Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183219539
Identifier: 183219539
GI number: 183219539
Start: 114906
End: 116696
Strand: Reverse
Name: 183219539
Synonym: LEPBI_I0112
Alternate gene names: NA
Gene position: 116696-114906 (Counterclockwise)
Preceding gene: 183219540
Following gene: 183219538
Centisome position: 3.24
GC content: 40.15
Gene sequence:
>1791_bases TTGAAATCTAAATTTGTTTTTGTTTTATTTTTTAGTTATTTTTGCACCTATGCTTCGTTATCTGCCATTCAAGTGGATGT AAAAGATATTACGGGTAAAAGTTTGGACCTCGTGATGGTAACCATCAAAGCAGAAAAACCACAAGTCCCACCTCGTGATG ACCATGGTTACCCTCCCGAAGGATTAGAATTTTTCATCACACCAGAAGTGACCATGTTCACAAGTCCCAATGGGAAAGTC AATATCCCGTTTCCTTATGCTCCACAGGTAATCATTCGACTTCGCAAAATTGGATATAAAGATCTGAATCTAAGGTCATA TTCCAATGGTAGTTCTGTTTCTTTTCGTATGGAGAAAATAACTGATCCCAATCAATTGGTAGGGCAGTATCCATCAAATA GTTGGGTCGCCGCACTTGAGTTTGGTGAAGATAAGGATCTTCGAAAAACCTATTTGGAACAGTGTGGTTTTTGCCACCAA CAAGGAAGTTTTTTTATGAGACGTGCCTTCACGGAGGGAGACTGGGAAGAGATCATCAACCGAATGATGGGATATGGAGC AAGGCCTCACGGGAAAGCAAAGAAAAAACTACCGGGTATTTTAGCAAATGCGTATGTTGATTTGCTCAAACACCCGGAAC GAGTCAAACCTGGTCGAACTTGGGGAAAAGAATTGTATGGAGCTGTGATTCGAGAATGGCCTATGGGAGATAGTTTTTCC CAAATGCATGATCTATTATTTCATAAGAAAACTGGATTGGTCTATGTCGGCGATAATATCCAAGACAGACTTTGGGAGAT TAATCCTAACACTGGTAAAACGGTAGTTTATAAAGTTCCCAAACAACCAGAAGATGAATTGGGTGGACTATTGCCAGGTA GGTTACGTTCCTTTCAAAAACATGAAACCTATGTTGGGTTACATTCACTTGCCGAATCACCGATTGATGGTCATATATTC ATCACACCATCATTACAAAAGCGCATTACAGAGTTTGATCCTTTTACAAAAAAATTTAAAGACCATATGTTTCAAAATGG ATTGTATCCTCATACCATCCGCATTGATGAAAAAGATCGTGTATGGTTTACCTTGGCTCTTTCCAATCAAGTGGGGATGT TTGATCGCACAAATAACACATTTCATTATTATGATTTACCCGCGCGAACCAAAAAAGAAAGTTTTAGTTTATGGATCAGT GGATTCATCATCAAACTGATGAACTGGGGTTTCCCAATGCATTTATTGCCTGTAGATGAACGAGTGAGTGGAATGCCACT TCCTTATGGGATTGATGTTGCCCCGAATGGAAAAGTTTGGTTTACCCGATTGCATGCGGATACAATTGGTGTGATTGATC CAAAAGATGATTCGTTCCAATTGATCACAACTCCTTTCCAAGGCCCACGTAGACTCCGCGTCGATCGAAACAATCATGTT TGGATATCTGTATTTCCAGAAGGTTCCATTGCGAGGTACACTCCTGAAGATGGAAAGTTTAAACTTTACCCACTTCCCAC TGCCATTGATGGAGTGGAAACACCATACTCATTGAATGTAGACCGCAAATCAAATCTTGTTTGGGTCACTGGTACTTCGT CTGACAATCTAATGGCGATGGATATCAATACAGAAACATGGAAAGTGTATCCAATGAGTCGTAAAGTTACCTTTACACGT GATATTGAATTTTCTCTCGATGGAAAGGCTTATTCCTCAAATGGAGCCTTCCCAAGTTGGCACATTGAAGACGGCCAACC AACGTTAATGGAAGTCACACAATCAAAATGA
Upstream 100 bases:
>100_bases TTATCCAACCACCAACTCAAATCCGTGTTTGGTTACATTCCCAAGTACACTTCCAAAGAAACATTCATTGCTTACTTAAA TGCCAAAGGAGTTCCCTATG
Downstream 100 bases:
>100_bases ACCAATCAAATGTTTACAATAAGGGACAGATGTTTCGATTTCTGACTGCTTCCTTTTTAGGATTTTTAGCAGGTCACCTA ACAAACTATAGTGTGATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 596; Mature: 596
Protein sequence:
>596_residues MKSKFVFVLFFSYFCTYASLSAIQVDVKDITGKSLDLVMVTIKAEKPQVPPRDDHGYPPEGLEFFITPEVTMFTSPNGKV NIPFPYAPQVIIRLRKIGYKDLNLRSYSNGSSVSFRMEKITDPNQLVGQYPSNSWVAALEFGEDKDLRKTYLEQCGFCHQ QGSFFMRRAFTEGDWEEIINRMMGYGARPHGKAKKKLPGILANAYVDLLKHPERVKPGRTWGKELYGAVIREWPMGDSFS QMHDLLFHKKTGLVYVGDNIQDRLWEINPNTGKTVVYKVPKQPEDELGGLLPGRLRSFQKHETYVGLHSLAESPIDGHIF ITPSLQKRITEFDPFTKKFKDHMFQNGLYPHTIRIDEKDRVWFTLALSNQVGMFDRTNNTFHYYDLPARTKKESFSLWIS GFIIKLMNWGFPMHLLPVDERVSGMPLPYGIDVAPNGKVWFTRLHADTIGVIDPKDDSFQLITTPFQGPRRLRVDRNNHV WISVFPEGSIARYTPEDGKFKLYPLPTAIDGVETPYSLNVDRKSNLVWVTGTSSDNLMAMDINTETWKVYPMSRKVTFTR DIEFSLDGKAYSSNGAFPSWHIEDGQPTLMEVTQSK
Sequences:
>Translated_596_residues MKSKFVFVLFFSYFCTYASLSAIQVDVKDITGKSLDLVMVTIKAEKPQVPPRDDHGYPPEGLEFFITPEVTMFTSPNGKV NIPFPYAPQVIIRLRKIGYKDLNLRSYSNGSSVSFRMEKITDPNQLVGQYPSNSWVAALEFGEDKDLRKTYLEQCGFCHQ QGSFFMRRAFTEGDWEEIINRMMGYGARPHGKAKKKLPGILANAYVDLLKHPERVKPGRTWGKELYGAVIREWPMGDSFS QMHDLLFHKKTGLVYVGDNIQDRLWEINPNTGKTVVYKVPKQPEDELGGLLPGRLRSFQKHETYVGLHSLAESPIDGHIF ITPSLQKRITEFDPFTKKFKDHMFQNGLYPHTIRIDEKDRVWFTLALSNQVGMFDRTNNTFHYYDLPARTKKESFSLWIS GFIIKLMNWGFPMHLLPVDERVSGMPLPYGIDVAPNGKVWFTRLHADTIGVIDPKDDSFQLITTPFQGPRRLRVDRNNHV WISVFPEGSIARYTPEDGKFKLYPLPTAIDGVETPYSLNVDRKSNLVWVTGTSSDNLMAMDINTETWKVYPMSRKVTFTR DIEFSLDGKAYSSNGAFPSWHIEDGQPTLMEVTQSK >Mature_596_residues MKSKFVFVLFFSYFCTYASLSAIQVDVKDITGKSLDLVMVTIKAEKPQVPPRDDHGYPPEGLEFFITPEVTMFTSPNGKV NIPFPYAPQVIIRLRKIGYKDLNLRSYSNGSSVSFRMEKITDPNQLVGQYPSNSWVAALEFGEDKDLRKTYLEQCGFCHQ QGSFFMRRAFTEGDWEEIINRMMGYGARPHGKAKKKLPGILANAYVDLLKHPERVKPGRTWGKELYGAVIREWPMGDSFS QMHDLLFHKKTGLVYVGDNIQDRLWEINPNTGKTVVYKVPKQPEDELGGLLPGRLRSFQKHETYVGLHSLAESPIDGHIF ITPSLQKRITEFDPFTKKFKDHMFQNGLYPHTIRIDEKDRVWFTLALSNQVGMFDRTNNTFHYYDLPARTKKESFSLWIS GFIIKLMNWGFPMHLLPVDERVSGMPLPYGIDVAPNGKVWFTRLHADTIGVIDPKDDSFQLITTPFQGPRRLRVDRNNHV WISVFPEGSIARYTPEDGKFKLYPLPTAIDGVETPYSLNVDRKSNLVWVTGTSSDNLMAMDINTETWKVYPMSRKVTFTR DIEFSLDGKAYSSNGAFPSWHIEDGQPTLMEVTQSK
Specific function: Unknown
COG id: COG4257
COG function: function code V; Streptogramin lyase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68326; Mature: 68326
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKFVFVLFFSYFCTYASLSAIQVDVKDITGKSLDLVMVTIKAEKPQVPPRDDHGYPPE CCCCEEEHHHHHHHHHHHCCEEEEEEHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCC GLEFFITPEVTMFTSPNGKVNIPFPYAPQVIIRLRKIGYKDLNLRSYSNGSSVSFRMEKI CCEEEECCCEEEEECCCCEEECCCCCCHHHHHHHHHCCCCCCCEEECCCCCCEEEEEECC TDPNQLVGQYPSNSWVAALEFGEDKDLRKTYLEQCGFCHQQGSFFMRRAFTEGDWEEIIN CCHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCCHHCCCHHHHHHCCCCCHHHHHH RMMGYGARPHGKAKKKLPGILANAYVDLLKHPERVKPGRTWGKELYGAVIREWPMGDSFS HHHCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHH QMHDLLFHKKTGLVYVGDNIQDRLWEINPNTGKTVVYKVPKQPEDELGGLLPGRLRSFQK HHHHHHHCCCCCEEEECCCCCCCEEEECCCCCCEEEEECCCCCHHHHCCCCCHHHHHHHH HETYVGLHSLAESPIDGHIFITPSLQKRITEFDPFTKKFKDHMFQNGLYPHTIRIDEKDR HHHHEEHHHHHCCCCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCC VWFTLALSNQVGMFDRTNNTFHYYDLPARTKKESFSLWISGFIIKLMNWGFPMHLLPVDE EEEEEEECCCCCEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCC RVSGMPLPYGIDVAPNGKVWFTRLHADTIGVIDPKDDSFQLITTPFQGPRRLRVDRNNHV CCCCCCCCCCEEECCCCCEEEEEEECCEEEEECCCCCCEEEEECCCCCCEEEEEECCCEE WISVFPEGSIARYTPEDGKFKLYPLPTAIDGVETPYSLNVDRKSNLVWVTGTSSDNLMAM EEEEECCCCEEEECCCCCCEEEEECCCCCCCCCCCEEECCCCCCCEEEEEECCCCCEEEE DINTETWKVYPMSRKVTFTRDIEFSLDGKAYSSNGAFPSWHIEDGQPTLMEVTQSK EECCCEEEEEECCEEEEEEEEEEEEECCCEECCCCCCCEEEECCCCCCEEEEECCC >Mature Secondary Structure MKSKFVFVLFFSYFCTYASLSAIQVDVKDITGKSLDLVMVTIKAEKPQVPPRDDHGYPPE CCCCEEEHHHHHHHHHHHCCEEEEEEHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCC GLEFFITPEVTMFTSPNGKVNIPFPYAPQVIIRLRKIGYKDLNLRSYSNGSSVSFRMEKI CCEEEECCCEEEEECCCCEEECCCCCCHHHHHHHHHCCCCCCCEEECCCCCCEEEEEECC TDPNQLVGQYPSNSWVAALEFGEDKDLRKTYLEQCGFCHQQGSFFMRRAFTEGDWEEIIN CCHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCCHHCCCHHHHHHCCCCCHHHHHH RMMGYGARPHGKAKKKLPGILANAYVDLLKHPERVKPGRTWGKELYGAVIREWPMGDSFS HHHCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHH QMHDLLFHKKTGLVYVGDNIQDRLWEINPNTGKTVVYKVPKQPEDELGGLLPGRLRSFQK HHHHHHHCCCCCEEEECCCCCCCEEEECCCCCCEEEEECCCCCHHHHCCCCCHHHHHHHH HETYVGLHSLAESPIDGHIFITPSLQKRITEFDPFTKKFKDHMFQNGLYPHTIRIDEKDR HHHHEEHHHHHCCCCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCC VWFTLALSNQVGMFDRTNNTFHYYDLPARTKKESFSLWISGFIIKLMNWGFPMHLLPVDE EEEEEEECCCCCEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCC RVSGMPLPYGIDVAPNGKVWFTRLHADTIGVIDPKDDSFQLITTPFQGPRRLRVDRNNHV CCCCCCCCCCEEECCCCCEEEEEEECCEEEEECCCCCCEEEEECCCCCCEEEEEECCCEE WISVFPEGSIARYTPEDGKFKLYPLPTAIDGVETPYSLNVDRKSNLVWVTGTSSDNLMAM EEEEECCCCEEEECCCCCCEEEEECCCCCCCCCCCEEECCCCCCCEEEEEECCCCCEEEE DINTETWKVYPMSRKVTFTRDIEFSLDGKAYSSNGAFPSWHIEDGQPTLMEVTQSK EECCCEEEEEECCEEEEEEEEEEEEECCCEECCCCCCCEEEECCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA