Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
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Accession | NC_010581 |
Length | 4,170,153 |
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The map label for this gene is 182677588
Identifier: 182677588
GI number: 182677588
Start: 662465
End: 663625
Strand: Direct
Name: 182677588
Synonym: Bind_0593
Alternate gene names: NA
Gene position: 662465-663625 (Clockwise)
Preceding gene: 182677587
Following gene: 182677591
Centisome position: 15.89
GC content: 57.28
Gene sequence:
>1161_bases ATGCCCCGTTTGCTGACGCTTTATCTGACCCGGCGGATCGCTCTCTCGGTTCTGATGATAGAGGCGAGCCTTTGTCTGCC GCTCGTCATGACCTCGCTGTTCAGCGCTTTGCCTCCGGCGGCGGTGCGTGGCGGCCTTATCTGGCCAGCTCTGCTCGGAA CCTTGCCGACCGTTCTCTATATCGCGTTGCCCATGGCGGTTGGGATCGCCATCGCGTTAGAATTCTATCGCATGGCCTCG GAAGGGATGATCGCTGTCCTTTATTCCCTGCGGCTCTCGGTCTGGTCGATCTGCCTGCCGGGTATTGTCATCGCCATGGT CTGCGTCTTTTTCGGCTATTTTGTCGCTTCCTTCGTTGCTCCGAATTATGTCGGACAGATGCATGATGTGGTCCACGTCA TCCGTAATTCGCTCAATCACCGCATGCTCGAGCCCGCCCATTTCTATACGTTCGATAACGGCTCGAAGACACTCTATTTC CAGCGCTGGCGATCGTCCGATGTCGTTTCGGGCATGTTCATTCACCAATTTTCCGACGAAAAGAAAGAAGAAGAGATCAT CACGGCTTCAATCGCGGAATTCCGCCGCAATGAGAATGGGGTCATGCTGGTTTTGAGCGACGGCTCGATTGAGAGCCGGC CCGAAGGCGCCACCGCCATCCATACGGCCCATTTCGATGAATATGTCATCCCCATCGACATGCAGGGAACGGGCGGCATG CCGAAACGCAATTGGCGCGGCGTCTTCGAAGTCCCAGCTCTGGAATTTTTTCGGGAAAGGCCGCAGCAGGCCGACGATCC GCGCCGTTTCTCCGAATGGACGAGCGAAGCGACGAAACGGTTCGCCGTTCCTTTTCTTGCCCTCAGCCATACCATACTTG CCATGGGTCTCGTCTTGACTTTGGCTAATGCAACGGGGCGCAGCACCAAGGCGGGGTTGACCGCCTTCATCGTCGTGCCG CTCGCCCATATTCTGATCCTGATCGGCGCTGAAACCCTGGTGCGGCAAGATCCGCGCCTCGTCTGGCTGGTCGGTTTGGC GATCGCGGCGGAATTGGGTGTGGGCTGCTATCTCCTCTACCGCAAGAATGCCAATTTCCTTATTCAGCGGCGCGCAGCGA CGGACTATCAACAAGGTGCCGAGGAATATCAGGGCGCGTGA
Upstream 100 bases:
>100_bases GTTTTCAACTTGCGGGGGTTATGCTCTAGTGTTCCCATGACGCGGGTCATGCCAAACCCTTTGAACAATGGCCGCGAGCG ATGATGAAGATCGAGGATTC
Downstream 100 bases:
>100_bases ACCGGCCTGTGAGACGGGTGAGGACGTTCATGGAGTGGCGTCCATGCACCGGTGCTTCGAAGACATGTCAAAATGCTTCT AAAGCGGGTGATACTTTAGG
Product: permease-like protein
Products: NA
Alternate protein names: Permease-Like Protein
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MPRLLTLYLTRRIALSVLMIEASLCLPLVMTSLFSALPPAAVRGGLIWPALLGTLPTVLYIALPMAVGIAIALEFYRMAS EGMIAVLYSLRLSVWSICLPGIVIAMVCVFFGYFVASFVAPNYVGQMHDVVHVIRNSLNHRMLEPAHFYTFDNGSKTLYF QRWRSSDVVSGMFIHQFSDEKKEEEIITASIAEFRRNENGVMLVLSDGSIESRPEGATAIHTAHFDEYVIPIDMQGTGGM PKRNWRGVFEVPALEFFRERPQQADDPRRFSEWTSEATKRFAVPFLALSHTILAMGLVLTLANATGRSTKAGLTAFIVVP LAHILILIGAETLVRQDPRLVWLVGLAIAAELGVGCYLLYRKNANFLIQRRAATDYQQGAEEYQGA
Sequences:
>Translated_386_residues MPRLLTLYLTRRIALSVLMIEASLCLPLVMTSLFSALPPAAVRGGLIWPALLGTLPTVLYIALPMAVGIAIALEFYRMAS EGMIAVLYSLRLSVWSICLPGIVIAMVCVFFGYFVASFVAPNYVGQMHDVVHVIRNSLNHRMLEPAHFYTFDNGSKTLYF QRWRSSDVVSGMFIHQFSDEKKEEEIITASIAEFRRNENGVMLVLSDGSIESRPEGATAIHTAHFDEYVIPIDMQGTGGM PKRNWRGVFEVPALEFFRERPQQADDPRRFSEWTSEATKRFAVPFLALSHTILAMGLVLTLANATGRSTKAGLTAFIVVP LAHILILIGAETLVRQDPRLVWLVGLAIAAELGVGCYLLYRKNANFLIQRRAATDYQQGAEEYQGA >Mature_385_residues PRLLTLYLTRRIALSVLMIEASLCLPLVMTSLFSALPPAAVRGGLIWPALLGTLPTVLYIALPMAVGIAIALEFYRMASE GMIAVLYSLRLSVWSICLPGIVIAMVCVFFGYFVASFVAPNYVGQMHDVVHVIRNSLNHRMLEPAHFYTFDNGSKTLYFQ RWRSSDVVSGMFIHQFSDEKKEEEIITASIAEFRRNENGVMLVLSDGSIESRPEGATAIHTAHFDEYVIPIDMQGTGGMP KRNWRGVFEVPALEFFRERPQQADDPRRFSEWTSEATKRFAVPFLALSHTILAMGLVLTLANATGRSTKAGLTAFIVVPL AHILILIGAETLVRQDPRLVWLVGLAIAAELGVGCYLLYRKNANFLIQRRAATDYQQGAEEYQGA
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42935; Mature: 42804
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLLTLYLTRRIALSVLMIEASLCLPLVMTSLFSALPPAAVRGGLIWPALLGTLPTVLY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHH IALPMAVGIAIALEFYRMASEGMIAVLYSLRLSVWSICLPGIVIAMVCVFFGYFVASFVA HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PNYVGQMHDVVHVIRNSLNHRMLEPAHFYTFDNGSKTLYFQRWRSSDVVSGMFIHQFSDE CHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEEECCCCCHHHHHHHHHHCCC KKEEEIITASIAEFRRNENGVMLVLSDGSIESRPEGATAIHTAHFDEYVIPIDMQGTGGM HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCC PKRNWRGVFEVPALEFFRERPQQADDPRRFSEWTSEATKRFAVPFLALSHTILAMGLVLT CCCCCCCEEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LANATGRSTKAGLTAFIVVPLAHILILIGAETLVRQDPRLVWLVGLAIAAELGVGCYLLY HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCEEEEE RKNANFLIQRRAATDYQQGAEEYQGA ECCCCEEEEEHHHCCHHHHHHHHCCC >Mature Secondary Structure PRLLTLYLTRRIALSVLMIEASLCLPLVMTSLFSALPPAAVRGGLIWPALLGTLPTVLY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHH IALPMAVGIAIALEFYRMASEGMIAVLYSLRLSVWSICLPGIVIAMVCVFFGYFVASFVA HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PNYVGQMHDVVHVIRNSLNHRMLEPAHFYTFDNGSKTLYFQRWRSSDVVSGMFIHQFSDE CHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEEECCCCCHHHHHHHHHHCCC KKEEEIITASIAEFRRNENGVMLVLSDGSIESRPEGATAIHTAHFDEYVIPIDMQGTGGM HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCC PKRNWRGVFEVPALEFFRERPQQADDPRRFSEWTSEATKRFAVPFLALSHTILAMGLVLT CCCCCCCEEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LANATGRSTKAGLTAFIVVPLAHILILIGAETLVRQDPRLVWLVGLAIAAELGVGCYLLY HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCEEEEE RKNANFLIQRRAATDYQQGAEEYQGA ECCCCEEEEEHHHCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA