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The map label for this gene is bscR [H]

Identifier: 183219527

GI number: 183219527

Start: 101487

End: 102065

Strand: Reverse

Name: bscR [H]

Synonym: LEPBI_I0100

Alternate gene names: 183219527

Gene position: 102065-101487 (Counterclockwise)

Preceding gene: 183219538

Following gene: 183219525

Centisome position: 2.84

GC content: 36.79

Gene sequence:

>579_bases
TTGGTCGAAAAGGCTTCAAAATTGAATAAAAGCGAAGAAATCTTAACGGCAGCGTTAGAATTATTTACGGCGAAAGGTTT
TGATGGAACAGCAGTTCCTTTGATTGCAGAACGTGCCAATGTCGCTGCAGGTACCATCTATCGTTACTTTGCGAGTAAAG
AAGAACTTGTGAATTCACTCTTTCAAAAATGGCAAGAGAGTCTTTACAATAAAATCAAGGACAACTTCCCAGAGAATGTT
GAACCTAAGGAACAATTCCATCGGATTTGGTTATCAATGGCTGAATTCCAAAGGGAAAATCCAATCGCCTTCGATTTTTT
GGAGATGCAATACAACCTTCCTTATTTAGATAAAAAAAGTCTCGCAAAACGAGCATTACTACTAAAATTCTTAACACGAT
TTGCACATGATAATCGAGATATATTGATTAAGTTTCCACCAGATGCATTGATTGCGATTGTTTGGGGTGCTTTTGTTGGA
CTCGTGAAAGGTTCAAGGAACGGCAAAATCAAATTGGATGATCAATTTTTGAAAGAATCAGAAGATTTACTTTGGAATGC
GATCAAACTTCCAAATTAA

Upstream 100 bases:

>100_bases
TTTTTAAAAAAAGAATGAAAAGAATTGGATTGGGGGTATCTATGACCCCTATCCAAAAATGAACGTCCCTTATCAAAAGG
GATTTGGATAGGAATCCCCA

Downstream 100 bases:

>100_bases
GTTTTCCAAATTGATTTTTTTTATTTTGTTTCATCTAAAACTAAATCTACAAAAAATGAATATCCCAATTCGTTCACTCG
AGAAAATACAATGACTTTCT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MVEKASKLNKSEEILTAALELFTAKGFDGTAVPLIAERANVAAGTIYRYFASKEELVNSLFQKWQESLYNKIKDNFPENV
EPKEQFHRIWLSMAEFQRENPIAFDFLEMQYNLPYLDKKSLAKRALLLKFLTRFAHDNRDILIKFPPDALIAIVWGAFVG
LVKGSRNGKIKLDDQFLKESEDLLWNAIKLPN

Sequences:

>Translated_192_residues
MVEKASKLNKSEEILTAALELFTAKGFDGTAVPLIAERANVAAGTIYRYFASKEELVNSLFQKWQESLYNKIKDNFPENV
EPKEQFHRIWLSMAEFQRENPIAFDFLEMQYNLPYLDKKSLAKRALLLKFLTRFAHDNRDILIKFPPDALIAIVWGAFVG
LVKGSRNGKIKLDDQFLKESEDLLWNAIKLPN
>Mature_192_residues
MVEKASKLNKSEEILTAALELFTAKGFDGTAVPLIAERANVAAGTIYRYFASKEELVNSLFQKWQESLYNKIKDNFPENV
EPKEQFHRIWLSMAEFQRENPIAFDFLEMQYNLPYLDKKSLAKRALLLKFLTRFAHDNRDILIKFPPDALIAIVWGAFVG
LVKGSRNGKIKLDDQFLKESEDLLWNAIKLPN

Specific function: Negatively regulates the transcription of the bscR- CYP102A3 operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 22143; Mature: 22143

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEKASKLNKSEEILTAALELFTAKGFDGTAVPLIAERANVAAGTIYRYFASKEELVNSL
CCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHCCHHHHHHHH
FQKWQESLYNKIKDNFPENVEPKEQFHRIWLSMAEFQRENPIAFDFLEMQYNLPYLDKKS
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCCCCCCHHH
LAKRALLLKFLTRFAHDNRDILIKFPPDALIAIVWGAFVGLVKGSRNGKIKLDDQFLKES
HHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHH
EDLLWNAIKLPN
HHHHHHHHCCCC
>Mature Secondary Structure
MVEKASKLNKSEEILTAALELFTAKGFDGTAVPLIAERANVAAGTIYRYFASKEELVNSL
CCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHCCHHHHHHHH
FQKWQESLYNKIKDNFPENVEPKEQFHRIWLSMAEFQRENPIAFDFLEMQYNLPYLDKKS
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCCCCCCHHH
LAKRALLLKFLTRFAHDNRDILIKFPPDALIAIVWGAFVGLVKGSRNGKIKLDDQFLKES
HHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHH
EDLLWNAIKLPN
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]