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The map label for this gene is virR [H]

Identifier: 182677558

GI number: 182677558

Start: 624126

End: 624563

Strand: Direct

Name: virR [H]

Synonym: Bind_0563

Alternate gene names: 182677558

Gene position: 624126-624563 (Clockwise)

Preceding gene: 182677551

Following gene: 182677560

Centisome position: 14.97

GC content: 59.82

Gene sequence:

>438_bases
GTGGATGCAACTATAAGAGAGGGTGAGAAAGCTGTCGATCCACCGCGAAATTTCGATGCTTCGCTCGTGTTCATCGGCAC
CATCCATACGCCCTGGCATGAACGCGGCGATTGTCCGCGCCAAGGCGATGAGGCGGGGCCCGATTGCCGGATCGATGTCG
ACCCGCATTGGCGCGAGGCTTTGGAGGGCATCGAGGCCTATTCGCGCCTTCAGGTTCTCTATTGGATGAACGAGGCGCGC
CGTGATCTTGTATTGCAATGGCCGCGCGGCGCCGAAAAACCATGCGGGACCTTTGCCTTGCGTTCACCGGTGCGGCCGAA
TCCGATCGCGTCTTCGATTGTCTTGCTGGTGCGAAGGGAAGGCACAAGTCTCATCGTTCGCGGTCTCGACTGCCGTGACG
GCACGCCGTTGCTGGATTTGAAGCCGCATCGAGGGTGA

Upstream 100 bases:

>100_bases
AACGCCAAAAGGTAAAAATCTGCATGGGAGAGACTTCTGAGAAGGATGCGCGCCGCGATGGCTTGATTTTCGGCGGCGGG
ACGATCGAGGGATTATTCGA

Downstream 100 bases:

>100_bases
GAGGGCTATAAGCAATTTTCGGTATATTTGCCGGAAGACGATATTTCATGAAGGCGATTGTGTCTTGCGTCCGGTGAACG
CCCAAAAGAAAGTGTTTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MDATIREGEKAVDPPRNFDASLVFIGTIHTPWHERGDCPRQGDEAGPDCRIDVDPHWREALEGIEAYSRLQVLYWMNEAR
RDLVLQWPRGAEKPCGTFALRSPVRPNPIASSIVLLVRREGTSLIVRGLDCRDGTPLLDLKPHRG

Sequences:

>Translated_145_residues
MDATIREGEKAVDPPRNFDASLVFIGTIHTPWHERGDCPRQGDEAGPDCRIDVDPHWREALEGIEAYSRLQVLYWMNEAR
RDLVLQWPRGAEKPCGTFALRSPVRPNPIASSIVLLVRREGTSLIVRGLDCRDGTPLLDLKPHRG
>Mature_145_residues
MDATIREGEKAVDPPRNFDASLVFIGTIHTPWHERGDCPRQGDEAGPDCRIDVDPHWREALEGIEAYSRLQVLYWMNEAR
RDLVLQWPRGAEKPCGTFALRSPVRPNPIASSIVLLVRREGTSLIVRGLDCRDGTPLLDLKPHRG

Specific function: Unknown

COG id: COG1720

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

Organism=Escherichia coli, GI1786393, Length=130, Percent_Identity=31.5384615384615, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001378 [H]

Pfam domain/function: PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 16362; Mature: 16362

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDATIREGEKAVDPPRNFDASLVFIGTIHTPWHERGDCPRQGDEAGPDCRIDVDPHWREA
CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHH
LEGIEAYSRLQVLYWMNEARRDLVLQWPRGAEKPCGTFALRSPVRPNPIASSIVLLVRRE
HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEECCCCCCCCHHHEEEEEEECC
GTSLIVRGLDCRDGTPLLDLKPHRG
CCEEEEEECCCCCCCCEEECCCCCC
>Mature Secondary Structure
MDATIREGEKAVDPPRNFDASLVFIGTIHTPWHERGDCPRQGDEAGPDCRIDVDPHWREA
CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHH
LEGIEAYSRLQVLYWMNEARRDLVLQWPRGAEKPCGTFALRSPVRPNPIASSIVLLVRRE
HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEECCCCCCCCHHHEEEEEEECC
GTSLIVRGLDCRDGTPLLDLKPHRG
CCEEEEEECCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA