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The map label for this gene is nifU [H]

Identifier: 182677480

GI number: 182677480

Start: 544521

End: 544841

Strand: Direct

Name: nifU [H]

Synonym: Bind_0484

Alternate gene names: 182677480

Gene position: 544521-544841 (Clockwise)

Preceding gene: 182677479

Following gene: 182677481

Centisome position: 13.06

GC content: 54.52

Gene sequence:

>321_bases
ATGTTGAATCCGGCGGAAAAAATAGTCGAAAAAGCTCCCGAAGAAGGGGCTGCTGAAGTCGTCTCCGATGCTGTTGCTGC
GGCGCGTCGCCAGCTCATTGCGGAAACGATCGAAAGCATTCGGCCGAATTTGCAGCGCGATAAAGGCGATTGCGAGCTGA
TCGATGTCCAGGGCGATAAGGTCTTTGTCAAAATGACCGGCGCCTGCGTTGGCTGTCAATTGTCCTCGATGACCTTGAAT
GGCGTTCAGGCCAAATTGGTCGAGGCGACTGGCCGCATGATCCGTGTCATTCCGGTCAGCCCTAATCTGCCCAAGCTGTA
A

Upstream 100 bases:

>100_bases
GACTTTGTCGAGAGCCTGGAAGGCGCGGGTTTCGTGTTCGAAAACCCAAATGCGACGAATTCCTGCTCTTGCGGTAAATC
TTTTAGCTGAGGAACGCGCA

Downstream 100 bases:

>100_bases
TTGTCTTCGCTCGGATCGTGAGAATGGGCTTCATACCTTGGGTGTGAGGCTCTTTTTCGGGCCGAGGTGGTTTGATGGTG
GCCTCTATGACGCGTTCCGT

Product: NifU domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MLNPAEKIVEKAPEEGAAEVVSDAVAAARRQLIAETIESIRPNLQRDKGDCELIDVQGDKVFVKMTGACVGCQLSSMTLN
GVQAKLVEATGRMIRVIPVSPNLPKL

Sequences:

>Translated_106_residues
MLNPAEKIVEKAPEEGAAEVVSDAVAAARRQLIAETIESIRPNLQRDKGDCELIDVQGDKVFVKMTGACVGCQLSSMTLN
GVQAKLVEATGRMIRVIPVSPNLPKL
>Mature_106_residues
MLNPAEKIVEKAPEEGAAEVVSDAVAAARRQLIAETIESIRPNLQRDKGDCELIDVQGDKVFVKMTGACVGCQLSSMTLN
GVQAKLVEATGRMIRVIPVSPNLPKL

Specific function: Involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins [H]

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007419
- InterPro:   IPR016217
- InterPro:   IPR010238
- InterPro:   IPR001075
- InterPro:   IPR002871
- ProDom:   PD002830 [H]

Pfam domain/function: PF04324 Fer2_BFD; PF01106 NifU; PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 11343; Mature: 11343

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNPAEKIVEKAPEEGAAEVVSDAVAAARRQLIAETIESIRPNLQRDKGDCELIDVQGDK
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCE
VFVKMTGACVGCQLSSMTLNGVQAKLVEATGRMIRVIPVSPNLPKL
EEEEECCCEECCEECCEECCCHHHHHHHHCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MLNPAEKIVEKAPEEGAAEVVSDAVAAARRQLIAETIESIRPNLQRDKGDCELIDVQGDK
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCE
VFVKMTGACVGCQLSSMTLNGVQAKLVEATGRMIRVIPVSPNLPKL
EEEEECCCEECCEECCEECCCHHHHHHHHCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2644218; 3040672; 7947754; 10819462 [H]