Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183219497
Identifier: 183219497
GI number: 183219497
Start: 70219
End: 71652
Strand: Reverse
Name: 183219497
Synonym: LEPBI_I0070
Alternate gene names: NA
Gene position: 71652-70219 (Counterclockwise)
Preceding gene: 183219499
Following gene: 183219496
Centisome position: 1.99
GC content: 38.77
Gene sequence:
>1434_bases ATGAAATCCAAAATCGTATCTATCACAAGTTTTACCCTTCTCTTTTTTGTCACAGCCAGCATCACCTCTGATAGTTCCTT CGATCTATCCACAGATTCCGATCGAAAATCAGTGAGTGTTACCATCTATAACGGAGGCATTGGCCTCGTAAGAGAAACAC GTGTTCTCAATTTAGCCAAAGGGATCCGCACCTTACGTTTTGAAGATGTCCCTTCACAAATCATTCCTCAAACGGTTCGA GTGAAAGGAGAAGACCCAAAAAAACTAACAGTGTTTGAACAAAACTACGAATACGATTTGATTTCGCCTGAACGTTTGAT GGACAAATACATTGGAAAAGAAGTGACCCTTTACCAAGACGGAAAAGAAAAAACTACTTCAGTCAAAGCAAAACTCATCG CCAATAACGGCAGTCCTGTTTACCAAATAGGAAACGAAGTATCACTGGGATACAATGGACGGGTCACAGTTCCTACAATT CCTGAAAATTTATTCGCTAAACCAACATTAGTTTGGAAATTAAAAAACGATACGGAAAAAGAACAATCTCTCGAAGTATC CTATCAAACCAATGGCCTCGGTTGGTCTGCCGATTACATTCTTGTTTTGGATAAAGACGAAAATGAATGTGGACTCAATT CTTGGGTCACTTTGAATAACAATTCAGGAGCCGAATTTAAAAATGCAGTTTTGCAATTGGTGGCAGGAAAGGTCAATTTA CTCTCCAACCGCCCCGCTTACTCACCACAACCTCGTTATGCGAAAAAAACCATGGTAAAGGAATATGATGAAGTGTCAGA AGCTGCACCTGAGTTTAACCAAGAAAATCTTTCCGAGTATTATTTATATACCTTGGACCAACCAACAACCATTGGTTATA ACCAAACCAAACAAGTGCAACTTTTCCAATCTGAAGGGATCGAAATCAAAAAATACTTTGTATTTGAAAACCTTCCGATG TACGAAGGAAATGAAAAAAATTTCAACAACGCTACCATTAAATACATTTTTAAAAATGCTAAAAAGAATAACTTAGGCCG ACCACTTCCGCAAGGCACCATCCGTGTGTTCAAAGCAGATTCCAAAGGCCGTCAACAATTGTTAGGTGAGGACACCATCG ATCACACTCCAGAGAATGAAGAAGTCAAAATCAAAACGGGCCAAGCGTTTGATGTTGTGGCAAATGGAAAACGACTCGCC TATGAAGTATTCAAACTCTCACGGGGTGAAAAGTCTTCCTATTCGGTTGAAATACGTAATAGAAAAAAAGAACCGATTGA AATTCGATTTTATGCAAGTTTATGGGGAGATTGGAACATTACCAAATCATCTCATAAATTCACAAAAGAATCCTCAACCA AAACATATGCTGATGTTCCACTGAAAGCAAATGAAGTGGTCACTTTAGAATACACGGTTGAAACCAAGTACTAA
Upstream 100 bases:
>100_bases TTTGCCATATGAATCCTCTTAAAGTGCAGTTTTCCCCTAACGATTTTGGTTGCATTCGTTTTTTAAGTCTCCAGACTGTA GAATGCTCATGGGAGAGTAC
Downstream 100 bases:
>100_bases ACATGGAAACAAAGTACGATGCCATCATCATTGGATCGGGAATCGGCGGGCTCACTGCCGCTTCCATTTTGTCACAAGTC GCTAACAAAAAAGTTTTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 477; Mature: 477
Protein sequence:
>477_residues MKSKIVSITSFTLLFFVTASITSDSSFDLSTDSDRKSVSVTIYNGGIGLVRETRVLNLAKGIRTLRFEDVPSQIIPQTVR VKGEDPKKLTVFEQNYEYDLISPERLMDKYIGKEVTLYQDGKEKTTSVKAKLIANNGSPVYQIGNEVSLGYNGRVTVPTI PENLFAKPTLVWKLKNDTEKEQSLEVSYQTNGLGWSADYILVLDKDENECGLNSWVTLNNNSGAEFKNAVLQLVAGKVNL LSNRPAYSPQPRYAKKTMVKEYDEVSEAAPEFNQENLSEYYLYTLDQPTTIGYNQTKQVQLFQSEGIEIKKYFVFENLPM YEGNEKNFNNATIKYIFKNAKKNNLGRPLPQGTIRVFKADSKGRQQLLGEDTIDHTPENEEVKIKTGQAFDVVANGKRLA YEVFKLSRGEKSSYSVEIRNRKKEPIEIRFYASLWGDWNITKSSHKFTKESSTKTYADVPLKANEVVTLEYTVETKY
Sequences:
>Translated_477_residues MKSKIVSITSFTLLFFVTASITSDSSFDLSTDSDRKSVSVTIYNGGIGLVRETRVLNLAKGIRTLRFEDVPSQIIPQTVR VKGEDPKKLTVFEQNYEYDLISPERLMDKYIGKEVTLYQDGKEKTTSVKAKLIANNGSPVYQIGNEVSLGYNGRVTVPTI PENLFAKPTLVWKLKNDTEKEQSLEVSYQTNGLGWSADYILVLDKDENECGLNSWVTLNNNSGAEFKNAVLQLVAGKVNL LSNRPAYSPQPRYAKKTMVKEYDEVSEAAPEFNQENLSEYYLYTLDQPTTIGYNQTKQVQLFQSEGIEIKKYFVFENLPM YEGNEKNFNNATIKYIFKNAKKNNLGRPLPQGTIRVFKADSKGRQQLLGEDTIDHTPENEEVKIKTGQAFDVVANGKRLA YEVFKLSRGEKSSYSVEIRNRKKEPIEIRFYASLWGDWNITKSSHKFTKESSTKTYADVPLKANEVVTLEYTVETKY >Mature_477_residues MKSKIVSITSFTLLFFVTASITSDSSFDLSTDSDRKSVSVTIYNGGIGLVRETRVLNLAKGIRTLRFEDVPSQIIPQTVR VKGEDPKKLTVFEQNYEYDLISPERLMDKYIGKEVTLYQDGKEKTTSVKAKLIANNGSPVYQIGNEVSLGYNGRVTVPTI PENLFAKPTLVWKLKNDTEKEQSLEVSYQTNGLGWSADYILVLDKDENECGLNSWVTLNNNSGAEFKNAVLQLVAGKVNL LSNRPAYSPQPRYAKKTMVKEYDEVSEAAPEFNQENLSEYYLYTLDQPTTIGYNQTKQVQLFQSEGIEIKKYFVFENLPM YEGNEKNFNNATIKYIFKNAKKNNLGRPLPQGTIRVFKADSKGRQQLLGEDTIDHTPENEEVKIKTGQAFDVVANGKRLA YEVFKLSRGEKSSYSVEIRNRKKEPIEIRFYASLWGDWNITKSSHKFTKESSTKTYADVPLKANEVVTLEYTVETKY
Specific function: Unknown
COG id: COG5316
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54191; Mature: 54191
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKIVSITSFTLLFFVTASITSDSSFDLSTDSDRKSVSVTIYNGGIGLVRETRVLNLAK CCCEEEEHHHHEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEHHHHHHHHH GIRTLRFEDVPSQIIPQTVRVKGEDPKKLTVFEQNYEYDLISPERLMDKYIGKEVTLYQD HHHEEEECCCCHHHCCCEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCEEEEEEC GKEKTTSVKAKLIANNGSPVYQIGNEVSLGYNGRVTVPTIPENLFAKPTLVWKLKNDTEK CCCCCCEEEEEEEECCCCEEEEECCEEEECCCCEEEECCCCHHHCCCCEEEEEECCCCCC EQSLEVSYQTNGLGWSADYILVLDKDENECGLNSWVTLNNNSGAEFKNAVLQLVAGKVNL CCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCEEE LSNRPAYSPQPRYAKKTMVKEYDEVSEAAPEFNQENLSEYYLYTLDQPTTIGYNQTKQVQ ECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEECCCCCCEEEE LFQSEGIEIKKYFVFENLPMYEGNEKNFNNATIKYIFKNAKKNNLGRPLPQGTIRVFKAD EEECCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECC SKGRQQLLGEDTIDHTPENEEVKIKTGQAFDVVANGKRLAYEVFKLSRGEKSSYSVEIRN CCHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEECCCHHEEEEHHHCCCCCCCEEEEEEC RKKEPIEIRFYASLWGDWNITKSSHKFTKESSTKTYADVPLKANEVVTLEYTVETKY CCCCCEEEEEEEEECCCCEEECCCCCCCCCCCCCEEEECCCCCCCEEEEEEEEEECC >Mature Secondary Structure MKSKIVSITSFTLLFFVTASITSDSSFDLSTDSDRKSVSVTIYNGGIGLVRETRVLNLAK CCCEEEEHHHHEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEHHHHHHHHH GIRTLRFEDVPSQIIPQTVRVKGEDPKKLTVFEQNYEYDLISPERLMDKYIGKEVTLYQD HHHEEEECCCCHHHCCCEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCEEEEEEC GKEKTTSVKAKLIANNGSPVYQIGNEVSLGYNGRVTVPTIPENLFAKPTLVWKLKNDTEK CCCCCCEEEEEEEECCCCEEEEECCEEEECCCCEEEECCCCHHHCCCCEEEEEECCCCCC EQSLEVSYQTNGLGWSADYILVLDKDENECGLNSWVTLNNNSGAEFKNAVLQLVAGKVNL CCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCEEE LSNRPAYSPQPRYAKKTMVKEYDEVSEAAPEFNQENLSEYYLYTLDQPTTIGYNQTKQVQ ECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEECCCCCCEEEE LFQSEGIEIKKYFVFENLPMYEGNEKNFNNATIKYIFKNAKKNNLGRPLPQGTIRVFKAD EEECCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECC SKGRQQLLGEDTIDHTPENEEVKIKTGQAFDVVANGKRLAYEVFKLSRGEKSSYSVEIRN CCHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEECCCHHEEEEHHHCCCCCCCEEEEEEC RKKEPIEIRFYASLWGDWNITKSSHKFTKESSTKTYADVPLKANEVVTLEYTVETKY CCCCCEEEEEEEEECCCCEEECCCCCCCCCCCCCEEEECCCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA