| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219570
Identifier: 183219570
GI number: 183219570
Start: 141349
End: 142203
Strand: Direct
Name: 183219570
Synonym: LEPBI_I0145
Alternate gene names: NA
Gene position: 141349-142203 (Clockwise)
Preceding gene: 183219569
Following gene: 183219580
Centisome position: 3.93
GC content: 36.14
Gene sequence:
>855_bases TTGACCTCTATGTTCTGCTCAAAAAAACTGATCTTAGGCTCACTATTTTTTCTTTTCTCTTGTGGTACGGCCGACTTAAG ACCACCCCATTTATCTTATGATAAGATTGATCCTGAGTTAAAGAAAAAAGGCATAACAGTAGTTACCAATCCTCCCATCA AAGAATTAAGTCCTGGGGATTGGAAAGAGTATAAACAAGTTCAGTTTATACTTAAAGATGTATGGCATAATCATTTTGTC AGATTTTTTACTCCTATCAAAGAACAAGAAATCAGGATGCGGGTATATTTGGATTTCGAAGCTGATGCCATGCAAGTTGA GTTATTAGGTGGAGAGAAAAAAGGTTTTATCTACGGATTAGAAAAAAAAGTTACTTATCAAATTTCTCCAGAAACAGGGA AAGCTTACAGTGACGATACTGAAGTTAGAATATATCTCGAGTCACTTCGATCTTACCTTACTTTACCATGGCGACTTAAG AACTATCCTATCATCCAATATGCAGGCCAAAAACAAAAACTAGAACAAAACTATGAAGTGGTTTATTTCACATCCGTTCA AATGAATGCCACTCCCGATACAGACCAATATGTTGGTTATTTTGAACAAAAAAGTGGTGCATTGGAATGGTTAGAATTCA CCTATCGAGAATTGTTTAGTTTTTACCAAGGTGTTTTGAAATTTGGATTTTATGAACCTTGGAATGGAAAACAATACCCA AGACGGATCACCATCTTAGATCGATTCGAAGATCCAGACTTTGTCCATGAACTCCGAATTGAAAAAATCGAAATCCCAGT GAAACCAATGGAAGAAGTGGATAAGGTTTTGGAATTACCAGAGAAGGGGAAGTGA
Upstream 100 bases:
>100_bases TTCTGTTGCGTTAATGAGCAATGAGACAAGCCATCATTCTATGATTTCGATTGTACCTGCCTCACTTTCCCTATTGACAG ACATTTGTTTTTGATGCAAT
Downstream 100 bases:
>100_bases GATTGGAGCGGAGAGCCCGGTCCACCACTGGAACAGTGGTGGATTCGCCCATAGAGTTTAATTCAATGTAAATCGAATGG GAACAAGCACTTTTACAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MTSMFCSKKLILGSLFFLFSCGTADLRPPHLSYDKIDPELKKKGITVVTNPPIKELSPGDWKEYKQVQFILKDVWHNHFV RFFTPIKEQEIRMRVYLDFEADAMQVELLGGEKKGFIYGLEKKVTYQISPETGKAYSDDTEVRIYLESLRSYLTLPWRLK NYPIIQYAGQKQKLEQNYEVVYFTSVQMNATPDTDQYVGYFEQKSGALEWLEFTYRELFSFYQGVLKFGFYEPWNGKQYP RRITILDRFEDPDFVHELRIEKIEIPVKPMEEVDKVLELPEKGK
Sequences:
>Translated_284_residues MTSMFCSKKLILGSLFFLFSCGTADLRPPHLSYDKIDPELKKKGITVVTNPPIKELSPGDWKEYKQVQFILKDVWHNHFV RFFTPIKEQEIRMRVYLDFEADAMQVELLGGEKKGFIYGLEKKVTYQISPETGKAYSDDTEVRIYLESLRSYLTLPWRLK NYPIIQYAGQKQKLEQNYEVVYFTSVQMNATPDTDQYVGYFEQKSGALEWLEFTYRELFSFYQGVLKFGFYEPWNGKQYP RRITILDRFEDPDFVHELRIEKIEIPVKPMEEVDKVLELPEKGK >Mature_283_residues TSMFCSKKLILGSLFFLFSCGTADLRPPHLSYDKIDPELKKKGITVVTNPPIKELSPGDWKEYKQVQFILKDVWHNHFVR FFTPIKEQEIRMRVYLDFEADAMQVELLGGEKKGFIYGLEKKVTYQISPETGKAYSDDTEVRIYLESLRSYLTLPWRLKN YPIIQYAGQKQKLEQNYEVVYFTSVQMNATPDTDQYVGYFEQKSGALEWLEFTYRELFSFYQGVLKFGFYEPWNGKQYPR RITILDRFEDPDFVHELRIEKIEIPVKPMEEVDKVLELPEKGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33623; Mature: 33492
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSMFCSKKLILGSLFFLFSCGTADLRPPHLSYDKIDPELKKKGITVVTNPPIKELSPGD CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCEEEEECCCHHCCCCCC WKEYKQVQFILKDVWHNHFVRFFTPIKEQEIRMRVYLDFEADAMQVELLGGEKKGFIYGL HHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCEEEEE EKKVTYQISPETGKAYSDDTEVRIYLESLRSYLTLPWRLKNYPIIQYAGQKQKLEQNYEV CEEEEEEECCCCCCCCCCCCCEEHHHHHHHHHEECCEEECCCCEEEECCCHHHHCCCCEE VYFTSVQMNATPDTDQYVGYFEQKSGALEWLEFTYRELFSFYQGVLKFGFYEPWNGKQYP EEEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC RRITILDRFEDPDFVHELRIEKIEIPVKPMEEVDKVLELPEKGK EEEEEEECCCCCCHHHHHHHEEEECCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure TSMFCSKKLILGSLFFLFSCGTADLRPPHLSYDKIDPELKKKGITVVTNPPIKELSPGD CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCEEEEECCCHHCCCCCC WKEYKQVQFILKDVWHNHFVRFFTPIKEQEIRMRVYLDFEADAMQVELLGGEKKGFIYGL HHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCEEEEE EKKVTYQISPETGKAYSDDTEVRIYLESLRSYLTLPWRLKNYPIIQYAGQKQKLEQNYEV CEEEEEEECCCCCCCCCCCCCEEHHHHHHHHHEECCEEECCCCEEEECCCHHHHCCCCEE VYFTSVQMNATPDTDQYVGYFEQKSGALEWLEFTYRELFSFYQGVLKFGFYEPWNGKQYP EEEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC RRITILDRFEDPDFVHELRIEKIEIPVKPMEEVDKVLELPEKGK EEEEEEECCCCCCHHHHHHHEEEECCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA