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The map label for this gene is yrkP [H]

Identifier: 183219521

GI number: 183219521

Start: 95348

End: 96277

Strand: Direct

Name: yrkP [H]

Synonym: LEPBI_I0094

Alternate gene names: 183219521

Gene position: 95348-96277 (Clockwise)

Preceding gene: 183219520

Following gene: 183219526

Centisome position: 2.65

GC content: 37.63

Gene sequence:

>930_bases
ATGATCAATTTACTTGCTGTTGATGATGAAATGATCAATTTGATGATCATTGATGAATCTTTGTCTGACAAGGGATTCAC
TGTTGTAAAGGCAAAAGACGGGGAAGAAGCCTTTCAAATTTTGAGTTCAGGAGTCATGTTATTCCATGCCATCATTTTGG
ATCGATTGATGCCAAAAATGGATGGAATCGAACTCTTAAAAAAAATCAAACGATCTGAAAAATACCGCGATATCCCTGTA
ATCTTCCAAACAGCCATGAGTTCCATCACAGATATGACGGAAGGACTCGATGCAGGCGCATTTTATTATTTAACCAAACC
ATATTCACGAGCTTTACTTGTTCGAATTGTCCAAACAGCAGTTGAACATTTTATCAAATTACAGAGGGCCAAAGAAGACT
TACATAAAGGTATGGGAGCGCTTCGTCATATGGTCTCAGGTGAATTTCGGATTCGTTCGATTCGTGAATCACATGAACTA
GCACCACTACTTGCGAATGCTTGTCCCGATCCTGAGCGTGTGTTAACTGGTATCATGGAAATTCTCAATAATGCGATTGA
ACACGGCAATTTAGGAATTTCTTACCAAGAAAAATCAGAACTCCATGATAATGATAAATTGATGGAAGAAATTTTCAGAA
GACTTGATACTCCTGAATACAAAGACAAATTTGTAAAGGTTAGTTTTGAACGAAACGAAGAAAGAATCGAAATTCGCATC
AGTGACCAAGGAAAAGGATTTGATTGGAAACGGTTTTTATCCATTGAAGCCATGACAAAAAATGCGTTCAAAACGCACGG
CCGTGGAATCTTTATGGCCAAAAAATTATCATTTGATGATCTAACTTACATCGATGAAGGAAGAACTGCAATCATTCGCA
TCGACTTAACAAACAAAACGAGTAATTTGCTCACTGACTTCCAGGAATGA

Upstream 100 bases:

>100_bases
AAATAGTGAATGATCATAACGGCTTGTTGTATGCAGAAAATCATGAAGAAAAGGGAGCCGTATTTACCATGTTAATACCA
TGTTCCCGTGAAGGAATTCG

Downstream 100 bases:

>100_bases
TTTTATAAAGCAAACACCATAGGATCGGTAAAATCAAAAATAATTTGATTCACATGAGGTTTGAGTTCGTCCTTTGTATG
CGAAGTGGCCACTCCCAAAA

Product: putative two-component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MINLLAVDDEMINLMIIDESLSDKGFTVVKAKDGEEAFQILSSGVMLFHAIILDRLMPKMDGIELLKKIKRSEKYRDIPV
IFQTAMSSITDMTEGLDAGAFYYLTKPYSRALLVRIVQTAVEHFIKLQRAKEDLHKGMGALRHMVSGEFRIRSIRESHEL
APLLANACPDPERVLTGIMEILNNAIEHGNLGISYQEKSELHDNDKLMEEIFRRLDTPEYKDKFVKVSFERNEERIEIRI
SDQGKGFDWKRFLSIEAMTKNAFKTHGRGIFMAKKLSFDDLTYIDEGRTAIIRIDLTNKTSNLLTDFQE

Sequences:

>Translated_309_residues
MINLLAVDDEMINLMIIDESLSDKGFTVVKAKDGEEAFQILSSGVMLFHAIILDRLMPKMDGIELLKKIKRSEKYRDIPV
IFQTAMSSITDMTEGLDAGAFYYLTKPYSRALLVRIVQTAVEHFIKLQRAKEDLHKGMGALRHMVSGEFRIRSIRESHEL
APLLANACPDPERVLTGIMEILNNAIEHGNLGISYQEKSELHDNDKLMEEIFRRLDTPEYKDKFVKVSFERNEERIEIRI
SDQGKGFDWKRFLSIEAMTKNAFKTHGRGIFMAKKLSFDDLTYIDEGRTAIIRIDLTNKTSNLLTDFQE
>Mature_309_residues
MINLLAVDDEMINLMIIDESLSDKGFTVVKAKDGEEAFQILSSGVMLFHAIILDRLMPKMDGIELLKKIKRSEKYRDIPV
IFQTAMSSITDMTEGLDAGAFYYLTKPYSRALLVRIVQTAVEHFIKLQRAKEDLHKGMGALRHMVSGEFRIRSIRESHEL
APLLANACPDPERVLTGIMEILNNAIEHGNLGISYQEKSELHDNDKLMEEIFRRLDTPEYKDKFVKVSFERNEERIEIRI
SDQGKGFDWKRFLSIEAMTKNAFKTHGRGIFMAKKLSFDDLTYIDEGRTAIIRIDLTNKTSNLLTDFQE

Specific function: Member of the two-component regulatory system yrkQ/yrkP [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=133, Percent_Identity=34.5864661654135, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1790299, Length=125, Percent_Identity=31.2, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1790437, Length=122, Percent_Identity=34.4262295081967, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI87082012, Length=166, Percent_Identity=28.3132530120482, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 35514; Mature: 35514

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINLLAVDDEMINLMIIDESLSDKGFTVVKAKDGEEAFQILSSGVMLFHAIILDRLMPKM
CEEEEEECCCEEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCC
DGIELLKKIKRSEKYRDIPVIFQTAMSSITDMTEGLDAGAFYYLTKPYSRALLVRIVQTA
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHH
VEHFIKLQRAKEDLHKGMGALRHMVSGEFRIRSIRESHELAPLLANACPDPERVLTGIME
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ILNNAIEHGNLGISYQEKSELHDNDKLMEEIFRRLDTPEYKDKFVKVSFERNEERIEIRI
HHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEEEEE
SDQGKGFDWKRFLSIEAMTKNAFKTHGRGIFMAKKLSFDDLTYIDEGRTAIIRIDLTNKT
CCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEECCCEEEEEEEECCCH
SNLLTDFQE
HHHHHCCCC
>Mature Secondary Structure
MINLLAVDDEMINLMIIDESLSDKGFTVVKAKDGEEAFQILSSGVMLFHAIILDRLMPKM
CEEEEEECCCEEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCC
DGIELLKKIKRSEKYRDIPVIFQTAMSSITDMTEGLDAGAFYYLTKPYSRALLVRIVQTA
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHH
VEHFIKLQRAKEDLHKGMGALRHMVSGEFRIRSIRESHELAPLLANACPDPERVLTGIME
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ILNNAIEHGNLGISYQEKSELHDNDKLMEEIFRRLDTPEYKDKFVKVSFERNEERIEIRI
HHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEEEEE
SDQGKGFDWKRFLSIEAMTKNAFKTHGRGIFMAKKLSFDDLTYIDEGRTAIIRIDLTNKT
CCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEECCCEEEEEEEECCCH
SNLLTDFQE
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]