Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183219502
Identifier: 183219502
GI number: 183219502
Start: 75537
End: 76259
Strand: Reverse
Name: 183219502
Synonym: LEPBI_I0075
Alternate gene names: NA
Gene position: 76259-75537 (Counterclockwise)
Preceding gene: 183219503
Following gene: 183219500
Centisome position: 2.12
GC content: 34.85
Gene sequence:
>723_bases ATGAATGCATTTGTTCTCGCAGCAGGATTTGGCAAACGAATGGGTTCACTTACAGAAAATACCCCGAAACCTCTCTTAAA AATACAATCCATTGCCTTACTTGATTATGCCTTGTATCTATTACACCTTTGGAATATTGAAAAAATATGGGTCAACACAC ATTATTTAGGCGAACAAATCAGAAGGCATTTACAAAACTTTAAAAACTTACAAATTGAAGTTTCTTTTGAAAGGAAGGAA ATTTTAGGAACGGCAGGTGGCATTCGAACTGCATTACCAGATGATTCTGTTTTCGAACCTATCTTACTCATTAATCCTGA TACCCTTCTCTTTCCGAATCCTCAATTTACACCTAAGTTAGGTTTAGCGAAACATTCGAAAATACATCTCTATCTGTTAC CAATTCCCGAAGGTGAATCTTATACAAAAATATCCATTGGCAAGGATCAAACTTTGGAATTTGGAAAAGGTAATTATTAT TATATTGGACTTGCTGTTTTGGATCCAATTTGTCTATCTAGTTTGGAAAAAAATCAGTATTACGATTTGTCAGATATATT TAAAGACCTTGCCAAACGAGGTGAGATCACCGGAGAAATTTTCCCCGGCGAAGTGTTAGATTTAGGAACAAAAGAACTTT GGGAAACTTACCAAACAAAAGATGTGTTTGGAAAATCACTCGAACAGATAAAAAGTTTTTTAGCTAAATCCAAGATGGCT TAG
Upstream 100 bases:
>100_bases AAATTATCCAATTAGGAATGTTTGCTGATTCACTTTTTATTTTTGTCAGAAGTTTGAGAGATGAACTAAACCACCATAAG GACTTTCGAAACTTAAATCT
Downstream 100 bases:
>100_bases GATTTCTTCCTTTCGTTTTTCATATCCTTTTTTACCCAACAGAGCAAACATATTATTTTTATAATCTTCGACACCGGGTT GGTCAAAAGGATTAACACCT
Product: putative nucleotide-diphospho-sugar transferase
Products: phosphate; GDPmannose
Alternate protein names: Nucleotidyltransferase Family Protein; Nucleotidyl Transferase Family Protein; Nucleoside-Diphosphate-Sugar Pyrophosphorylase; Mannose-1-Phosphate Guanylyltransferase; Nucleotidyl Transferase Superfamily; Nucleotidyltransferase; ADP-Glucose Pyrophosphorylase; Aminoglycoside Phosphotransferase; Nucleotidyl Transferase Superfamily Protein; Sugar-Phosphate Nucleotidyl Transferase; Nucleotide-Diphospho-Sugar Transferase
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MNAFVLAAGFGKRMGSLTENTPKPLLKIQSIALLDYALYLLHLWNIEKIWVNTHYLGEQIRRHLQNFKNLQIEVSFERKE ILGTAGGIRTALPDDSVFEPILLINPDTLLFPNPQFTPKLGLAKHSKIHLYLLPIPEGESYTKISIGKDQTLEFGKGNYY YIGLAVLDPICLSSLEKNQYYDLSDIFKDLAKRGEITGEIFPGEVLDLGTKELWETYQTKDVFGKSLEQIKSFLAKSKMA
Sequences:
>Translated_240_residues MNAFVLAAGFGKRMGSLTENTPKPLLKIQSIALLDYALYLLHLWNIEKIWVNTHYLGEQIRRHLQNFKNLQIEVSFERKE ILGTAGGIRTALPDDSVFEPILLINPDTLLFPNPQFTPKLGLAKHSKIHLYLLPIPEGESYTKISIGKDQTLEFGKGNYY YIGLAVLDPICLSSLEKNQYYDLSDIFKDLAKRGEITGEIFPGEVLDLGTKELWETYQTKDVFGKSLEQIKSFLAKSKMA >Mature_240_residues MNAFVLAAGFGKRMGSLTENTPKPLLKIQSIALLDYALYLLHLWNIEKIWVNTHYLGEQIRRHLQNFKNLQIEVSFERKE ILGTAGGIRTALPDDSVFEPILLINPDTLLFPNPQFTPKLGLAKHSKIHLYLLPIPEGESYTKISIGKDQTLEFGKGNYY YIGLAVLDPICLSSLEKNQYYDLSDIFKDLAKRGEITGEIFPGEVLDLGTKELWETYQTKDVFGKSLEQIKSFLAKSKMA
Specific function: Unknown
COG id: COG1208
COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.7.22
Molecular weight: Translated: 27227; Mature: 27227
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAFVLAAGFGKRMGSLTENTPKPLLKIQSIALLDYALYLLHLWNIEKIWVNTHYLGEQI CCEEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHH RRHLQNFKNLQIEVSFERKEILGTAGGIRTALPDDSVFEPILLINPDTLLFPNPQFTPKL HHHHHHHHCEEEEEEECHHHHHHCCCCCCCCCCCCCHHCCEEEECCCEEECCCCCCCCCC GLAKHSKIHLYLLPIPEGESYTKISIGKDQTLEFGKGNYYYIGLAVLDPICLSSLEKNQY CCCCCCEEEEEEEECCCCCCEEEEECCCCCCEEECCCCEEEEEHHHHHHHHHHHHCCCCC YDLSDIFKDLAKRGEITGEIFPGEVLDLGTKELWETYQTKDVFGKSLEQIKSFLAKSKMA CCHHHHHHHHHHCCCCCCEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNAFVLAAGFGKRMGSLTENTPKPLLKIQSIALLDYALYLLHLWNIEKIWVNTHYLGEQI CCEEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHH RRHLQNFKNLQIEVSFERKEILGTAGGIRTALPDDSVFEPILLINPDTLLFPNPQFTPKL HHHHHHHHCEEEEEEECHHHHHHCCCCCCCCCCCCCHHCCEEEECCCEEECCCCCCCCCC GLAKHSKIHLYLLPIPEGESYTKISIGKDQTLEFGKGNYYYIGLAVLDPICLSSLEKNQY CCCCCCEEEEEEEECCCCCCEEEEECCCCCCEEECCCCEEEEEHHHHHHHHHHHHCCCCC YDLSDIFKDLAKRGEITGEIFPGEVLDLGTKELWETYQTKDVFGKSLEQIKSFLAKSKMA CCHHHHHHHHHHCCCCCCEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GDP; alpha-D-mannose 1-phosphate
Specific reaction: GDP + alpha-D-mannose 1-phosphate = phosphate + GDP-mannose
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA