Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183219516
Identifier: 183219516
GI number: 183219516
Start: 89314
End: 89814
Strand: Direct
Name: 183219516
Synonym: LEPBI_I0089
Alternate gene names: NA
Gene position: 89314-89814 (Clockwise)
Preceding gene: 183219515
Following gene: 183219517
Centisome position: 2.48
GC content: 41.52
Gene sequence:
>501_bases TTGGCACTCCTTCTCTTCTGTGCTGGGATCAAATCCAAAATCAAATACTTCTATTTTAGTGACTCAGAGATCAAAACAGT GACTTCTTTTGCAGAAGTGGTGTTACCTATAAACGAACCAGATATGCCAAATCTGGAAGAAGCAAATGTTATGCGAAGAT TAGATGAAGAATTATATTTTGTATCTGACGAAATCCAAGAAGACTTCCACTCCGCTGTGATGGTCCTTACCTATCTGCCA TTTTTGTATGGGAAGTTTCGCTTATTCTCCCAATTAGAAAAAGAAGAGCGGATACGGCTCCTTCAGATTTGGTCTGATAC AGATTCGGATATTGTTCGGGCTGTGGTGGGCAACTTAAAACTTTTGGTTTGTCTGGTTTACTACGGCCACAAATCCACTT GGGATTCGATATCTTACCCGGGACCTTTTGCTAGCCCTCCTGAAAAATGGAGCGAGGCTCGCCTCCACTATCAAAATTTA CTGAAAGGGAATGGAGACTAA
Upstream 100 bases:
>100_bases GATGCCTTTTTCCAAATGATGGGAAAACCAGTGAACAATTTGGTCAAAGAAGAAAAAATCCAAGGTAGGTTGTATGTATT CTCTCTCTAGAAAATCGTTT
Downstream 100 bases:
>100_bases GATGAAAAAAACAGGTATTTATCGAGATTTCCAAACATACCATCCAGGGGAAGTGGTGAAAGTAGATGTGGTTGTGATTG GTTCTGGTTGTGGTGGGGCA
Product: putative signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MALLLFCAGIKSKIKYFYFSDSEIKTVTSFAEVVLPINEPDMPNLEEANVMRRLDEELYFVSDEIQEDFHSAVMVLTYLP FLYGKFRLFSQLEKEERIRLLQIWSDTDSDIVRAVVGNLKLLVCLVYYGHKSTWDSISYPGPFASPPEKWSEARLHYQNL LKGNGD
Sequences:
>Translated_166_residues MALLLFCAGIKSKIKYFYFSDSEIKTVTSFAEVVLPINEPDMPNLEEANVMRRLDEELYFVSDEIQEDFHSAVMVLTYLP FLYGKFRLFSQLEKEERIRLLQIWSDTDSDIVRAVVGNLKLLVCLVYYGHKSTWDSISYPGPFASPPEKWSEARLHYQNL LKGNGD >Mature_165_residues ALLLFCAGIKSKIKYFYFSDSEIKTVTSFAEVVLPINEPDMPNLEEANVMRRLDEELYFVSDEIQEDFHSAVMVLTYLPF LYGKFRLFSQLEKEERIRLLQIWSDTDSDIVRAVVGNLKLLVCLVYYGHKSTWDSISYPGPFASPPEKWSEARLHYQNLL KGNGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19244; Mature: 19113
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLLFCAGIKSKIKYFYFSDSEIKTVTSFAEVVLPINEPDMPNLEEANVMRRLDEELYF CCCEEEEHHHHHHEEEEEECCCHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHH VSDEIQEDFHSAVMVLTYLPFLYGKFRLFSQLEKEERIRLLQIWSDTDSDIVRAVVGNLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHH LLVCLVYYGHKSTWDSISYPGPFASPPEKWSEARLHYQNLLKGNGD HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ALLLFCAGIKSKIKYFYFSDSEIKTVTSFAEVVLPINEPDMPNLEEANVMRRLDEELYF CCEEEEHHHHHHEEEEEECCCHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHH VSDEIQEDFHSAVMVLTYLPFLYGKFRLFSQLEKEERIRLLQIWSDTDSDIVRAVVGNLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHH LLVCLVYYGHKSTWDSISYPGPFASPPEKWSEARLHYQNLLKGNGD HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA