Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
---|---|
Accession | NC_010581 |
Length | 4,170,153 |
Click here to switch to the map view.
The map label for this gene is 182677551
Identifier: 182677551
GI number: 182677551
Start: 616467
End: 617711
Strand: Direct
Name: 182677551
Synonym: Bind_0556
Alternate gene names: NA
Gene position: 616467-617711 (Clockwise)
Preceding gene: 182677541
Following gene: 182677558
Centisome position: 14.78
GC content: 56.39
Gene sequence:
>1245_bases ATGCGCGATCTGATCATTCTTTTTTGTACGCGGAGTCTTCGCCTTTTCGCGTTTGGCCTTGTTTCTGTCATCCTCGTCTT CTTTCTCGCAGAACGCGGGTTCACGACGAGTGAGGTGGGATGGCTCTTGAGTTTGACCCTCATCGGCGATGCCGTGATTT CTCTCTTCCTGACGACACGAGCGGATCGCTGGGGACGACGGCGGACACTCATGGTTAGTGGCCTTCTCATGGTCGTCGCA GGCCTCGCCGTCATCACTACGGGAAATTTCTGGCTCTTGGCTTTGGCGATGACGATCGGGGTGATTAGTCCAGCCGGCAA TGAAGTCGGGCCATTCCTCGCCGTGGAACAGGCCGCCTTGGCCCATATCGTCACGCCTCATCAGAGAACGCATTATGTCG CCTGGTATAACGTCGCTGGTTTCAGTGCGACGGCGCTGGGGGCTTTGGTGGGGGGAATTTTGTCCGGCTGGTGGCAAGGA AAGGGTGTGCCCGCTCTCTCGAGCTACACATATCTGTTTGGGGTTTACGCCGGCGTGGGGTTGCTCCTCGTCATTCTTTC CATGCGCTTGAGTGATGCTGTCGAGGTCGAACATAACCCGGTCAAGAACCGTGGCCTGATCGCCAATTGGACGGGATTAC ATGAATCGCGTTCGATCGTGCTTCGCCTGAGTGCTCTCTTCGCTCTCGATGCCTTTGCCGGCGGCTTTATCGTGCAAAGC ATTCTAGCCTATTGGTTTTACTTGAAATTTGGTGCGACGAACACCGAGCTGGGCGGCCTGTTTTTCGCGACCAATATTTT ATCCGGTATTTCGGCCCTGGTGGCGGTGCCTTTGGCCAGGCGTCTGGGGCTCGTCAACACAATGGTGTTCACACACCTCC CATCGAACCTGCTTTTGATGGCCGTCCCCCTCATGCCGAATTTCCAGCTCGCCGTGGGGCTTCTCTTGCTGCGCCATCTG ATCTCGCAGATGGATGTTCCTGCAAGGCAATCCTATGTGATGGCGGTGGTCGCGCCTTCCGAATATTCAGCGGCGAACGG CATTACCGCGACAGTCCGTTCCCTTGGCTCCGGGCTGGCGCCCTCCCTGGCCGGTGGTTTGCTGAGCGTTGCTCCCCTTG TCAACGCGCCTATTTTTTTAGCTGGCGGATTGAAGATTGTATACGATCTGGCGCTGTATCGTGGATTCAGCCATATCAAG CCGCCTGAAGAAATTGATGCCAAAACGGGCTCCCGGCCACGTTGA
Upstream 100 bases:
>100_bases GGATCGCGGGGCTCGTTGATTGCGCGATCATGCCGTAAAATTGGCCGGTTTCGGATTTCGGACTTCACCTCCATCTTGCC TCGGATGAGACCATTAACTC
Downstream 100 bases:
>100_bases TTTGTCATGGACGCGGCTGATCCCGTGTCCTGTATTGTCTCTGACCGATCGTGGTCATGACAGATCACACGGAACGGAAC CGCCAGACGCTGGTCTCCTT
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Transporter Protein; Transporter Facilitator Family; Multidrug Efflux Permease; Multidrug Resistance Protein NorA Related Protein; ABC Transporter Permease Protein; Sugar Transporter Related Protein; Transport Transmembrane Protein
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MRDLIILFCTRSLRLFAFGLVSVILVFFLAERGFTTSEVGWLLSLTLIGDAVISLFLTTRADRWGRRRTLMVSGLLMVVA GLAVITTGNFWLLALAMTIGVISPAGNEVGPFLAVEQAALAHIVTPHQRTHYVAWYNVAGFSATALGALVGGILSGWWQG KGVPALSSYTYLFGVYAGVGLLLVILSMRLSDAVEVEHNPVKNRGLIANWTGLHESRSIVLRLSALFALDAFAGGFIVQS ILAYWFYLKFGATNTELGGLFFATNILSGISALVAVPLARRLGLVNTMVFTHLPSNLLLMAVPLMPNFQLAVGLLLLRHL ISQMDVPARQSYVMAVVAPSEYSAANGITATVRSLGSGLAPSLAGGLLSVAPLVNAPIFLAGGLKIVYDLALYRGFSHIK PPEEIDAKTGSRPR
Sequences:
>Translated_414_residues MRDLIILFCTRSLRLFAFGLVSVILVFFLAERGFTTSEVGWLLSLTLIGDAVISLFLTTRADRWGRRRTLMVSGLLMVVA GLAVITTGNFWLLALAMTIGVISPAGNEVGPFLAVEQAALAHIVTPHQRTHYVAWYNVAGFSATALGALVGGILSGWWQG KGVPALSSYTYLFGVYAGVGLLLVILSMRLSDAVEVEHNPVKNRGLIANWTGLHESRSIVLRLSALFALDAFAGGFIVQS ILAYWFYLKFGATNTELGGLFFATNILSGISALVAVPLARRLGLVNTMVFTHLPSNLLLMAVPLMPNFQLAVGLLLLRHL ISQMDVPARQSYVMAVVAPSEYSAANGITATVRSLGSGLAPSLAGGLLSVAPLVNAPIFLAGGLKIVYDLALYRGFSHIK PPEEIDAKTGSRPR >Mature_414_residues MRDLIILFCTRSLRLFAFGLVSVILVFFLAERGFTTSEVGWLLSLTLIGDAVISLFLTTRADRWGRRRTLMVSGLLMVVA GLAVITTGNFWLLALAMTIGVISPAGNEVGPFLAVEQAALAHIVTPHQRTHYVAWYNVAGFSATALGALVGGILSGWWQG KGVPALSSYTYLFGVYAGVGLLLVILSMRLSDAVEVEHNPVKNRGLIANWTGLHESRSIVLRLSALFALDAFAGGFIVQS ILAYWFYLKFGATNTELGGLFFATNILSGISALVAVPLARRLGLVNTMVFTHLPSNLLLMAVPLMPNFQLAVGLLLLRHL ISQMDVPARQSYVMAVVAPSEYSAANGITATVRSLGSGLAPSLAGGLLSVAPLVNAPIFLAGGLKIVYDLALYRGFSHIK PPEEIDAKTGSRPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322584, Length=392, Percent_Identity=29.0816326530612, Blast_Score=168, Evalue=1e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44355; Mature: 44355
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: PS50850 MFS ; PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDLIILFCTRSLRLFAFGLVSVILVFFLAERGFTTSEVGWLLSLTLIGDAVISLFLTTR CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ADRWGRRRTLMVSGLLMVVAGLAVITTGNFWLLALAMTIGVISPAGNEVGPFLAVEQAAL HHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH AHIVTPHQRTHYVAWYNVAGFSATALGALVGGILSGWWQGKGVPALSSYTYLFGVYAGVG HHHCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH LLLVILSMRLSDAVEVEHNPVKNRGLIANWTGLHESRSIVLRLSALFALDAFAGGFIVQS HHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ILAYWFYLKFGATNTELGGLFFATNILSGISALVAVPLARRLGLVNTMVFTHLPSNLLLM HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE AVPLMPNFQLAVGLLLLRHLISQMDVPARQSYVMAVVAPSEYSAANGITATVRSLGSGLA EECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCC PSLAGGLLSVAPLVNAPIFLAGGLKIVYDLALYRGFSHIKPPEEIDAKTGSRPR HHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCC >Mature Secondary Structure MRDLIILFCTRSLRLFAFGLVSVILVFFLAERGFTTSEVGWLLSLTLIGDAVISLFLTTR CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ADRWGRRRTLMVSGLLMVVAGLAVITTGNFWLLALAMTIGVISPAGNEVGPFLAVEQAAL HHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH AHIVTPHQRTHYVAWYNVAGFSATALGALVGGILSGWWQGKGVPALSSYTYLFGVYAGVG HHHCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH LLLVILSMRLSDAVEVEHNPVKNRGLIANWTGLHESRSIVLRLSALFALDAFAGGFIVQS HHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ILAYWFYLKFGATNTELGGLFFATNILSGISALVAVPLARRLGLVNTMVFTHLPSNLLLM HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE AVPLMPNFQLAVGLLLLRHLISQMDVPARQSYVMAVVAPSEYSAANGITATVRSLGSGLA EECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCC PSLAGGLLSVAPLVNAPIFLAGGLKIVYDLALYRGFSHIKPPEEIDAKTGSRPR HHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA