Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183219525
Identifier: 183219525
GI number: 183219525
Start: 98787
End: 100142
Strand: Reverse
Name: 183219525
Synonym: LEPBI_I0098
Alternate gene names: NA
Gene position: 100142-98787 (Counterclockwise)
Preceding gene: 183219527
Following gene: 183219524
Centisome position: 2.78
GC content: 39.09
Gene sequence:
>1356_bases GTGATCCCCATCCTTAGACTCTCGCGCATGCGATACACCTACCTGCTACTTTTCCTTTTGTTACCAATCCTTCCTGCAAA TCCGCAATCGGGTGCAAAATTTCCAAACTTCTCTACACAAAACTCCGAAGTCAAAAATCCAAATCTTGCATGGCAAATCC AAAACCGAATCTCTCCCTCCATAGATGGACAAAATATTTTTAGCATCCAATACCACACGGATGGAAGGTCTGCTCTCATC GGGACAACTGATTTTTATATCTATCGAATTAGTTTGTTAGATGGGAGTATGATTTGGAAAACCGAAGCAAAGATGCATTA CCAAAAGGAATTTGATGGCCCAAAGATCTTCGATGTTTCACCTGATGGAAAAACTTTTTTAAGTTTTGGTCAAACCGATC CGAACTCACAATCTTCTGAACGATACTTAGTGATGCGTTCCTCAACGAACGGGAGTATCACCAAATCTTTCACAGCCGAA AATTCTCTTTTTTATTCCATAACAGCAGACATCGACTATCGATACCCAGGTGATGAGAGTAAAACAAACAGAGAAGAAGC AGGACTTTCACCGAACTGGATCCTCACCATTGACAATGCCAAATTCATTGAAAATGGAAAAAAGATATTAGTTTCCTACA AACATAATATGGAAGGACCCCATTTTTATGACCGTAGGCTCATCATCTATGATTCTATATCTGGAGAAAAATTAAACGAC TTTCAATTAACAGCGGATCCAAATAGTGCCGATTGGACCCAACCTGCAGGATTTGAAATCGCTCACCTCCAATTTCCTTA CCAATATGTAAATAAACGTAATTCGATTATTTATGGAAATGCTCATGGCAGAATCCATGAAATCACTCCATCAATCATGA ATCAAAACATGAGTATGGAAATCGTAGAAGAAAAACCAGCAGGCCCCATCGTATACATTCCACGAAGTGATTCGGAAGAT TTGGAAACAAAAGATAGACAAACAATACGATCGGTTGCCATCACACCGGATGGAAACTATCTCTATTGTTCTGCAGGAGT GGAAACTGGATTCATACAATTTTATGGATTCAATTTAGCGACGAAAAAGGAAATGTTTCGATCAACATTTTTTGATGCAG GAGAAATTTATGCCCCATCCAACCAAATTTTAATCATTGGTGGTCTCTATTCGTCAGGTAAATTTTACATCGTGGATACA CAAAAAGGAGAACTATTATTTGCTTCCAATGATGATGACAATTACATTCATCCCCATCTATTTAGTGTCCATCCCAAACA AAAAGAAGTCCTAGCACTTTCCACTGGCAATCAAATCGTCATTCTACGTCCGCAAGGAGGGACAACTCCATGGTAA
Upstream 100 bases:
>100_bases GTCTGTTTTAACAGATATAAATTCAATAAATTATACATTTTTCATCTAGGATGGAATCCATTTCAGGTGAATTTTCCCTT TTTGTGGAAGTCTTGACCAA
Downstream 100 bases:
>100_bases TCCCATCAATTCGTTTCCAAACTTTCATCAGTGTCCTAATCATATTCTTATCGCTGAACACAATGGATGCGAACGATCTC AATCTTTCTGTGATGAGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MIPILRLSRMRYTYLLLFLLLPILPANPQSGAKFPNFSTQNSEVKNPNLAWQIQNRISPSIDGQNIFSIQYHTDGRSALI GTTDFYIYRISLLDGSMIWKTEAKMHYQKEFDGPKIFDVSPDGKTFLSFGQTDPNSQSSERYLVMRSSTNGSITKSFTAE NSLFYSITADIDYRYPGDESKTNREEAGLSPNWILTIDNAKFIENGKKILVSYKHNMEGPHFYDRRLIIYDSISGEKLND FQLTADPNSADWTQPAGFEIAHLQFPYQYVNKRNSIIYGNAHGRIHEITPSIMNQNMSMEIVEEKPAGPIVYIPRSDSED LETKDRQTIRSVAITPDGNYLYCSAGVETGFIQFYGFNLATKKEMFRSTFFDAGEIYAPSNQILIIGGLYSSGKFYIVDT QKGELLFASNDDDNYIHPHLFSVHPKQKEVLALSTGNQIVILRPQGGTTPW
Sequences:
>Translated_451_residues MIPILRLSRMRYTYLLLFLLLPILPANPQSGAKFPNFSTQNSEVKNPNLAWQIQNRISPSIDGQNIFSIQYHTDGRSALI GTTDFYIYRISLLDGSMIWKTEAKMHYQKEFDGPKIFDVSPDGKTFLSFGQTDPNSQSSERYLVMRSSTNGSITKSFTAE NSLFYSITADIDYRYPGDESKTNREEAGLSPNWILTIDNAKFIENGKKILVSYKHNMEGPHFYDRRLIIYDSISGEKLND FQLTADPNSADWTQPAGFEIAHLQFPYQYVNKRNSIIYGNAHGRIHEITPSIMNQNMSMEIVEEKPAGPIVYIPRSDSED LETKDRQTIRSVAITPDGNYLYCSAGVETGFIQFYGFNLATKKEMFRSTFFDAGEIYAPSNQILIIGGLYSSGKFYIVDT QKGELLFASNDDDNYIHPHLFSVHPKQKEVLALSTGNQIVILRPQGGTTPW >Mature_451_residues MIPILRLSRMRYTYLLLFLLLPILPANPQSGAKFPNFSTQNSEVKNPNLAWQIQNRISPSIDGQNIFSIQYHTDGRSALI GTTDFYIYRISLLDGSMIWKTEAKMHYQKEFDGPKIFDVSPDGKTFLSFGQTDPNSQSSERYLVMRSSTNGSITKSFTAE NSLFYSITADIDYRYPGDESKTNREEAGLSPNWILTIDNAKFIENGKKILVSYKHNMEGPHFYDRRLIIYDSISGEKLND FQLTADPNSADWTQPAGFEIAHLQFPYQYVNKRNSIIYGNAHGRIHEITPSIMNQNMSMEIVEEKPAGPIVYIPRSDSED LETKDRQTIRSVAITPDGNYLYCSAGVETGFIQFYGFNLATKKEMFRSTFFDAGEIYAPSNQILIIGGLYSSGKFYIVDT QKGELLFASNDDDNYIHPHLFSVHPKQKEVLALSTGNQIVILRPQGGTTPW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51197; Mature: 51197
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPILRLSRMRYTYLLLFLLLPILPANPQSGAKFPNFSTQNSEVKNPNLAWQIQNRISPS CCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC IDGQNIFSIQYHTDGRSALIGTTDFYIYRISLLDGSMIWKTEAKMHYQKEFDGPKIFDVS CCCCEEEEEEEECCCCEEEEECCEEEEEEEEEECCCEEEEECCCEEEHHHCCCCEEEEEC PDGKTFLSFGQTDPNSQSSERYLVMRSSTNGSITKSFTAENSLFYSITADIDYRYPGDES CCCCEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCCEEEEEEEEEEEEECCCCCC KTNREEAGLSPNWILTIDNAKFIENGKKILVSYKHNMEGPHFYDRRLIIYDSISGEKLND CCCHHHCCCCCCEEEEECCCCEECCCEEEEEEEECCCCCCCEECCEEEEEECCCCCCCCC FQLTADPNSADWTQPAGFEIAHLQFPYQYVNKRNSIIYGNAHGRIHEITPSIMNQNMSME EEEEECCCCCCCCCCCCCEEEEEECCHHHHCCCCCEEEECCCCEEEECCHHHHCCCCEEE IVEEKPAGPIVYIPRSDSEDLETKDRQTIRSVAITPDGNYLYCSAGVETGFIQFYGFNLA EEECCCCCCEEEEECCCCCCCHHHHHHEEEEEEECCCCCEEEEECCCCCCEEEEEECCCH TKKEMFRSTFFDAGEIYAPSNQILIIGGLYSSGKFYIVDTQKGELLFASNDDDNYIHPHL HHHHHHHHHCCCCCEEECCCCCEEEEEEEECCCEEEEEECCCCCEEEECCCCCCEECCEE FSVHPKQKEVLALSTGNQIVILRPQGGTTPW EEECCCCCEEEEEECCCEEEEEECCCCCCCC >Mature Secondary Structure MIPILRLSRMRYTYLLLFLLLPILPANPQSGAKFPNFSTQNSEVKNPNLAWQIQNRISPS CCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC IDGQNIFSIQYHTDGRSALIGTTDFYIYRISLLDGSMIWKTEAKMHYQKEFDGPKIFDVS CCCCEEEEEEEECCCCEEEEECCEEEEEEEEEECCCEEEEECCCEEEHHHCCCCEEEEEC PDGKTFLSFGQTDPNSQSSERYLVMRSSTNGSITKSFTAENSLFYSITADIDYRYPGDES CCCCEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCCEEEEEEEEEEEEECCCCCC KTNREEAGLSPNWILTIDNAKFIENGKKILVSYKHNMEGPHFYDRRLIIYDSISGEKLND CCCHHHCCCCCCEEEEECCCCEECCCEEEEEEEECCCCCCCEECCEEEEEECCCCCCCCC FQLTADPNSADWTQPAGFEIAHLQFPYQYVNKRNSIIYGNAHGRIHEITPSIMNQNMSME EEEEECCCCCCCCCCCCCEEEEEECCHHHHCCCCCEEEECCCCEEEECCHHHHCCCCEEE IVEEKPAGPIVYIPRSDSEDLETKDRQTIRSVAITPDGNYLYCSAGVETGFIQFYGFNLA EEECCCCCCEEEEECCCCCCCHHHHHHEEEEEEECCCCCEEEEECCCCCCEEEEEECCCH TKKEMFRSTFFDAGEIYAPSNQILIIGGLYSSGKFYIVDTQKGELLFASNDDDNYIHPHL HHHHHHHHHCCCCCEEECCCCCEEEEEEEECCCEEEEEECCCCCEEEECCCCCCEECCEE FSVHPKQKEVLALSTGNQIVILRPQGGTTPW EEECCCCCEEEEEECCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA