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The map label for this gene is 183219529

Identifier: 183219529

GI number: 183219529

Start: 102794

End: 104335

Strand: Direct

Name: 183219529

Synonym: LEPBI_I0102

Alternate gene names: NA

Gene position: 102794-104335 (Clockwise)

Preceding gene: 183219528

Following gene: 183219530

Centisome position: 2.86

GC content: 38.2

Gene sequence:

>1542_bases
ATGGATAAACTGATCGATGTATCATATTTAAAGAAAGATTTAGATTTAGAAGCGGACTTTGTGATTGTTGGGTCAGGTGC
TGGTGGAGGAACCAGTGCTGAGATTTTAGCGAAAGCAGGTTACTCTGTCATCATTGTAGAGGAAGGAAATTATGAACGAA
GTAAGGACTTTGATTTAAAAGAACTTTCCACATTCAATCGATTGTATTTTGAAGGTGCCACTCGGCCAACCAAAGATAAA
GGGTTTACGGTTGTCCAAGGTAGAACCGTTGGAGGATCGACAGTTGTAAACTGGACAACTTGTATCAAAACTCCGAAGGA
AACGTTACAATATTGGGAAAAGGATCTTGGCATTAATGGTTTTTCCGAGGAAGAAATGGAGACTTGGTTTGATGTCGCAT
CAAAACGATTTTCTATCCAACCATGGGAAGCACATAACCAAAACAATAATCTACTCAGTGTTGGTGCTAAAAAACTTGGT
TGGAGGTATAGTTCCATACCTCGGAACGTAAAAAACTGCAATATGTTAGGTTATTGCGGATTGGGTTGCCCCATCGATGC
AAAACAAAGCCAACTTGTCACAACGATTCCTTCTGCTTTGAAGGAAAAAACAAGCTTACTATATAATACAAAAGCTCTCC
GTTATGTATGGAAAGACAACAAAATAGATCATTTGTACTGTTTGCCAAGTACCAAAGGCACTGATACTCAGCCCAAAATT
CGTTTGTTTGCTAAACATTTTATCACAAGTGCGGGTGCGATTAACTCACCTGCCCTTTTATTACGATCTCAATTACCTGA
TCCTTATCAGCTCATTGGAAAACGAACTTTTGTTCAATTGCATAACTATTCGGTAGCAGAAATGCCAACTCCAGTTTATG
GCTTTTTTGGTGCTCCTCAATCTGTTGCATCTGATGAATTCCTTTGGAAAGAAGGAGTCACAGGAAAAGCAGGATATAAT
ATCGAAGCCGTAGGTGCACAACCGATTGTATTGATGAATTTAAGAAAATTGGTAGGCGAAGAATTTGAACAATATGTGAA
GAGTTATCCCAACTTACATGTATTAGTTTCTCAGATTCGTGATGGATTTAGCGAAGAAAGTATTGGAGGAACTGTTCGAT
TGAATGAAGAAGGATATCCAATTTTAGATTATCCTTTAAACGATTTTATAGTAGATGGTATCCGAAGATCATATTTATCC
ATGGCAGAGTGCCAATTTGCAGCAGGTGCAAAGACAGTTGTTCCTGCCAACAATGCAGTGAATCCATTCTCTAGCTGGTC
AGAAGCAAAAAAAGGAATCGAAAAAATGGTGATCCAATCACCAAATACAGTTGTCAACTCTACACATCCGTTAGGTGGAA
ATGCAATGGGTAATTCTCAGGAAACATCTGTTGTGGATCCAAATGGAAAGTTTCATCATCTGACTAACTTATCAGTGATT
GATGGTTCCATTTTTCCAACAAGTTTAGGTGTAAATCCAAGTTTTACAATCTATGCCATAGCATCAAAATTAGCCACAAA
ATTGGCCAAGGAATTCAAATAA

Upstream 100 bases:

>100_bases
TTTTTATTACAATCGATGGTAACGATTGGATTTTTTGAAAACAGTTACTCATGGAAACATGTTGGTTACCCAGGGCCAAA
ACACGCATTAGGATTAAGAC

Downstream 100 bases:

>100_bases
GATGTTAACGCGTACAGAAGAGATCTTATTTGCTGCGATGGTATTTTTTTTAATGGTGGCGATGGGAAGTACACTTACCA
TTGAGAATTTTAAAAAGGCA

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 513; Mature: 513

Protein sequence:

>513_residues
MDKLIDVSYLKKDLDLEADFVIVGSGAGGGTSAEILAKAGYSVIIVEEGNYERSKDFDLKELSTFNRLYFEGATRPTKDK
GFTVVQGRTVGGSTVVNWTTCIKTPKETLQYWEKDLGINGFSEEEMETWFDVASKRFSIQPWEAHNQNNNLLSVGAKKLG
WRYSSIPRNVKNCNMLGYCGLGCPIDAKQSQLVTTIPSALKEKTSLLYNTKALRYVWKDNKIDHLYCLPSTKGTDTQPKI
RLFAKHFITSAGAINSPALLLRSQLPDPYQLIGKRTFVQLHNYSVAEMPTPVYGFFGAPQSVASDEFLWKEGVTGKAGYN
IEAVGAQPIVLMNLRKLVGEEFEQYVKSYPNLHVLVSQIRDGFSEESIGGTVRLNEEGYPILDYPLNDFIVDGIRRSYLS
MAECQFAAGAKTVVPANNAVNPFSSWSEAKKGIEKMVIQSPNTVVNSTHPLGGNAMGNSQETSVVDPNGKFHHLTNLSVI
DGSIFPTSLGVNPSFTIYAIASKLATKLAKEFK

Sequences:

>Translated_513_residues
MDKLIDVSYLKKDLDLEADFVIVGSGAGGGTSAEILAKAGYSVIIVEEGNYERSKDFDLKELSTFNRLYFEGATRPTKDK
GFTVVQGRTVGGSTVVNWTTCIKTPKETLQYWEKDLGINGFSEEEMETWFDVASKRFSIQPWEAHNQNNNLLSVGAKKLG
WRYSSIPRNVKNCNMLGYCGLGCPIDAKQSQLVTTIPSALKEKTSLLYNTKALRYVWKDNKIDHLYCLPSTKGTDTQPKI
RLFAKHFITSAGAINSPALLLRSQLPDPYQLIGKRTFVQLHNYSVAEMPTPVYGFFGAPQSVASDEFLWKEGVTGKAGYN
IEAVGAQPIVLMNLRKLVGEEFEQYVKSYPNLHVLVSQIRDGFSEESIGGTVRLNEEGYPILDYPLNDFIVDGIRRSYLS
MAECQFAAGAKTVVPANNAVNPFSSWSEAKKGIEKMVIQSPNTVVNSTHPLGGNAMGNSQETSVVDPNGKFHHLTNLSVI
DGSIFPTSLGVNPSFTIYAIASKLATKLAKEFK
>Mature_513_residues
MDKLIDVSYLKKDLDLEADFVIVGSGAGGGTSAEILAKAGYSVIIVEEGNYERSKDFDLKELSTFNRLYFEGATRPTKDK
GFTVVQGRTVGGSTVVNWTTCIKTPKETLQYWEKDLGINGFSEEEMETWFDVASKRFSIQPWEAHNQNNNLLSVGAKKLG
WRYSSIPRNVKNCNMLGYCGLGCPIDAKQSQLVTTIPSALKEKTSLLYNTKALRYVWKDNKIDHLYCLPSTKGTDTQPKI
RLFAKHFITSAGAINSPALLLRSQLPDPYQLIGKRTFVQLHNYSVAEMPTPVYGFFGAPQSVASDEFLWKEGVTGKAGYN
IEAVGAQPIVLMNLRKLVGEEFEQYVKSYPNLHVLVSQIRDGFSEESIGGTVRLNEEGYPILDYPLNDFIVDGIRRSYLS
MAECQFAAGAKTVVPANNAVNPFSSWSEAKKGIEKMVIQSPNTVVNSTHPLGGNAMGNSQETSVVDPNGKFHHLTNLSVI
DGSIFPTSLGVNPSFTIYAIASKLATKLAKEFK

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GMC oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000172
- InterPro:   IPR007867 [H]

Pfam domain/function: PF05199 GMC_oxred_C; PF00732 GMC_oxred_N [H]

EC number: NA

Molecular weight: Translated: 56615; Mature: 56615

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLIDVSYLKKDLDLEADFVIVGSGAGGGTSAEILAKAGYSVIIVEEGNYERSKDFDLK
CCCCCCHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCHH
ELSTFNRLYFEGATRPTKDKGFTVVQGRTVGGSTVVNWTTCIKTPKETLQYWEKDLGING
HHHHHHHHEECCCCCCCCCCCEEEEEEEECCCCEEEEHHHHHCCHHHHHHHHHHHCCCCC
FSEEEMETWFDVASKRFSIQPWEAHNQNNNLLSVGAKKLGWRYSSIPRNVKNCNMLGYCG
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECHHHHCCCHHHCCCCCCCCCEEEECC
LGCPIDAKQSQLVTTIPSALKEKTSLLYNTKALRYVWKDNKIDHLYCLPSTKGTDTQPKI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCEEEECCCCCCCCCCHHH
RLFAKHFITSAGAINSPALLLRSQLPDPYQLIGKRTFVQLHNYSVAEMPTPVYGFFGAPQ
HHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHCCEEEEEEECCCHHHCCCCCEEECCCCH
SVASDEFLWKEGVTGKAGYNIEAVGAQPIVLMNLRKLVGEEFEQYVKSYPNLHVLVSQIR
HHCCCCHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
DGFSEESIGGTVRLNEEGYPILDYPLNDFIVDGIRRSYLSMAECQFAAGAKTVVPANNAV
CCCCCCCCCCEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCC
NPFSSWSEAKKGIEKMVIQSPNTVVNSTHPLGGNAMGNSQETSVVDPNGKFHHLTNLSVI
CCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEEEE
DGSIFPTSLGVNPSFTIYAIASKLATKLAKEFK
CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDKLIDVSYLKKDLDLEADFVIVGSGAGGGTSAEILAKAGYSVIIVEEGNYERSKDFDLK
CCCCCCHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCHH
ELSTFNRLYFEGATRPTKDKGFTVVQGRTVGGSTVVNWTTCIKTPKETLQYWEKDLGING
HHHHHHHHEECCCCCCCCCCCEEEEEEEECCCCEEEEHHHHHCCHHHHHHHHHHHCCCCC
FSEEEMETWFDVASKRFSIQPWEAHNQNNNLLSVGAKKLGWRYSSIPRNVKNCNMLGYCG
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECHHHHCCCHHHCCCCCCCCCEEEECC
LGCPIDAKQSQLVTTIPSALKEKTSLLYNTKALRYVWKDNKIDHLYCLPSTKGTDTQPKI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCEEEECCCCCCCCCCHHH
RLFAKHFITSAGAINSPALLLRSQLPDPYQLIGKRTFVQLHNYSVAEMPTPVYGFFGAPQ
HHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHCCEEEEEEECCCHHHCCCCCEEECCCCH
SVASDEFLWKEGVTGKAGYNIEAVGAQPIVLMNLRKLVGEEFEQYVKSYPNLHVLVSQIR
HHCCCCHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
DGFSEESIGGTVRLNEEGYPILDYPLNDFIVDGIRRSYLSMAECQFAAGAKTVVPANNAV
CCCCCCCCCCEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCC
NPFSSWSEAKKGIEKMVIQSPNTVVNSTHPLGGNAMGNSQETSVVDPNGKFHHLTNLSVI
CCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEEEE
DGSIFPTSLGVNPSFTIYAIASKLATKLAKEFK
CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]