Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183219515
Identifier: 183219515
GI number: 183219515
Start: 88155
End: 89303
Strand: Direct
Name: 183219515
Synonym: LEPBI_I0088
Alternate gene names: NA
Gene position: 88155-89303 (Clockwise)
Preceding gene: 183219508
Following gene: 183219516
Centisome position: 2.45
GC content: 42.47
Gene sequence:
>1149_bases ATGCGTTTTTTTGTCGCCTTGTCTCTCTTTTTATCCATCGGTTTGATGACGATCCAATGCAAAAAACAACAGTTGGAATC ATCTGTCCTATCTGAATCACTACCCAAACCAAAACTATATCTCCAAAGGGAAGGGAAAGGCAAACGTGGGACGATCGTCG GATTAGAACCTTTCCTAAACCAATTCAGTTACGCCACAGAGGAAAGTTTTTATTCGAGTTTGCGGTTGTACTTCCAAGAA GCAAAAGACAACGAAGCAATCTTTGTCGACCGAACCATCTTTGTTTTGCCTGAGTACATCGGAACTTGGCTTGTTGTCAC GGCAGAAGACAAGTCAATCTTTGGCACAAAGACGATGTTAGAAGCGATGGAAGAATTGGTGAAACAAAACCTAGGTTCCT TTCTTTGGCACTATGGATTCAGTCCTTCCTATTCCACAGACCATTTAAAGGAAACACTCTTCCGAATGAAGGCCTGGCAA ATGACGGATCGATACCAGTCGGTATTTTCCAGGTTGGCTCGGGAATATAGAGTGGGAATCGTGGCAGGTTCCATTGTACT GCCCCACCCCAAAGTGGTAGAAGGAAAGATCACACCGACAGATGGGCCACTTCAAAATGTGAGTTTTTATTTTCATCCCG ACGGCCGAGTCGATGACCAAATTGTTCGTAAACTCTTTCCGATTGAAGAGGAGAAACAATTTTTAGTCGAAGGAAAGTTC AATGAAAATCCAATCTATCGCACCCCTCTTGGAAAATTATATACCATGGTTTGTGCTGATTCTTGGTTCCCGGAAGTGTA CAAGGAAATGGAAGAATCGGAAGCAGAAATTGTAGTGGTCCCTTCTTTTGTCGCACCGAAAGATGCCTGGGGTCAAAAAT GGAATGGTTACAACGGTTATGCGAATCCAAAAGATATAAATCCAAAGGATATTGGAACCATCACGGAGAAAATGGCTTGG AAAAAATATGCATTACTCGGCCGACTCAAAGACCCAGATGTAAAATTAGGAATCAATGTATTCTTTCGCGGAGAGATTTG GGATCTCACAGCAGGTGGTGATGCCTTTTTCCAAATGATGGGAAAACCAGTGAACAATTTGGTCAAAGAAGAAAAAATCC AAGGTAGGTTGTATGTATTCTCTCTCTAG
Upstream 100 bases:
>100_bases GAGCAGGTTTCTCTTTCATAGAATAAGGTCAAAATAAAAGAAAAAACTAAGAACACAATTAAATATTGTCTGAAACGAAG TTGTGTAGTAGATTTGGTGG
Downstream 100 bases:
>100_bases AAAATCGTTTTTGGCACTCCTTCTCTTCTGTGCTGGGATCAAATCCAAAATCAAATACTTCTATTTTAGTGACTCAGAGA TCAAAACAGTGACTTCTTTT
Product: putative signal peptide
Products: NA
Alternate protein names: Hydrolase Carbon-Nitrogen Family; Signal Peptide; Carbon-Nitrogen Hydrolase-Like Protein; Hydrolase
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MRFFVALSLFLSIGLMTIQCKKQQLESSVLSESLPKPKLYLQREGKGKRGTIVGLEPFLNQFSYATEESFYSSLRLYFQE AKDNEAIFVDRTIFVLPEYIGTWLVVTAEDKSIFGTKTMLEAMEELVKQNLGSFLWHYGFSPSYSTDHLKETLFRMKAWQ MTDRYQSVFSRLAREYRVGIVAGSIVLPHPKVVEGKITPTDGPLQNVSFYFHPDGRVDDQIVRKLFPIEEEKQFLVEGKF NENPIYRTPLGKLYTMVCADSWFPEVYKEMEESEAEIVVVPSFVAPKDAWGQKWNGYNGYANPKDINPKDIGTITEKMAW KKYALLGRLKDPDVKLGINVFFRGEIWDLTAGGDAFFQMMGKPVNNLVKEEKIQGRLYVFSL
Sequences:
>Translated_382_residues MRFFVALSLFLSIGLMTIQCKKQQLESSVLSESLPKPKLYLQREGKGKRGTIVGLEPFLNQFSYATEESFYSSLRLYFQE AKDNEAIFVDRTIFVLPEYIGTWLVVTAEDKSIFGTKTMLEAMEELVKQNLGSFLWHYGFSPSYSTDHLKETLFRMKAWQ MTDRYQSVFSRLAREYRVGIVAGSIVLPHPKVVEGKITPTDGPLQNVSFYFHPDGRVDDQIVRKLFPIEEEKQFLVEGKF NENPIYRTPLGKLYTMVCADSWFPEVYKEMEESEAEIVVVPSFVAPKDAWGQKWNGYNGYANPKDINPKDIGTITEKMAW KKYALLGRLKDPDVKLGINVFFRGEIWDLTAGGDAFFQMMGKPVNNLVKEEKIQGRLYVFSL >Mature_382_residues MRFFVALSLFLSIGLMTIQCKKQQLESSVLSESLPKPKLYLQREGKGKRGTIVGLEPFLNQFSYATEESFYSSLRLYFQE AKDNEAIFVDRTIFVLPEYIGTWLVVTAEDKSIFGTKTMLEAMEELVKQNLGSFLWHYGFSPSYSTDHLKETLFRMKAWQ MTDRYQSVFSRLAREYRVGIVAGSIVLPHPKVVEGKITPTDGPLQNVSFYFHPDGRVDDQIVRKLFPIEEEKQFLVEGKF NENPIYRTPLGKLYTMVCADSWFPEVYKEMEESEAEIVVVPSFVAPKDAWGQKWNGYNGYANPKDINPKDIGTITEKMAW KKYALLGRLKDPDVKLGINVFFRGEIWDLTAGGDAFFQMMGKPVNNLVKEEKIQGRLYVFSL
Specific function: Unknown
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43940; Mature: 43940
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFFVALSLFLSIGLMTIQCKKQQLESSVLSESLPKPKLYLQREGKGKRGTIVGLEPFLN CHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEHHHHHH QFSYATEESFYSSLRLYFQEAKDNEAIFVDRTIFVLPEYIGTWLVVTAEDKSIFGTKTML HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHEEEHHHHCCEEEEEECCCCCCHHHHHH EAMEELVKQNLGSFLWHYGFSPSYSTDHLKETLFRMKAWQMTDRYQSVFSRLAREYRVGI HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE VAGSIVLPHPKVVEGKITPTDGPLQNVSFYFHPDGRVDDQIVRKLFPIEEEKQFLVEGKF EECCEECCCCCEEECEECCCCCCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCEEEECCC NENPIYRTPLGKLYTMVCADSWFPEVYKEMEESEAEIVVVPSFVAPKDAWGQKWNGYNGY CCCCEEECCHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCCCHHCCCCCCCCCCC ANPKDINPKDIGTITEKMAWKKYALLGRLKDPDVKLGINVFFRGEIWDLTAGGDAFFQMM CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECEEEEEECCHHHHHHHH GKPVNNLVKEEKIQGRLYVFSL CCHHHHHHHHHHHCCEEEEEEC >Mature Secondary Structure MRFFVALSLFLSIGLMTIQCKKQQLESSVLSESLPKPKLYLQREGKGKRGTIVGLEPFLN CHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEHHHHHH QFSYATEESFYSSLRLYFQEAKDNEAIFVDRTIFVLPEYIGTWLVVTAEDKSIFGTKTML HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHEEEHHHHCCEEEEEECCCCCCHHHHHH EAMEELVKQNLGSFLWHYGFSPSYSTDHLKETLFRMKAWQMTDRYQSVFSRLAREYRVGI HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE VAGSIVLPHPKVVEGKITPTDGPLQNVSFYFHPDGRVDDQIVRKLFPIEEEKQFLVEGKF EECCEECCCCCEEECEECCCCCCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCEEEECCC NENPIYRTPLGKLYTMVCADSWFPEVYKEMEESEAEIVVVPSFVAPKDAWGQKWNGYNGY CCCCEEECCHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCCCHHCCCCCCCCCCC ANPKDINPKDIGTITEKMAWKKYALLGRLKDPDVKLGINVFFRGEIWDLTAGGDAFFQMM CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECEEEEEECCHHHHHHHH GKPVNNLVKEEKIQGRLYVFSL CCHHHHHHHHHHHCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA