Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
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Accession | NC_010581 |
Length | 4,170,153 |
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The map label for this gene is 182677587
Identifier: 182677587
GI number: 182677587
Start: 661447
End: 662301
Strand: Direct
Name: 182677587
Synonym: Bind_0592
Alternate gene names: NA
Gene position: 661447-662301 (Clockwise)
Preceding gene: 182677576
Following gene: 182677588
Centisome position: 15.86
GC content: 54.62
Gene sequence:
>855_bases ATGCTTCAAGCCCCGACGCAGAAAAATTATGGCATAGCCGTCATCGCCAACGACAAGATCATCGACTGGCTGCTTCCTTT TCTCGAAAGTTATCTGGCCACGAACGCGACACTTCCACTTTATATCATCCCCTACGACGATAACATCTCCCTGACGCGGA AGGCGGCGGAAATTTACGGGGTCACGGTCGTCGATCCCGATAGTGTCGCGCTCGACGCTCTGGCCAAACGGCTCTATCCG CTTTCGCCGGGTCATCGTCGTCGTTTGCGCAAATTCCTGTCGCTTGCCCTGCCGCTCGACGAGGTGATTTATCTCGACGT CGATATCGTCCTGTTCCGGGACATGCGGGAGATGTTCGGCCGGCTCGAAGCGGGCAAGGCGGAATTCATCGTTGCCGCGC AAACCAGTGAAAATGACTTCGTCTATAATAAGAAGCGGGCGGATTATGATTTTCTGCGTGAAGCCCTGACGTTCAATGAC GGGTTTTTTCTCACATCGAACCGTCTGCTTTCCTTGCAGGATTTTTACGACATCATCGATCGCGACGAAAAGATCTTCCA CCGCGTGCGCGAGCGCGGCGGCCTTTATGCGCAGCCGGTGACCAATTTCGTCGTCCATCGGAAGGGACTGAAAGTCCTGT CGTTCTGGGATTGGGTCGAGGGTGCCTCGGGCGAGAGCTTCTACAAGGCTGAAGGCGTGACTTTCGATGCGGAAGGTCCT CGCGATCATTGTGGCAATAAAATTTATTTCGCCCATTGGTCCGGTATGAAGGACGCGCATTTGATGGGCCAGCGGGCTTT CGATGCGGCTTGGCGCGATTTTTCGCAAAAGGCTCATGCCCGGGCGAAATTCTAG
Upstream 100 bases:
>100_bases ATTGCGCGCCTGTAGAGGCTCGGCTTGAAAAGCCGCCGAGAACGCGGCATGTGTGGCGCACGTTTGCCGCAGCTTCATGT CCCTTGCCGAATAGAGATCC
Downstream 100 bases:
>100_bases CCGTAGTTTGGCCGCATAGATCCCGTCTGCACAATCACCGTAGGCGCCCGATCCTATCCCAATGTTTTCAACTTGCGGGG GTTATGCTCTAGTGTTCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MLQAPTQKNYGIAVIANDKIIDWLLPFLESYLATNATLPLYIIPYDDNISLTRKAAEIYGVTVVDPDSVALDALAKRLYP LSPGHRRRLRKFLSLALPLDEVIYLDVDIVLFRDMREMFGRLEAGKAEFIVAAQTSENDFVYNKKRADYDFLREALTFND GFFLTSNRLLSLQDFYDIIDRDEKIFHRVRERGGLYAQPVTNFVVHRKGLKVLSFWDWVEGASGESFYKAEGVTFDAEGP RDHCGNKIYFAHWSGMKDAHLMGQRAFDAAWRDFSQKAHARAKF
Sequences:
>Translated_284_residues MLQAPTQKNYGIAVIANDKIIDWLLPFLESYLATNATLPLYIIPYDDNISLTRKAAEIYGVTVVDPDSVALDALAKRLYP LSPGHRRRLRKFLSLALPLDEVIYLDVDIVLFRDMREMFGRLEAGKAEFIVAAQTSENDFVYNKKRADYDFLREALTFND GFFLTSNRLLSLQDFYDIIDRDEKIFHRVRERGGLYAQPVTNFVVHRKGLKVLSFWDWVEGASGESFYKAEGVTFDAEGP RDHCGNKIYFAHWSGMKDAHLMGQRAFDAAWRDFSQKAHARAKF >Mature_284_residues MLQAPTQKNYGIAVIANDKIIDWLLPFLESYLATNATLPLYIIPYDDNISLTRKAAEIYGVTVVDPDSVALDALAKRLYP LSPGHRRRLRKFLSLALPLDEVIYLDVDIVLFRDMREMFGRLEAGKAEFIVAAQTSENDFVYNKKRADYDFLREALTFND GFFLTSNRLLSLQDFYDIIDRDEKIFHRVRERGGLYAQPVTNFVVHRKGLKVLSFWDWVEGASGESFYKAEGVTFDAEGP RDHCGNKIYFAHWSGMKDAHLMGQRAFDAAWRDFSQKAHARAKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32653; Mature: 32653
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQAPTQKNYGIAVIANDKIIDWLLPFLESYLATNATLPLYIIPYDDNISLTRKAAEIYG CCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHEE VTVVDPDSVALDALAKRLYPLSPGHRRRLRKFLSLALPLDEVIYLDVDIVLFRDMREMFG EEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHH RLEAGKAEFIVAAQTSENDFVYNKKRADYDFLREALTFNDGFFLTSNRLLSLQDFYDIID HCCCCCEEEEEEEECCCCCEEECCCCCCHHHHHHHHHCCCCEEEECCCEEEHHHHHHHHC RDEKIFHRVRERGGLYAQPVTNFVVHRKGLKVLSFWDWVEGASGESFYKAEGVTFDAEGP CCHHHHHHHHHHCCEEECHHHHHHHHHCCCCEEEHHHHHCCCCCCCEEEECCEEECCCCC RDHCGNKIYFAHWSGMKDAHLMGQRAFDAAWRDFSQKAHARAKF HHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLQAPTQKNYGIAVIANDKIIDWLLPFLESYLATNATLPLYIIPYDDNISLTRKAAEIYG CCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHEE VTVVDPDSVALDALAKRLYPLSPGHRRRLRKFLSLALPLDEVIYLDVDIVLFRDMREMFG EEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHH RLEAGKAEFIVAAQTSENDFVYNKKRADYDFLREALTFNDGFFLTSNRLLSLQDFYDIID HCCCCCEEEEEEEECCCCCEEECCCCCCHHHHHHHHHCCCCEEEECCCEEEHHHHHHHHC RDEKIFHRVRERGGLYAQPVTNFVVHRKGLKVLSFWDWVEGASGESFYKAEGVTFDAEGP CCHHHHHHHHHHCCEEECHHHHHHHHHCCCCEEEHHHHHCCCCCCCEEEECCEEECCCCC RDHCGNKIYFAHWSGMKDAHLMGQRAFDAAWRDFSQKAHARAKF HHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA