTTTAAAG
Downstream 100 bases:
>100_bases ATATTAAATTTTTATTACTTTTGATCTTAGCAATGGTTTCTTGGGGGATCTCTTGGCCCATTGCAAAGGTGATTGCTGGA ATGGTTCCTGTTCCTGTCCT
Product: putative permease
Products: NA
Alternate protein names: Permease; Integral Membrane Protein; Auxin Efflux Carrier Family Protein; Malate Permease; Auxin Efflux Carrier Protein; Transporter Auxin Efflux Carrier Family; Auxin Efflux Carrier Superfamily
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MENFLLLGICFGLGLLFRRFPQFPETTPKVLNGFILYVSLPSLVLYHVHELTVGVSAILPTSMPWLVFGFALLFFLGLYK LKVMSFQTTVCLVLTAGLGNTSFVGFPLLEAYLGKESLGYGILADQLGTFMVLSFPGIILASIAMDGKWHFYTLVKRVLG FAPIYALVFAILTRQWEYPSALKIVLLRLGDTLTPLALVSVGYMLDLRTIAGHGKYLLLGLGFKLVLAPILVYFVYAEVR EDQLLFQTILLESAMAPMVTSTVITIEKNISPHLASLMLGIGIPVSFLTTYGLNLLIKGNII
Sequences:
>Translated_302_residues MENFLLLGICFGLGLLFRRFPQFPETTPKVLNGFILYVSLPSLVLYHVHELTVGVSAILPTSMPWLVFGFALLFFLGLYK LKVMSFQTTVCLVLTAGLGNTSFVGFPLLEAYLGKESLGYGILADQLGTFMVLSFPGIILASIAMDGKWHFYTLVKRVLG FAPIYALVFAILTRQWEYPSALKIVLLRLGDTLTPLALVSVGYMLDLRTIAGHGKYLLLGLGFKLVLAPILVYFVYAEVR EDQLLFQTILLESAMAPMVTSTVITIEKNISPHLASLMLGIGIPVSFLTTYGLNLLIKGNII >Mature_302_residues MENFLLLGICFGLGLLFRRFPQFPETTPKVLNGFILYVSLPSLVLYHVHELTVGVSAILPTSMPWLVFGFALLFFLGLYK LKVMSFQTTVCLVLTAGLGNTSFVGFPLLEAYLGKESLGYGILADQLGTFMVLSFPGIILASIAMDGKWHFYTLVKRVLG FAPIYALVFAILTRQWEYPSALKIVLLRLGDTLTPLALVSVGYMLDLRTIAGHGKYLLLGLGFKLVLAPILVYFVYAEVR EDQLLFQTILLESAMAPMVTSTVITIEKNISPHLASLMLGIGIPVSFLTTYGLNLLIKGNII
Specific function: Unknown
COG id: COG0679
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33282; Mature: 33282
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENFLLLGICFGLGLLFRRFPQFPETTPKVLNGFILYVSLPSLVLYHVHELTVGVSAILP CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TSMPWLVFGFALLFFLGLYKLKVMSFQTTVCLVLTAGLGNTSFVGFPLLEAYLGKESLGY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHEECCCCCCCCHHHHHHHHHHCCCCCCC GILADQLGTFMVLSFPGIILASIAMDGKWHFYTLVKRVLGFAPIYALVFAILTRQWEYPS HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH ALKIVLLRLGDTLTPLALVSVGYMLDLRTIAGHGKYLLLGLGFKLVLAPILVYFVYAEVR HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHH EDQLLFQTILLESAMAPMVTSTVITIEKNISPHLASLMLGIGIPVSFLTTYGLNLLIKGN HHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHCCCCHHHHHHCCCEEEEECC II CC >Mature Secondary Structure MENFLLLGICFGLGLLFRRFPQFPETTPKVLNGFILYVSLPSLVLYHVHELTVGVSAILP CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TSMPWLVFGFALLFFLGLYKLKVMSFQTTVCLVLTAGLGNTSFVGFPLLEAYLGKESLGY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHEECCCCCCCCHHHHHHHHHHCCCCCCC GILADQLGTFMVLSFPGIILASIAMDGKWHFYTLVKRVLGFAPIYALVFAILTRQWEYPS HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH ALKIVLLRLGDTLTPLALVSVGYMLDLRTIAGHGKYLLLGLGFKLVLAPILVYFVYAEVR HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHH EDQLLFQTILLESAMAPMVTSTVITIEKNISPHLASLMLGIGIPVSFLTTYGLNLLIKGN HHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHCCCCHHHHHHCCCEEEEECC II CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA