| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219646
Identifier: 183219646
GI number: 183219646
Start: 212312
End: 212875
Strand: Direct
Name: 183219646
Synonym: LEPBI_I0221
Alternate gene names: NA
Gene position: 212312-212875 (Clockwise)
Preceding gene: 183219645
Following gene: 183219648
Centisome position: 5.9
GC content: 33.16
Gene sequence:
>564_bases ATGGTTTTAGAAATGAAAAAGGTAATTGTGATATGTATAATATTTTTGCTTGGATTTCAAATGGAGGCAATAGAAGTTTC AAAAAAGAAAATCGAGTTTTTTGTCGAACATTCTGCTCAAAATGTAACCGGTATCTGTAATGAAATCCAAATGGAAAATC CAAACATACAATCGGTAGGTGGTCAGTATCGTTTAAAATCTCCCTTTGAAATCAAAATCCCCTTATTAAAAATTACTTCC GGTGATTCCGATCGTGATTCTCATATCCAAGAAATTTTAGGGTATCCAGAGTCCCAATCCATCCAAGTCAAAGTCGAATC CATTCACATATCAAAAACAAATGATCCATCTTATTCCATCAAAGGGAAATTAGTGATCCATGGTAAAAGTAAAGATTTTG TTACAGATGTCAGTGTGCAGGTTTTGGAATCTGGTTTTTTACAAGTGGATGGAACATTAGTCGTTCGGTTTTCTGAGTTT GATTTAGAAAATCCATCGTTATTATTTTTGAAAGCGAAAGATGAAATCCAAGTGAAATACCGATTTGAATTACGAATGAA ATGA
Upstream 100 bases:
>100_bases AAAAAATAGGAAACAGATCTCTAAAATGGATGCGAAAGAATAAAATTTTTTAGTCCAATCTTCACACACAGTCTATAGCT TCTATTGATAAGGTAAGAAA
Downstream 100 bases:
>100_bases TATGGAATCATTTTTCACAACTGTTTTTCGATCCTTTGCAATGGAGGGATTAACTTCCGATTAGTTCTACCAATCGATTG TATTTTAAGATGATCCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MVLEMKKVIVICIIFLLGFQMEAIEVSKKKIEFFVEHSAQNVTGICNEIQMENPNIQSVGGQYRLKSPFEIKIPLLKITS GDSDRDSHIQEILGYPESQSIQVKVESIHISKTNDPSYSIKGKLVIHGKSKDFVTDVSVQVLESGFLQVDGTLVVRFSEF DLENPSLLFLKAKDEIQVKYRFELRMK
Sequences:
>Translated_187_residues MVLEMKKVIVICIIFLLGFQMEAIEVSKKKIEFFVEHSAQNVTGICNEIQMENPNIQSVGGQYRLKSPFEIKIPLLKITS GDSDRDSHIQEILGYPESQSIQVKVESIHISKTNDPSYSIKGKLVIHGKSKDFVTDVSVQVLESGFLQVDGTLVVRFSEF DLENPSLLFLKAKDEIQVKYRFELRMK >Mature_187_residues MVLEMKKVIVICIIFLLGFQMEAIEVSKKKIEFFVEHSAQNVTGICNEIQMENPNIQSVGGQYRLKSPFEIKIPLLKITS GDSDRDSHIQEILGYPESQSIQVKVESIHISKTNDPSYSIKGKLVIHGKSKDFVTDVSVQVLESGFLQVDGTLVVRFSEF DLENPSLLFLKAKDEIQVKYRFELRMK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21282; Mature: 21282
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLEMKKVIVICIIFLLGFQMEAIEVSKKKIEFFVEHSAQNVTGICNEIQMENPNIQSVG CEECHHHHHHHHHHHHHCCEEEEHHHHHHHEEEEEECCCCCHHHHHHEEEECCCCHHHCC GQYRLKSPFEIKIPLLKITSGDSDRDSHIQEILGYPESQSIQVKVESIHISKTNDPSYSI CEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCEEE KGKLVIHGKSKDFVTDVSVQVLESGFLQVDGTLVVRFSEFDLENPSLLFLKAKDEIQVKY EEEEEEEECCCCEEEHHHHEEHHCCCEEECCEEEEEEEECCCCCCCEEEEEECCCEEEEE RFELRMK EEEEECC >Mature Secondary Structure MVLEMKKVIVICIIFLLGFQMEAIEVSKKKIEFFVEHSAQNVTGICNEIQMENPNIQSVG CEECHHHHHHHHHHHHHCCEEEEHHHHHHHEEEEEECCCCCHHHHHHEEEECCCCHHHCC GQYRLKSPFEIKIPLLKITSGDSDRDSHIQEILGYPESQSIQVKVESIHISKTNDPSYSI CEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCEEE KGKLVIHGKSKDFVTDVSVQVLESGFLQVDGTLVVRFSEFDLENPSLLFLKAKDEIQVKY EEEEEEEECCCCEEEHHHHEEHHCCCEEECCEEEEEEEECCCCCCCEEEEEECCCEEEEE RFELRMK EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA